Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c12r
(696 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131... 33 0.29
07_01_0975 + 8223269-8224354 32 0.38
03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594 32 0.38
02_05_0159 - 26368562-26369239,26371374-26371853 32 0.50
06_01_0814 - 6163155-6163591,6163729-6164038 31 0.66
03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399 31 0.66
04_01_0229 - 2897484-2900402 31 0.87
11_08_0006 - 27548581-27549177 31 1.2
04_01_0460 + 5954548-5954816,5954940-5954997 31 1.2
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 31 1.2
03_06_0118 + 31795050-31796404,31796513-31797083 30 1.5
11_04_0139 - 13938923-13939352,13939580-13939720,13939754-13939779 30 2.0
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 30 2.0
04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851... 30 2.0
10_08_0439 - 17926021-17927133 29 2.7
07_01_0032 + 258788-259201,259297-259462,260938-261443 29 2.7
06_03_0671 + 23348958-23349101,23349475-23349834,23350003-233503... 29 2.7
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 29 2.7
12_02_0306 + 17307166-17309091 29 3.5
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 29 3.5
10_01_0311 + 3441911-3443035 29 3.5
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 29 4.7
01_06_0060 + 26068792-26069363,26069525-26070209 29 4.7
11_04_0235 - 15209003-15211187,15212242-15212319,15212743-15213527 28 6.2
10_01_0020 + 239026-239514 28 6.2
08_02_1023 - 23710825-23710950,23711037-23711120,23711367-237114... 28 6.2
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 28 6.2
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 28 6.2
01_06_0644 + 30821811-30821855,30822707-30822976,30823079-308243... 28 6.2
01_01_1192 + 9511961-9512977,9513860-9514078 28 6.2
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 28 8.1
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 28 8.1
>03_06_0014 -
31012116-31012229,31012773-31012985,31013058-31013171,
31013909-31014040,31014624-31014692,31014763-31015017,
31015347-31015520,31016104-31016280,31016999-31017107,
31017343-31017506,31018221-31018517
Length = 605
Score = 32.7 bits (71), Expect = 0.29
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Frame = +2
Query: 194 GDGAIDNNHGLSNDFGFVNDNHGLRDNG-----IDTGSGDNRGRASLV-DVQNDLHERSA 355
GDG + L++ V + +GL DNG + G G+++G + + +++ D H+
Sbjct: 66 GDGGQLQDRRLASPAAEVVEEYGLEDNGHGGDQWEEGQGESQGSSGMAQEIEGDSHD--- 122
Query: 356 VSNGGKRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYK 535
V G + V+ G N +G + E+++D D+D
Sbjct: 123 VELGNQSTQVHMKGVN------TAEGGHVKRTITSETRSTENEEDHEVLHDAFDDNDEDG 176
Query: 536 VVDDGSRSGNAGTHQALL 589
+ GSR N H++L+
Sbjct: 177 LAPYGSRDDNKHAHESLM 194
>07_01_0975 + 8223269-8224354
Length = 361
Score = 32.3 bits (70), Expect = 0.38
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +3
Query: 357 SATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTK 536
S G+ G T GP ++ +GP E S+S +GP E G + S AGP A G
Sbjct: 271 SPAGSPAGGPTAGGPASGPSSYGAASGPAEGPSSSGAASGPAE-GPSPSGAAGP-AEGPS 328
Query: 537 SSMMGAGPA 563
S GP+
Sbjct: 329 SYGSTEGPS 337
>03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594
Length = 323
Score = 32.3 bits (70), Expect = 0.38
Identities = 52/179 (29%), Positives = 66/179 (36%), Gaps = 6/179 (3%)
Frame = +2
Query: 44 PESGHGGHVDIDRYSVKGLRKSDSGCGNDGSR--DDHWLGSNGSNVSNLDRLGDGA--ID 211
P G ++S G SG G R DD + G V DR G G
Sbjct: 147 PGGGRSARYSSSKFSAGGRGDRFSGSDRFGDRYMDDRYDGGYREPVDVRDRYGGGRDRYA 206
Query: 212 NNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVD-VQ-NDLHERSAVSNGGKRRVV 385
N+ S +V D +G D + G R R+ D V+ N ++RS GG
Sbjct: 207 NDRYPSGGDRYVPDRYGGPDRYQPSSYGRERERSYERDGVRGNGGYDRSGPRGGGS---- 262
Query: 386 YDSGSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYKVVDDGSRSG 562
YD +G R + +G R VD G G YDG S DR D SR G
Sbjct: 263 YDR--DGPRGGISGGYDRDGPRGGGVDRY---GGGGPARYDGGSYRDRSGPYDRPSRGG 316
>02_05_0159 - 26368562-26369239,26371374-26371853
Length = 385
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 369 ARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMM 548
A GG ++AG T I T +++ G G SL +E+G ++ G + S++
Sbjct: 297 AAGGDDSLAGKTTIETCTASPGGGAAAGGASLEAVQWSELGLEELVLRGSKPVHVSCSIV 356
Query: 549 GAGPATPGL 575
G GL
Sbjct: 357 TGGGGDEGL 365
>06_01_0814 - 6163155-6163591,6163729-6164038
Length = 248
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 350 SAVSNGGKRRVVYDSGSNGDRYELVDD-GRPNGDRFEFVDNGR 475
+ +N RR+ G+ RY++VD+ G +GD ++ D+GR
Sbjct: 50 ATATNAASRRLYNTEGAPLRRYDVVDESGTDSGDEYDATDDGR 92
>03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399
Length = 146
Score = 31.5 bits (68), Expect = 0.66
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Frame = +2
Query: 368 GKRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGR----SDGNGLELIYDGRSDSDRYK 535
GKR V G G ++ ++DGR + R ++G E GRS +
Sbjct: 23 GKRMTVAP-GVLGQDWKQIEDGRRRPVAVSYSHGRRLRCIAEGRREEEEEVGRSRRGKDL 81
Query: 536 VVDDGSRSGNAGTHQALLRAGTHQALSRAGDSNGHHGSEGQ 658
+DD G TH L AG + R G +G GQ
Sbjct: 82 DLDDMRGYGETATHHGLRLAGREEVSPRGGKPRVDNGGRGQ 122
>04_01_0229 - 2897484-2900402
Length = 972
Score = 31.1 bits (67), Expect = 0.87
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 10/180 (5%)
Frame = +2
Query: 71 DIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDF---- 238
D + VK + S+ N S DH G+ N G+G N LSN+F
Sbjct: 490 DHSSHHVKWIGTSNKDLTNKSS--DHVEGNESDLNDNSSGHGEGIGSGNKHLSNNFLNHV 547
Query: 239 ---GF-VNDNHGLRDNGIDTGSGD--NRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGS 400
GF +NDN + GI +G D N+ + + DL + + R + SG
Sbjct: 548 EGIGFDLNDNSSDHEEGIGSGKKDMMNKSLDRVEGISFDLRDNYS------RDETFGSGR 601
Query: 401 NGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTHQ 580
+ +D G + DN S G+ Y G S++ ++G RSGN + Q
Sbjct: 602 KDTSNKSLD--HVEGIEPDLRDN--SSGDETFASY-GEDMSNKSSDHEEGIRSGNKSSDQ 656
>11_08_0006 - 27548581-27549177
Length = 198
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +2
Query: 155 GSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHG---LRDNGIDTGSGDNRGRASLVD 325
G++G ++D + +G + N ++ V DN G DN D+G G++ +D
Sbjct: 98 GNDGGR--SIDGIDEGRVCNRQTQASRS--VADNRGDDSRTDNNDDSGGGESN--VGGID 151
Query: 326 VQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGD 448
+ +H R A ++G D G G R + D GR N D
Sbjct: 152 -EGRMHHRRARASGSVADDCGDDGGGGGRGDDGDGGRCNDD 191
>04_01_0460 + 5954548-5954816,5954940-5954997
Length = 108
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 116 GCGNDGSRDDHWLGSNGSNVSNLDRLGDG-AIDNNHGLSNDFGFVNDNHGLRDNGIDTGS 292
G G +D+ GS + + +G G ++DN+H + D NHG D G TG+
Sbjct: 29 GTGTTAEQDNTG-GSTSAKHTLPQAVGSGTSVDNHHAIPRD---QYSNHGGDDGGGSTGT 84
Query: 293 GD 298
GD
Sbjct: 85 GD 86
>02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +2
Query: 263 LRDNGIDTGSGDNRGRASLVDVQND---LHERSAVSNGGKRRVVYDSGSNGDRYELVDDG 433
L+ + +GS D+ A VD+++D + E + V + D + D + VD+G
Sbjct: 859 LKGSRRQSGSDDDEDDAC-VDIEDDDETIVEDAEVGDTDSTADGLDEEMDDDSADEVDEG 917
Query: 434 RPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYKVVDD 547
+ D E V + DG+G E+ DG DSD +DD
Sbjct: 918 QD--DLKESVAHESKDGDGAEVTKDG-DDSDDSDGMDD 952
>03_06_0118 + 31795050-31796404,31796513-31797083
Length = 641
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 368 GKRRVVYDSGSNG--DRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYKVV 541
G+ +VYD NG D+Y D +P D + NGR GL +YD +D VV
Sbjct: 420 GELILVYDYMPNGSLDKYLYDDKNKPTLDWTQSEMNGRLGDFGLARLYDHGADPQTTHVV 479
>11_04_0139 - 13938923-13939352,13939580-13939720,13939754-13939779
Length = 198
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 420 SSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPGLTRPY*GPG 599
+S+M G +GS A P + +S +G TA+ + +S + A+ GL + G G
Sbjct: 110 ASSMGGAAMLGSGKTATASPAGGSNTASQGSGKTAVASHAS--ESSTASQGLQKTAGGGG 167
Query: 600 LTR 608
R
Sbjct: 168 FAR 170
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 357 SATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGP-TEMGSNSSMMAGPTAIGT 533
S TGA G + A + STM + SN+ + +G + GSN+ ++G +
Sbjct: 403 SVTGANSGSYSSAWSNSNSNSGSTMPSGIGVASNAGSSSGSWSNAGSNTGTLSGAGSSNW 462
Query: 534 KSSMMGA 554
SS G+
Sbjct: 463 SSSTSGS 469
>04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164,
35385254-35385372,35385701-35385811,35386068-35386595,
35386702-35386881,35386957-35387556,35387646-35388066,
35388183-35388280,35388372-35389260,35389366-35389544,
35389647-35389763,35389862-35389952,35390578-35390753
Length = 1901
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/127 (25%), Positives = 51/127 (40%)
Frame = +2
Query: 191 LGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGG 370
LG A+D+ +S D G +D D+ + S D G L D+ + S +SN
Sbjct: 1787 LGVVAMDDPDEISGDAGDTDDE----DDDDNDDSED--GIIPLTDIGDS---DSDISNSS 1837
Query: 371 KRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYKVVDDG 550
D G + + + D+ + D EF+D G +G G L G D D ++
Sbjct: 1838 ------DDGGDDEDIDSGDENDDDDDDAEFIDEGDFEGGGGLLEIMGEEDGDESDIMGSF 1891
Query: 551 SRSGNAG 571
S G
Sbjct: 1892 SSGDEEG 1898
>10_08_0439 - 17926021-17927133
Length = 370
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 357 SATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGT 533
+AT A + A PT+ ++S+ + +++ + +M GP + ++ M +A GT
Sbjct: 70 TATSASAAAAAAASPTQSSSSSAATSPSSDLSAFLNSMLGPLNLRTDERMPGTTSAAGT 128
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +3
Query: 402 TEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMG----AGPATP 569
T ++ A PT+ S+S + +++ + + M GP + T M G AG ATP
Sbjct: 72 TSASAAAAAAASPTQSSSSSAATSPSSDLSAFLNSMLGPLNLRTDERMPGTTSAAGTATP 131
>07_01_0032 + 258788-259201,259297-259462,260938-261443
Length = 361
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 381 LSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGP 560
L+ ++G IG + A T + SNS + GPT + ++ + G +G +++ P
Sbjct: 189 LAVLSGAHTIG-KAHCSAFSTRLYSNSSSNGGPTLDANYTTALRGQCKVGDVDTLVDLDP 247
Query: 561 ATP 569
TP
Sbjct: 248 PTP 250
>06_03_0671 +
23348958-23349101,23349475-23349834,23350003-23350302,
23350399-23350488,23353290-23353766
Length = 456
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 227 SNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDL-HERSAVSNGGKRRVVYDSGSN 403
S G V D L ++ +GD G + Q +L H +S S G RRV D G +
Sbjct: 322 SGSSGLVWDERFLTEDAEAAKAGDGDGGGGTEEPQPELRHSKSVGSIGMMRRVAADDGDD 381
Query: 404 GDR 412
++
Sbjct: 382 SEK 384
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 266 RDNGIDTGSGDNRGRASLVDVQNDLHERSAVSN 364
R G G G RGR++L + D HE SA+S+
Sbjct: 1038 RGGGGRRGRGRGRGRSALAENDMDFHETSALSS 1070
>12_02_0306 + 17307166-17309091
Length = 641
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +3
Query: 348 GVLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAI 527
G+L GARGG G T +G + AG ++GS SLT G + + +
Sbjct: 343 GILCGGGARGGARDGVGVTLVGVGAG--AG-ADVGS-SLTGGGDGTLCGGGARGGARDGV 398
Query: 528 GTKSSMMGAG 557
G + +GAG
Sbjct: 399 GVTVTGVGAG 408
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +3
Query: 348 GVLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAI 527
G+L GARGG G T G + AG +GS SLT G + + +
Sbjct: 81 GILCGGGARGGARDGVGVTVTGVGAGAGAG---VGS-SLTGDGGGTLCGGGARGGARDGV 136
Query: 528 GTKSSMMGAG 557
G + + GAG
Sbjct: 137 GVRLTGGGAG 146
>11_03_0031 -
9094643-9095824,9095945-9096034,9096141-9096216,
9096759-9096976,9097283-9097512,9097617-9097683,
9097863-9098048,9098164-9098295,9098380-9098492,
9098771-9098777
Length = 766
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 520 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 398
+G IDE+ I PA+ F+P+ V VDE + I G
Sbjct: 247 IGATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIGILKG 288
>10_01_0311 + 3441911-3443035
Length = 374
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 357 SATGARGGLSTIAG-PTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIG 530
+A GA GG+ +A P +G + P G ++ P +MG ++++ P A+G
Sbjct: 235 AAAGALGGVGAVAPLPGAVGGAGAVAPLPGAAGGDAAAAPLPGDMGGDAALAPLPGALG 293
>10_08_0584 +
18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +3
Query: 465 TMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPGLTRPY*GPGLT--RPLVGP 623
T G + G GP T++ + A P PG P GPG T RP + P
Sbjct: 825 TRPGREQGGEAPEPNDGPRPPTTRAGPLPACPTVPGAPDPQDGPGATAGRPRLSP 879
>01_06_0060 + 26068792-26069363,26069525-26070209
Length = 418
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 519 TAIGTKSSMMGAGPATPGLTRPY*GPGLTRPL 614
TA GT+ + + A A P Y GPG+ RP+
Sbjct: 227 TAAGTEGTFLCAAHAGPDCVMVYSGPGVERPV 258
>11_04_0235 - 15209003-15211187,15212242-15212319,15212743-15213527
Length = 1015
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 236 FGFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDRY 415
+ F+ +NH LR N ++ R ++ D HER +++GG + + G+ Y
Sbjct: 18 YTFLQENHELRRN-LEHDIRYIRNELRMIGAVIDEHERGQMNHGGPLQGAWIHGARELAY 76
Query: 416 ELVD 427
++ D
Sbjct: 77 DMED 80
>10_01_0020 + 239026-239514
Length = 162
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 482 RRTCHCQRIRTYLRWAC 432
R +CHCQR++ LRW C
Sbjct: 90 RSSCHCQRVK--LRWFC 104
>08_02_1023 -
23710825-23710950,23711037-23711120,23711367-23711492,
23711593-23711712,23712046-23712153,23712243-23712395,
23712505-23712600,23712716-23712800,23713278-23714268,
23714870-23714915,23715806-23715964,23716516-23716651,
23716734-23716900,23717366-23717696,23717827-23718062,
23718326-23718514
Length = 1050
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 269 DNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGD 409
D+G D GD+ +L + + + E S N R VV NGD
Sbjct: 586 DSGKDDSDGDSGKEHTLPNGNSKMQENSLKDNSHARSVVVKGKENGD 632
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 520 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 398
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 370 IGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRG 411
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +3
Query: 381 LSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSN-SSMMAGPTAIGTKSSM--MG 551
LS + +G ++ + T+ SN T++ PT M N SS M+ P+ S++ G
Sbjct: 325 LSGNGSASGLGASNDIFSALTQPKSNVSTLSFPTSMAPNSSSFMSTPSGSQNLSNLAQFG 384
Query: 552 AGPATPGLTRPY*GPGLTRPLVGP 623
+ P ++ P T P+ P
Sbjct: 385 SQQGIPTVSSGGSQPQQTHPITKP 408
>01_06_0644 +
30821811-30821855,30822707-30822976,30823079-30824383,
30824551-30824692,30824752-30825275
Length = 761
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 266 RDNGIDTGSGDNRGRASLVDVQNDLHERSAVSN 364
R G G G RGR++L + D HE SA S+
Sbjct: 25 RGGGGRRGRGRGRGRSALAENDMDFHETSAPSS 57
>01_01_1192 + 9511961-9512977,9513860-9514078
Length = 411
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +2
Query: 80 RYSVKGLRKSDSGC-GNDG----SRDDHWLGSNGSNVSNLDRLG 196
R + K KSD G G+DG S DHW G NG + + R G
Sbjct: 331 RSTTKQWLKSDDGLIGDDGMAGRSYPDHWKGENGLYCAGMVRRG 374
>12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 520 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 398
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 889 IGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIEILRG 930
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 27.9 bits (59), Expect = 8.1
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +2
Query: 101 RKSDSGCGNDGSRDDHWLGS-NGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNG 277
R ++ G DGS +D LGS +GSN S G G N G +N ++ + G +
Sbjct: 204 RDGNTSDGGDGSWNDGGLGSGSGSNSS----YGHGNSTNGAGGANMNNIIHSS-GTSSSA 258
Query: 278 IDTG---SGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNG 406
D+ SG+N + ++ H + +G R + ++G NG
Sbjct: 259 NDSSRRISGNNNWNNNGRSAGSN-HNAAGSGDGSNRNLWNNNGRNG 303
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,665,423
Number of Sequences: 37544
Number of extensions: 340011
Number of successful extensions: 1532
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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