Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c18f
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 206 9e-54
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 206 9e-54
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 206 9e-54
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 206 9e-54
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 206 9e-54
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 94 6e-20
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 94 6e-20
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 32 0.28
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 31 0.48
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 30 1.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 1.5
At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta... 30 1.5
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 29 2.0
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 29 2.0
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 2.6
At2g41190.1 68415.m05087 amino acid transporter family protein l... 29 2.6
At5g42720.1 68418.m05203 glycosyl hydrolase family 17 protein si... 29 3.4
At1g61790.1 68414.m06968 OST3/OST6 family protein weak similarit... 29 3.4
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 3.4
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 28 4.5
At2g31040.1 68415.m03786 ATP synthase protein I -related contain... 28 4.5
At4g36550.1 68417.m05190 U-box domain-containing protein low sim... 28 6.0
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 6.0
At5g38030.1 68418.m04581 MATE efflux family protein similar to r... 27 7.9
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 27 7.9
At2g29050.1 68415.m03531 rhomboid family protein contains PFAM d... 27 7.9
At2g17820.1 68415.m02064 histidine kinase 1 99% identical to GP:... 27 7.9
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 206 bits (503), Expect = 9e-54
Identities = 97/144 (67%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Frame = +2
Query: 107 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 286
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 287 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 463
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 464 VGMILILIFAEVLGLYGLIVAIYL 535
VGMILILIFAE L LYGLIV I L
Sbjct: 131 VGMILILIFAEALALYGLIVGIIL 154
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 101 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 274
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 275 YGLVVAVLIA 304
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 206 bits (503), Expect = 9e-54
Identities = 97/144 (67%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Frame = +2
Query: 107 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 286
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 287 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 463
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 464 VGMILILIFAEVLGLYGLIVAIYL 535
VGMILILIFAE L LYGLIV I L
Sbjct: 131 VGMILILIFAEALALYGLIVGIIL 154
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 101 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 274
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 275 YGLVVAVLIA 304
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 206 bits (503), Expect = 9e-54
Identities = 97/144 (67%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Frame = +2
Query: 107 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 286
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 287 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 463
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 464 VGMILILIFAEVLGLYGLIVAIYL 535
VGMILILIFAE L LYGLIV I L
Sbjct: 131 VGMILILIFAEALALYGLIVGIIL 154
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 101 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 274
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 275 YGLVVAVLIA 304
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 206 bits (503), Expect = 9e-54
Identities = 97/144 (67%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Frame = +2
Query: 107 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 286
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 287 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 463
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 73 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 132
Query: 464 VGMILILIFAEVLGLYGLIVAIYL 535
VGMILILIFAE L LYGLIV I L
Sbjct: 133 VGMILILIFAEALALYGLIVGIIL 156
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 101 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 274
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 88 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 147
Query: 275 YGLVVAVLIA 304
YGL+V ++++
Sbjct: 148 YGLIVGIILS 157
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 206 bits (503), Expect = 9e-54
Identities = 97/144 (67%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Frame = +2
Query: 107 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 286
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 287 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 463
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 72 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 131
Query: 464 VGMILILIFAEVLGLYGLIVAIYL 535
VGMILILIFAE L LYGLIV I L
Sbjct: 132 VGMILILIFAEALALYGLIVGIIL 155
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 101 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 274
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 275 YGLVVAVLIA 304
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 94.3 bits (224), Expect = 6e-20
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Frame = +2
Query: 113 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 292
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 25 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 84
Query: 293 VLIAGALQEPANYPLYK------GFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 454
+++ L+ + +Y G+ +G+ VGF+ L G +GI+G + AQ
Sbjct: 85 IILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
Query: 455 RLFVGMILILIFAEVLGLYGLIVAIYL 535
LFV +++I IF LGL+G+IV I +
Sbjct: 145 TLFVKILVIEIFGSALGLFGVIVGIIM 171
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 94.3 bits (224), Expect = 6e-20
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Frame = +2
Query: 113 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 292
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 23 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 82
Query: 293 VLIAGALQEPANYPLYK------GFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 454
+++ L+ + +Y G+ +G+ VGF+ L G +GI+G + AQ
Sbjct: 83 IILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 142
Query: 455 RLFVGMILILIFAEVLGLYGLIVAIYL 535
LFV +++I IF LGL+G+IV I +
Sbjct: 143 TLFVKILVIEIFGSALGLFGVIVGIIM 169
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 355 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHH 209
VD +V G+ G+ LE + + D D ++ HD +D HD HH
Sbjct: 283 VDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDHDHHHDHNHDHDHHHH 331
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAP 358
P+ +PT P KPA P P KPAP
Sbjct: 53 PKPKPAPTPPKPKPAPAPTPPKPKPAP 79
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL*RG*LAGSWRAPAIRTATTRP*MAIIP 259
P+ +PT P KP P P KPAP P + A + P + A T P P
Sbjct: 42 PKPTPAPTPPKPKPKPAPTPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTP 101
Query: 258 AMT 250
A T
Sbjct: 102 APT 104
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAP 358
P+ +PT P KP P P KPAP
Sbjct: 86 PKPKPAPTPPNPKPTPAPTPPKPKPAP 112
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAP 358
P+ +PT P KP P P KP P
Sbjct: 31 PKPAPAPTPPKPKPTPAPTPPKPKPKP 57
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAPK 355
P+ +PT P KPA P PT P PK
Sbjct: 97 PKPTPAPTPPKPKPAPAPA-PTPAPKPK 123
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAP 358
P A P MPMA P P P+ P+P
Sbjct: 78 PMPMAPPPMPMASPPMMPMTPSTSPSP 104
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAPKWMNP 343
P TP PT P P + P+ PT KP P P
Sbjct: 125 PSTPKPPTKP---PPSTPKPPTTKPPPSTPKP 153
>At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta
antigen-related contains weak similarity to C protein
immunoglobulin-A-binding beta antigen [Streptococcus
agalactiae] gi|18028989|gb|AAL56250
Length = 731
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1
Query: 529 DGDDKSVKTQYFSENKNKNHSDE*PRLLSSTTHACISHD-AYGETGSQTRESYSQTSTQV 353
DG+D S +T E +N++ D + + T + S D + + S + S S +S+
Sbjct: 246 DGEDSSSETDE-EEEENQDSEDNNTKD-NVTVESLSSEDPSSSSSSSSSSSSSSSSSSSD 303
Query: 352 DEPFVKGVVG 323
DE +VK VVG
Sbjct: 304 DESYVKEVVG 313
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAP 358
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 438 PRTPASPTMPMAKPAARPENPTAKPAP 358
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -2
Query: 441 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 340
VP TP PT P+ KP+ P P KP+P P+
Sbjct: 431 VPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPV 469
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -2
Query: 441 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 340
VP TP PT P+ KP+ P P +P+P P+
Sbjct: 442 VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPV 480
>At2g41190.1 68415.m05087 amino acid transporter family protein low
similarity to vesicular GABA transporter [Rattus
norvegicus] GI:2587061; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 536
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 107 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPV--VMAGIIAIYG 280
PFFG+M A + S L A A I R ++I+ SII V++G + Y
Sbjct: 467 PFFGLMMALIGSLLSILVAIIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYS 526
Query: 281 LVVAVL 298
V ++
Sbjct: 527 SVAKII 532
>At5g42720.1 68418.m05203 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 438
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -2
Query: 507 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNP 343
RP+ + I + T N P SPT P PAA P T P+ + P
Sbjct: 335 RPDLTMTYDIGLTKTTNYN--QTSMAPLSPTRPRLPPAAAPTRQTLPSPPQMILP 387
>At1g61790.1 68414.m06968 OST3/OST6 family protein weak similarity
to SP|Q13454 N33 protein {Homo sapiens}; contains Pfam
profile PF04756: OST3 / OST6 family
Length = 346
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 347 FIHLGAGLAVGFSGLAAGFAIGIVG--DAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 520
F + G+G+ +G G A GF +VG A V + + LI++ A + + +
Sbjct: 264 FFYQGSGMQLGAEGFAVGFLYTVVGLLLAFVTNVLVRVKNITAQRLIMLLALFISFWAVK 323
Query: 521 VAIYL 535
+YL
Sbjct: 324 KVVYL 328
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 444 AVPRTPASPTMPMAKPAARPENPTAKPAP 358
A P TP + P P PE+P + PAP
Sbjct: 132 APPTTPITSPSPPTNPPPPPESPPSLPAP 160
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 504 VFTDLSSPSTCTQNKRPEHTPLPSP 578
+F L++ + C N P+H P+PSP
Sbjct: 18 IFFTLTAATDCGCNPSPKHKPVPSP 42
>At2g31040.1 68415.m03786 ATP synthase protein I -related contains
weaks similarity to Swiss-Prot:P08443 ATP synthase
protein I [Synechococcus sp.]
Length = 350
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 419 GDAGV-RGTAQQPRLFVGMILILIF 490
G GV +G A QPRL V ++L++IF
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIF 291
>At4g36550.1 68417.m05190 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 577
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 435 RTPASPTMPMAKPAARPENPTAKPAPK 355
RT ASPT + P PE P+PK
Sbjct: 534 RTTASPTSQVVTPVTHPEPVKITPSPK 560
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -1
Query: 406 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHD 227
G+ E+ S+Q+ +P + + ++ N H Q VD NN DDR++ D
Sbjct: 8 GQVNLSGLETTPPGSSQLKKPDLHISMNMAMDSGHNNHHHHQEVD-NNNNDDDRDNLSGD 66
Query: 226 QLRP 215
P
Sbjct: 67 DHEP 70
>At5g38030.1 68418.m04581 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family; putative
multidrug efflux protein NorM - Vibrio parahaemolyticus,
EMBL:AB010463
Length = 498
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +2
Query: 86 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAK-SGTGI---AAMSVMRPELIMKSIIPVV 253
EN+ I G FGVM + + + G A+G K S G+ + ++ ++ S++ +
Sbjct: 88 ENSVIAGFSFGVMLGMGSALETLCGQAFGAGKLSMLGVYLQRSWVILNVTAVILSLLYIF 147
Query: 254 MAGIIAIYGLVVAV 295
A I+A G A+
Sbjct: 148 AAPILAFIGQTPAI 161
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 438 PRTPASPTMP--MAKPAARPENPTAKPAPKWM 349
P+ PA P P + P P+ PT KP P ++
Sbjct: 42 PKHPAKPPKPPTVKPPTHTPKPPTVKPPPPYI 73
>At2g29050.1 68415.m03531 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 389
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 136 CYHLQRLGSCLWNCQVRNWYC 198
C++L + + LW+C+ +N YC
Sbjct: 328 CHYLSCIPTSLWSCKSQNVYC 348
>At2g17820.1 68415.m02064 histidine kinase 1 99% identical to
GP:4586626
Length = 1207
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 427 CISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGT-SNQDSHDQTVDGNNTRHD 251
C S D+ ET + + S + + P +K +L++ T SN DS ++ N +
Sbjct: 966 CSSDDS-SETSGEKQVDKSVKPSTLHSPVLKN---YLIDATTSNDDSTSASMTQKNPEEE 1021
Query: 250 DRNDRLH 230
D DRL+
Sbjct: 1022 DWKDRLY 1028
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,137,269
Number of Sequences: 28952
Number of extensions: 336017
Number of successful extensions: 1217
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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