Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c12r
(696 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19450.1 68415.m02272 diacylglycerol O-acyltransferase / acyl... 35 0.045
At3g18810.1 68416.m02389 protein kinase family protein contains ... 34 0.078
At2g11005.1 68415.m01177 glycine-rich protein 34 0.078
At3g43530.1 68416.m04621 hypothetical protein contains Pfam prof... 34 0.10
At1g07730.2 68414.m00834 disease resistance-responsive family pr... 34 0.10
At2g27660.1 68415.m03352 DC1 domain-containing protein contains ... 32 0.32
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 32 0.32
At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing ... 31 0.55
At4g30600.1 68417.m04341 signal recognition particle receptor al... 31 0.55
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do... 31 0.55
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 31 0.96
At3g48470.1 68416.m05291 expressed protein 30 1.3
At4g30935.1 68417.m04392 WRKY family transcription factor contai... 30 1.7
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 30 1.7
At3g28790.1 68416.m03593 expressed protein 30 1.7
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 29 2.2
At1g78880.1 68414.m09195 balbiani ring 1-related / BR1-related c... 29 2.2
At4g00340.1 68417.m00045 S-locus glycoprotein family protein / c... 29 2.9
At3g57780.1 68416.m06436 expressed protein 29 2.9
At3g29080.1 68416.m03641 hypothetical protein 29 2.9
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 29 3.9
At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing ... 29 3.9
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 29 3.9
At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule ubiq... 29 3.9
At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical... 29 3.9
At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4)... 29 3.9
At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4)... 29 3.9
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 28 5.1
At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH) domain... 28 5.1
At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH) domain... 28 5.1
At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH) domain... 28 5.1
At2g42320.1 68415.m05238 nucleolar protein gar2-related contains... 28 5.1
At2g28670.1 68415.m03485 disease resistance-responsive family pr... 28 5.1
At2g09910.1 68415.m01029 hypothetical protein 28 5.1
At5g56890.1 68418.m07099 protein kinase family protein contains ... 28 6.8
At4g29230.1 68417.m04181 no apical meristem (NAM) family protein... 28 6.8
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 28 6.8
At5g61100.1 68418.m07666 hypothetical protein 27 9.0
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 27 9.0
At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF052... 27 9.0
>At2g19450.1 68415.m02272 diacylglycerol O-acyltransferase / acyl
CoA:diacylglycerol acyltransferase (DGAT) identical to
gi:5050913, gi:6625553
Length = 520
Score = 35.1 bits (77), Expect = 0.045
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 47 ESGHGGHVDIDRYSVKGLRK-SDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHG 223
E+G G VD+DR + R S +G GS ++ G+ DR+ D+ G
Sbjct: 14 ENGGGEFVDLDRLRRRKSRSDSSNGLLLSGSDNNSPSDDVGAPADVRDRIDSVVNDDAQG 73
Query: 224 LSNDFGFVNDNHGLRDNGIDTGSGDNRGRA 313
+N G ++N G +NG G G+ RG A
Sbjct: 74 TANLAG--DNNGGGDNNGGGRGGGEGRGNA 101
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 34.3 bits (75), Expect = 0.078
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 107 SDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFV-NDNHGLRDNGID 283
S S G+ ++ N +N +N + G+ DNN+G + D N+N+G +NG D
Sbjct: 61 SQSPPSPQGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGND 120
Query: 284 TGSGDNRGRASLVDVQND 337
+N G + + QN+
Sbjct: 121 NNGNNNNGNNNDNNNQNN 138
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/75 (25%), Positives = 40/75 (53%)
Frame = +2
Query: 77 DRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDN 256
D S + +++ GN+G+ ++ +N N +N + G+ +NN+G +N+ N+N
Sbjct: 60 DSQSPPSPQGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNN---GNNN 116
Query: 257 HGLRDNGIDTGSGDN 301
+G +NG + +N
Sbjct: 117 NGNDNNGNNNNGNNN 131
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +2
Query: 95 GLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDN 274
G +D+ N+G+ ++ +NG+N N + + +NN+G N+ N N+ +N
Sbjct: 78 GNNNNDNNNNNNGNNNND--NNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNN 135
Query: 275 GIDTGSGDNR 304
+ G +NR
Sbjct: 136 QNNGGGSNNR 145
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 47 ESGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGL 226
+ +G + + + + G +D+ GN+ +++ +NG+N + D G +NN+G
Sbjct: 74 DGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNG----NNNNGN 129
Query: 227 SNDFGFVNDNHG 262
+ND N N+G
Sbjct: 130 NNDNN--NQNNG 139
>At2g11005.1 68415.m01177 glycine-rich protein
Length = 170
Score = 34.3 bits (75), Expect = 0.078
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 149 WLGS-NGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVD 325
W GS +G GDG+ + G S D G D+ G D+ GSGD+ G
Sbjct: 9 WFGSGDGGGSGGGGGSGDGSGSGDGGGSGDGGGSRDSDGSGDSS-GGGSGDSGGFGD--- 64
Query: 326 VQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDG 433
+D + S+ S+GG R SG NG+ DDG
Sbjct: 65 -NSDNNSVSSDSSGGGSRDGGGSGDNGN----TDDG 95
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = +2
Query: 50 SGHGGHVDIDRYSVKGLRKSDSGCGNDG--SRDDHWLG-SNGSNVSNLDRLGDGAIDNNH 220
SG GG S G D G DG SRD G S+G + GD + +N+
Sbjct: 12 SGDGGGSGGGGGSGDGSGSGDGGGSGDGGGSRDSDGSGDSSGGGSGDSGGFGDNSDNNSV 71
Query: 221 GLSNDFGFVNDNHGLRDNG 277
+ G D G DNG
Sbjct: 72 SSDSSGGGSRDGGGSGDNG 90
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 122 GNDGSRDDHWLGSNG-SNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGD 298
G GS D G G S R DG+ D++ G S D G DN D+ G
Sbjct: 20 GGGGSGDGSGSGDGGGSGDGGGSRDSDGSGDSSGGGSGDSGGFGDNSDNNSVSSDSSGGG 79
Query: 299 NR 304
+R
Sbjct: 80 SR 81
>At3g43530.1 68416.m04621 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 615
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +2
Query: 284 TGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDR-YELVDDGRPNGDRFEF 460
TG+ D G + D +N+L E S + G R V + + D+ D+ R G++
Sbjct: 411 TGTDDAYGSKEIDDRENELEEGSDANGGDNEREVREKETEIDKEVAQGDNEREVGEKETE 470
Query: 461 VDNGRSDGNGLELIYDGRSDSDRYKVVDDGS 553
+D + G G I+DG D + K V + +
Sbjct: 471 ID--KEVGQGDSDIFDGNKDMELNKEVAEST 499
>At1g07730.2 68414.m00834 disease resistance-responsive family
protein contains Pfam PF03018: Plant disease resistance
response protein
Length = 389
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +3
Query: 348 GVLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAI 527
G SA+G G L T GP + T S++ P S +L + GP + ++S ++ G ++
Sbjct: 66 GTGSASGGLGSLGTNTGPGPLSTTGSSLL-PV-ASSGTLPVTGPGPLPTSSGLLPGASSG 123
Query: 528 GTKSSMMGAGP 560
S G+GP
Sbjct: 124 NLPGS--GSGP 132
>At2g27660.1 68415.m03352 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 718
Score = 32.3 bits (70), Expect = 0.32
Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 1/143 (0%)
Frame = +2
Query: 134 SRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRA 313
+R + + N N G +NN G + G N + L G GSG N G A
Sbjct: 222 TRPNRTINPNRPIAQNAAVNGPRRQNNNLGYNAQVG-PNGPNELTGQGSMDGSGYN-GSA 279
Query: 314 SLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGRS-DGNG 490
S + + D+ V V + GD Y V++ G+ + D G DGNG
Sbjct: 280 SATNKEFDVDVDVDVDVDVDVDVDVEVEYEGDVY--VEEANDEGEDVDGNDEGEDVDGNG 337
Query: 491 LELIYDGRSDSDRYKVVDDGSRS 559
LE++ + S Y D GS S
Sbjct: 338 LEIVACVDNLSVAYSESDFGSSS 360
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 122 GNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDN 301
GND DD NG++ N + +++ N S + G N++H + +NG G DN
Sbjct: 198 GNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESG--NEDHSMEENGSGVGE-DN 254
>At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing
protein Dof zinc finger protein, Oryza sativa,
EMBL:AB028129
Length = 372
Score = 31.5 bits (68), Expect = 0.55
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +2
Query: 152 LGSNGSNVS--NLDRLGDGAIDNNH--GLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASL 319
+G N N+ N GD +NH GL++ G N+N+ NGI TG N G L
Sbjct: 217 MGVNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGG--GL 274
Query: 320 VDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPN 442
+D+ +R +SN Y+ + R + D +PN
Sbjct: 275 MDIST--CQRLMLSNYDHHH--YNHQEDHQRVATIMDVKPN 311
>At4g30600.1 68417.m04341 signal recognition particle receptor alpha
subunit family protein similar to Signal recognition
particle receptor alpha subunit (SR-alpha) (Docking
protein alpha) (DP-alpha) (SP:P08240) [Homo sapiens};
similar to Signal recognition particle receptor alpha
subunit (SR-alpha) (Docking protein alpha) (DP-alpha)
(SP:P06625) [Canis familiaris}; contains Pfam PF04086:
Signal recognition particle, alpha subunit, N-terminal;
contains Pfam PF00448: SRP54-type protein, GTPase domain
Length = 634
Score = 31.5 bits (68), Expect = 0.55
Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 7/150 (4%)
Frame = +2
Query: 131 GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGR 310
GS+ D G N + VS L +G + NH + +D ND ++N + D
Sbjct: 163 GSKKDDGDGGNKAKVSTLT---NGHSNGNHQMEDDSQETNDLANGKENTSSNVAVDLSKL 219
Query: 311 ASL--VDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELV-DDGRPNGDRFEFVD----N 469
L V+ R S G K V + + V DD P + +F D N
Sbjct: 220 QKLRSKGVRGRGGVRKTDSIGNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDEN 279
Query: 470 GRSDGNGLELIYDGRSDSDRYKVVDDGSRS 559
G +D + G S D+ +V S S
Sbjct: 280 GNNDHVDIVAADQGESMMDKEEVFSSDSES 309
>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
domain-containing protein contains Pfam profiles
PF02170: PAZ domain, PF02171: Piwi domain
Length = 1194
Score = 31.5 bits (68), Expect = 0.55
Identities = 33/102 (32%), Positives = 36/102 (35%), Gaps = 6/102 (5%)
Frame = +2
Query: 38 RAPESGHGGHVDIDR-YSVKGL---RKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGA 205
R G GG D R YS +G R D G G D H G G GDG
Sbjct: 10 RGDGRGRGGGGDRGRGYSGRGDGRGRGGDGDRGYSGRGDGHGRGGGGDRGRGYSGRGDGR 69
Query: 206 IDNNHG-LSNDFGFVNDNHGLRDNGIDTGSG-DNRGRASLVD 325
G + D HG R G D G G RGR + D
Sbjct: 70 GRGGGGDRGRGYSGRGDGHG-RGGGGDRGRGYSGRGRGFVQD 110
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 32 RLRAPESGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLG 157
RL + G GG D + +G +SDS G+D DD W G
Sbjct: 58 RLDSSCGGFGGEAD-SLVAEQGSSRSDSVAGDDSEEDDDWEG 98
>At3g48470.1 68416.m05291 expressed protein
Length = 1017
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/102 (25%), Positives = 44/102 (43%)
Frame = +2
Query: 272 NGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDR 451
N ++ G G+N+ ASL +V N+ R+ K + + + D E+VD N D
Sbjct: 524 NTMENGDGENKRSASLTEV-NESSRRNKQKENRKSKNI-SAFVLADPNEIVDLATLNCDT 581
Query: 452 FEFVDNGRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTH 577
D+G D + + + + Y ++DD G TH
Sbjct: 582 ESDKDDGDDDAS-VSSDNSSVTSLEPYDLMDDDKDLGKQFTH 622
>At4g30935.1 68417.m04392 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 466
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -3
Query: 466 VNEFEPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPLVQIILNINQASSAPIV 296
V E + P++ ++V P + +P A A PLV + Q S +P+V
Sbjct: 98 VEENRQVETSPSLAASSDSLTVTPCLSLDPATASTAQDLPLVSVPTKQEQRSDSPVV 154
>At4g15180.1 68417.m02328 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 2326
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 454 EPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPL 344
EP+ VG A +E + V I D PP P+A + L
Sbjct: 591 EPVQVGEAPTEELPSMEVDMDICDTPPHEPMASDSSL 627
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +3
Query: 342 TRGVLSATGAR---GGLSTIAGP-TEIGTNSSTMAGPTEI--GSNSLTMAGPTEMGSNSS 503
++G S +G+ G + T G TE G+ SS+ A E+ GS+ T T S +S
Sbjct: 215 SQGTSSKSGSESTAGSIETNTGSKTEAGSKSSSSAKTKEVSGGSSGNTYKDTTGSSSGAS 274
Query: 504 MMAGPTAIGTKSSMMGAGPATPGLTRP 584
PT + + P+TP + P
Sbjct: 275 PSGSPTPTPSTPTPSTPTPSTPTPSTP 301
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 463 NEFEPISVGPAIVDEFVP--ISVGPAIVDNPPLAPVADSTPLVQIILNINQASSA 305
N E I+ A ++E V ++GP ++ + A S P +++I NINQ SA
Sbjct: 573 NLMEEIASVEADIEEIVKRRCAIGPPSLEEASSSSPASSVPEMRLIRNINQLESA 627
>At1g78880.1 68414.m09195 balbiani ring 1-related / BR1-related
contains weak similarity to BR1 [Chironomus tentans]
gi|7042|emb|CAA45607
Length = 468
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/91 (26%), Positives = 36/91 (39%)
Frame = +3
Query: 351 VLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIG 530
V +ATG G AG + T +GP L + + G + +GP I
Sbjct: 81 VPNATGRMSGNLASAGSNSM---KKTNSGPLSKHGEPLKKSSGPQSGGVTRQNSGPIPIL 137
Query: 531 TKSSMMGAGPATPGLTRPY*GPGLTRPLVGP 623
+ ++ +GP T G P G R + GP
Sbjct: 138 PTTGLITSGPITSG---PLNSSGAPRKISGP 165
>At4g00340.1 68417.m00045 S-locus glycoprotein family protein /
curculin-like (mannose-binding) lectin family protein /
PAN domain-containing protein contains Pfam profiles:
PF01453 lectin (probable mannose binding), PF00954
S-locus glycoprotein family, PF00024 PAN domain
Length = 402
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 329 QNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGD 448
+ND RS + G RR DSG D +E V D R +GD
Sbjct: 307 RNDAAWRSDDYSDGCRRENGDSGEKSDTFEAVGDLRYDGD 346
>At3g57780.1 68416.m06436 expressed protein
Length = 670
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 59 GGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGS 160
G + R SV GL + CGND SR WL +
Sbjct: 227 GKRATVARNSVSGLILAAKSCGNDVSRLTFWLSN 260
>At3g29080.1 68416.m03641 hypothetical protein
Length = 445
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 387 TIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNS 500
T +G TEIG ++ ++ +GS + T PT GS +
Sbjct: 321 TASGQTEIGVSTRCISTSVVVGSEATTNTEPTTTGSRT 358
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 520 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 398
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 406 IGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKG 447
>At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing
protein low similarity to glycine-rich RNA-binding
protein [Euphorbia esula] GI:2645699; contains
INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA
recognition motif) (RRM) domain
Length = 337
Score = 28.7 bits (61), Expect = 3.9
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 4/128 (3%)
Frame = +2
Query: 38 RAPESGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGS--NVSNLDRLGD-GAI 208
R+P+ G+ + DRYS + + S D +D ++ + + + +R D +
Sbjct: 104 RSPDRRSDGNYERDRYSDRSRERDRS---QDRRKDHRYIEKERAYEHSHDFERRNDHDMV 160
Query: 209 DNNHGLSNDF-GFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVV 385
D N F G D G R +D G G N A Q E S + +GG+ R
Sbjct: 161 DRNGYKERVFDGDEGDWRGDRSY-VDNGRGINGTSAHEGRSQETKREDSTILDGGRGRDH 219
Query: 386 YDSGSNGD 409
+ S S+GD
Sbjct: 220 F-SNSSGD 226
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 28.7 bits (61), Expect = 3.9
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Frame = +3
Query: 348 GVLSATGARGGLST--IAGPTEIGTNSSTMAGP-TEIGSNSLTMAGPTEMGSN-SSMMAG 515
G A+G GG+ + +G IG S GP + S GP G S M G
Sbjct: 145 GGFPASGPPGGVPSGPPSGARPIGFGSPPPMGPGMSMPPPSGMPGGPLSNGPPPSGMHGG 204
Query: 516 PTAIGTKSSMMGAGPATPGLTRPY*GPG 599
+ G S M GP + G P GPG
Sbjct: 205 HLSNGPPPSGMPGGPLSNGPPPPMMGPG 232
>At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule
ubiquitin ligase, contains two RING finger domain;
identical to PRT1 [Arabidopsis thaliana] GI:3319884
Length = 410
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 86 SVKGLRKSDSGCGNDGSRDDHWLGSNGSNV 175
+++ K ND + DD WL + GSNV
Sbjct: 276 NIQSYLKEGPSLSNDNNNDDPWLANPGSNV 305
>At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical to
ethylene-insensitive3 GI:2224933 from [Arabidopsis
thaliana]
Length = 628
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +2
Query: 335 DLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGR 514
++ R+ +N + + +N + D N +N S GN +L++D
Sbjct: 533 NIPNRANNNNSSNNQTFFQGNNNNNNVFKFDTADHNNFEAAHNNNNNSSGNRFQLVFDST 592
Query: 515 S-DSDRYKVVDDGSRSGNAGT 574
D + DD S G GT
Sbjct: 593 PFDMASFDYRDDMSMPGVVGT 613
>At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 428
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 414 TNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 503
TNSS+ TE+ S+T GP+ GSN S
Sbjct: 142 TNSSSGIRETEMEQYSVTTVGPSHCGSNPS 171
>At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 430
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 414 TNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 503
TNSS+ TE+ S+T GP+ GSN S
Sbjct: 142 TNSSSGIRETEMEQYSVTTVGPSHCGSNPS 171
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 412 PISVGPAIVDNPPLAPVADSTPLVQIILNINQASSAPIVPGP 287
P S P +PP PV +S+P V + ++ S+P VP P
Sbjct: 70 PKSPAPVSESSPPPTPVPESSPPVPAPM-VSSPVSSPPVPAP 110
>At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 28.3 bits (60), Expect = 5.1
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Frame = +2
Query: 62 GHVDIDRYSVKG---LRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSN 232
G+ D DR S G R S+ G DG+RDD + G + S +D G + +
Sbjct: 198 GYRDDDRNSRDGDRHSRDSEDRYGRDGNRDDDYRGRSRS----VDNYGSRGRSSERERED 253
Query: 233 DFGFVNDNHGLR-DNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGD 409
D + G R D+ G G + + S ++ AVS+ R VY G+
Sbjct: 254 DGHSSSRGSGARADDNSQDGRGGLQRKFSEQNIGAPPSYEEAVSD--SRSPVYSERDGGE 311
Query: 410 RYELVDDG 433
++ G
Sbjct: 312 TPQVTAPG 319
>At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 28.3 bits (60), Expect = 5.1
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Frame = +2
Query: 62 GHVDIDRYSVKG---LRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSN 232
G+ D DR S G R S+ G DG+RDD + G + S +D G + +
Sbjct: 198 GYRDDDRNSRDGDRHSRDSEDRYGRDGNRDDDYRGRSRS----VDNYGSRGRSSERERED 253
Query: 233 DFGFVNDNHGLR-DNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGD 409
D + G R D+ G G + + S ++ AVS+ R VY G+
Sbjct: 254 DGHSSSRGSGARADDNSQDGRGGLQRKFSEQNIGAPPSYEEAVSD--SRSPVYSERDGGE 311
Query: 410 RYELVDDG 433
++ G
Sbjct: 312 TPQVTAPG 319
>At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 28.3 bits (60), Expect = 5.1
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Frame = +2
Query: 62 GHVDIDRYSVKG---LRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSN 232
G+ D DR S G R S+ G DG+RDD + G + S +D G + +
Sbjct: 198 GYRDDDRNSRDGDRHSRDSEDRYGRDGNRDDDYRGRSRS----VDNYGSRGRSSERERED 253
Query: 233 DFGFVNDNHGLR-DNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGD 409
D + G R D+ G G + + S ++ AVS+ R VY G+
Sbjct: 254 DGHSSSRGSGARADDNSQDGRGGLQRKFSEQNIGAPPSYEEAVSD--SRSPVYSERDGGE 311
Query: 410 RYELVDDG 433
++ G
Sbjct: 312 TPQVTAPG 319
>At2g42320.1 68415.m05238 nucleolar protein gar2-related contains
weak similarity to Swiss-Prot:P41891 protein gar2
[Schizosaccharomyces pombe]
Length = 669
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 59 GGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGS 160
G I R SV GL CGND SR WL +
Sbjct: 236 GKRATIARNSVSGLVLVAKSCGNDVSRLTFWLSN 269
>At2g28670.1 68415.m03485 disease resistance-responsive family
protein / fibroin-related contains similarity to silk
fibroin heavy chain [Bombyx mori] gi|765323|gb|AAB31861;
contains disease resistance response protien domain
Pfam:FP03018
Length = 447
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 384 STIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTE---MGSNSSMMAGPTAIGTKSSMMGA 554
S+ +GP + T SS GS SL G G+ S++ GP A GA
Sbjct: 90 SSGSGPGLLPTASSVPGSLAGGGSGSLPTTGSATGAGAGTGSALGGGPGAGSALGGGAGA 149
Query: 555 GPATPG 572
GPA G
Sbjct: 150 GPALGG 155
>At2g09910.1 68415.m01029 hypothetical protein
Length = 985
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = -3
Query: 514 PAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPLVQI 335
P I +E P+ A N P+S GP+ VD+ +V P D L AD P Q
Sbjct: 317 PPIEEETHPLDGEAATSNP--PVSAGPSGVDQVSHETVNPDSQDRTRLEG-ADVVP-AQE 372
Query: 334 ILNINQASSAPIV 296
I +Q+ S +V
Sbjct: 373 IAECDQSQSVQVV 385
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = -3
Query: 535 FVPIAVGPAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPIS--VGPAIVDNPPLAPV 362
FVP A PA I + P ++ PI+ P + P + P +PV
Sbjct: 99 FVPNAPAPATIPVKDLPVASPPVLQPITPIASPPRFIPGDAPKEPPFSGRVTPAPVSSPV 158
Query: 361 ADSTPLVQIILNINQASSAP 302
+D P+ + L S+ P
Sbjct: 159 SDIPPIPSVALPPPTPSNVP 178
>At4g29230.1 68417.m04181 no apical meristem (NAM) family protein
similar to NAM family proteins GP|12751304|,
GP|6223650|, GP|9758909 - Arabidopsis
thaliana,PIR2:T04621
Length = 498
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 470 GRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTHQALLRAGTHQALSRAGDSNGHHG 646
GRS +GLE + G + S + V DGS S L+ T + D+ HHG
Sbjct: 441 GRS-ASGLEELIMGCTSSTTHHDVKDGSSSMGNQQEAEWLKYSTFWPAPDSSDNQDHHG 498
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 520 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 398
+G IDE+ I PA+ F+P+ V V+E + I G
Sbjct: 427 IGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQG 468
>At5g61100.1 68418.m07666 hypothetical protein
Length = 227
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 460 EFEPISVGPAIVDEFVPISVGPAIVDN---PPLAPVADSTPLVQIILNINQASSAP 302
+ E + V +D+ VP +VDN PP+ S+ +Q++ N N +AP
Sbjct: 98 QVEQVVVKQVRIDQTVPSPRTNQVVDNHQDPPIDQTDPSSTTIQVVDNENLIEAAP 153
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 500 IYDGRSDSDRYKVVDDGSRSGNAGTHQALLRAGTHQALSRAGDSN 634
+ +GR D V+ DG + A AL++A HQ ++ DS+
Sbjct: 238 VCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSS 282
>At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF05285:
SDA1 domain; similar to mystery 45A
(GI:16797816){Drosophila melanogaster}
Length = 804
Score = 27.5 bits (58), Expect = 9.0
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 86 SVKGLRKSDSGCGNDGSRDDHWLG-SNGSNVSNLDRLGD-GAIDNNHGLSNDFGFVNDNH 259
+V+ L++SD+ G+DG +DD + G +V GD G+ D SND +N+
Sbjct: 516 NVELLQESDNESGSDGDQDDDGVELPIGDDVEQELIPGDCGSEDKAEEDSNDGDDMNNTE 575
Query: 260 GLRDNGIDTGSG 295
D+ IDT G
Sbjct: 576 D--DSDIDTSIG 585
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,996,199
Number of Sequences: 28952
Number of extensions: 238072
Number of successful extensions: 1058
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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