Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c12f
(604 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18810.1 68416.m02389 protein kinase family protein contains ... 35 0.036
At2g11005.1 68415.m01177 glycine-rich protein 34 0.063
At3g43530.1 68416.m04621 hypothetical protein contains Pfam prof... 34 0.083
At1g07730.2 68414.m00834 disease resistance-responsive family pr... 34 0.083
At2g27660.1 68415.m03352 DC1 domain-containing protein contains ... 32 0.25
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 32 0.25
At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing ... 31 0.44
At4g30600.1 68417.m04341 signal recognition particle receptor al... 31 0.44
At2g46710.1 68415.m05828 rac GTPase activating protein, putative... 31 0.78
At3g48470.1 68416.m05291 expressed protein 30 1.0
At4g30935.1 68417.m04392 WRKY family transcription factor contai... 30 1.4
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 30 1.4
At3g28790.1 68416.m03593 expressed protein 30 1.4
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 29 1.8
At1g78880.1 68414.m09195 balbiani ring 1-related / BR1-related c... 29 1.8
At4g00340.1 68417.m00045 S-locus glycoprotein family protein / c... 29 2.4
At3g29080.1 68416.m03641 hypothetical protein 29 2.4
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 29 3.1
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 29 3.1
At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical... 29 3.1
At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4)... 29 3.1
At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4)... 29 3.1
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do... 29 3.1
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 28 4.1
At2g28670.1 68415.m03485 disease resistance-responsive family pr... 28 4.1
At2g09910.1 68415.m01029 hypothetical protein 28 4.1
At5g56890.1 68418.m07099 protein kinase family protein contains ... 28 5.5
At4g29230.1 68417.m04181 no apical meristem (NAM) family protein... 28 5.5
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 28 5.5
At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule ubiq... 28 5.5
At5g61100.1 68418.m07666 hypothetical protein 27 7.2
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 27 7.2
At5g64360.3 68418.m08085 DNAJ heat shock N-terminal domain-conta... 27 9.6
At5g64360.2 68418.m08084 DNAJ heat shock N-terminal domain-conta... 27 9.6
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 27 9.6
At4g38550.1 68417.m05458 expressed protein 27 9.6
At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family... 27 9.6
At4g29020.1 68417.m04149 glycine-rich protein supporting cDNA gi... 27 9.6
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ... 27 9.6
At2g25980.1 68415.m03120 jacalin lectin family protein similar t... 27 9.6
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 35.1 bits (77), Expect = 0.036
Identities = 26/102 (25%), Positives = 43/102 (42%)
Frame = -1
Query: 598 SDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDT 419
S S G+ ++ N +N +N + G+ DNN+G + D N+N+G +NG +
Sbjct: 61 SQSPPSPQGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKD----NNNNGNNNNGNNN 116
Query: 418 GSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDR 293
DN G + + N+ + G R N DR
Sbjct: 117 NGNDNNGNNN--NGNNNDNNNQNNGGGSNNRSPPPPSRNSDR 156
>At2g11005.1 68415.m01177 glycine-rich protein
Length = 170
Score = 34.3 bits (75), Expect = 0.063
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = -1
Query: 556 WLGS-NGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVD 380
W GS +G GDG+ + G S D G D+ G D+ GSGD+ G
Sbjct: 9 WFGSGDGGGSGGGGGSGDGSGSGDGGGSGDGGGSRDSDGSGDSS-GGGSGDSGGFGD--- 64
Query: 379 VQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDG 272
+D + S+ S+GG R SG NG+ DDG
Sbjct: 65 -NSDNNSVSSDSSGGGSRDGGGSGDNGN----TDDG 95
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -1
Query: 583 GNDGSRDDHWLGSNG-SNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGD 407
G GS D G G S R DG+ D++ G S D G DN D+ G
Sbjct: 20 GGGGSGDGSGSGDGGGSGDGGGSRDSDGSGDSSGGGSGDSGGFGDNSDNNSVSSDSSGGG 79
Query: 406 NR 401
+R
Sbjct: 80 SR 81
>At3g43530.1 68416.m04621 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 615
Score = 33.9 bits (74), Expect = 0.083
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -1
Query: 421 TGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDR-YELVDDGRPNGDRFEF 245
TG+ D G + D +N+L E S + G R V + + D+ D+ R G++
Sbjct: 411 TGTDDAYGSKEIDDRENELEEGSDANGGDNEREVREKETEIDKEVAQGDNEREVGEKETE 470
Query: 244 VDNGRSDGNGLELIYDGRSDSDRYKVVDDGS 152
+D + G G I+DG D + K V + +
Sbjct: 471 ID--KEVGQGDSDIFDGNKDMELNKEVAEST 499
>At1g07730.2 68414.m00834 disease resistance-responsive family
protein contains Pfam PF03018: Plant disease resistance
response protein
Length = 389
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = -2
Query: 357 GVLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAI 178
G SA+G G L T GP + T S++ P S +L + GP + ++S ++ G ++
Sbjct: 66 GTGSASGGLGSLGTNTGPGPLSTTGSSLL-PV-ASSGTLPVTGPGPLPTSSGLLPGASSG 123
Query: 177 GTKSSMMGAGP 145
S G+GP
Sbjct: 124 NLPGS--GSGP 132
>At2g27660.1 68415.m03352 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 718
Score = 32.3 bits (70), Expect = 0.25
Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 1/143 (0%)
Frame = -1
Query: 571 SRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRA 392
+R + + N N G +NN G + G N + L G GSG N G A
Sbjct: 222 TRPNRTINPNRPIAQNAAVNGPRRQNNNLGYNAQVG-PNGPNELTGQGSMDGSGYN-GSA 279
Query: 391 SLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGRS-DGNG 215
S + + D+ V V + GD Y V++ G+ + D G DGNG
Sbjct: 280 SATNKEFDVDVDVDVDVDVDVDVDVEVEYEGDVY--VEEANDEGEDVDGNDEGEDVDGNG 337
Query: 214 LELIYDGRSDSDRYKVVDDGSRS 146
LE++ + S Y D GS S
Sbjct: 338 LEIVACVDNLSVAYSESDFGSSS 360
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 583 GNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDN 404
GND DD NG++ N + +++ N S + G N++H + +NG G DN
Sbjct: 198 GNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESG--NEDHSMEENGSGVGE-DN 254
>At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing
protein Dof zinc finger protein, Oryza sativa,
EMBL:AB028129
Length = 372
Score = 31.5 bits (68), Expect = 0.44
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = -1
Query: 553 LGSNGSNVS--NLDRLGDGAIDNNH--GLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASL 386
+G N N+ N GD +NH GL++ G N+N+ NGI TG N G L
Sbjct: 217 MGVNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGG--GL 274
Query: 385 VDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPN 263
+D+ +R +SN Y+ + R + D +PN
Sbjct: 275 MDIST--CQRLMLSNYDHHH--YNHQEDHQRVATIMDVKPN 311
>At4g30600.1 68417.m04341 signal recognition particle receptor alpha
subunit family protein similar to Signal recognition
particle receptor alpha subunit (SR-alpha) (Docking
protein alpha) (DP-alpha) (SP:P08240) [Homo sapiens};
similar to Signal recognition particle receptor alpha
subunit (SR-alpha) (Docking protein alpha) (DP-alpha)
(SP:P06625) [Canis familiaris}; contains Pfam PF04086:
Signal recognition particle, alpha subunit, N-terminal;
contains Pfam PF00448: SRP54-type protein, GTPase domain
Length = 634
Score = 31.5 bits (68), Expect = 0.44
Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 7/150 (4%)
Frame = -1
Query: 574 GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGR 395
GS+ D G N + VS L +G + NH + +D ND ++N + D
Sbjct: 163 GSKKDDGDGGNKAKVSTLT---NGHSNGNHQMEDDSQETNDLANGKENTSSNVAVDLSKL 219
Query: 394 ASL--VDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELV-DDGRPNGDRFEFVD----N 236
L V+ R S G K V + + V DD P + +F D N
Sbjct: 220 QKLRSKGVRGRGGVRKTDSIGNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDEN 279
Query: 235 GRSDGNGLELIYDGRSDSDRYKVVDDGSRS 146
G +D + G S D+ +V S S
Sbjct: 280 GNNDHVDIVAADQGESMMDKEEVFSSDSES 309
>At2g46710.1 68415.m05828 rac GTPase activating protein, putative
similar to rac GTPase activating protein 2 [Lotus
japonicus] GI:3695061; contains Pfam profiles PF00620:
RhoGAP domain, PF00786: P21-Rho-binding domain
Length = 455
Score = 30.7 bits (66), Expect = 0.78
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = -1
Query: 289 ELVDDGRPNGDRFEFVDNG---RSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTHQAL 119
E++ +PN + +F+ R + + E ++ + +D V+D S +GN G Q L
Sbjct: 357 EILSPEKPNNNNPKFLRVATLCRLEADNEEEFWNIKKRNDHEGVLDTSSGNGNIGPVQRL 416
Query: 118 LRAGTHQ---ALSRAGDSNGHHGSEGQEEFHSFSSSL 17
+ Q + +A SN G +G+E + S SSL
Sbjct: 417 CKHPLFQLSKSTKKAFVSNRDEGRKGREAWSSRLSSL 453
>At3g48470.1 68416.m05291 expressed protein
Length = 1017
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/102 (25%), Positives = 44/102 (43%)
Frame = -1
Query: 433 NGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDR 254
N ++ G G+N+ ASL +V N+ R+ K + + + D E+VD N D
Sbjct: 524 NTMENGDGENKRSASLTEV-NESSRRNKQKENRKSKNI-SAFVLADPNEIVDLATLNCDT 581
Query: 253 FEFVDNGRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTH 128
D+G D + + + + Y ++DD G TH
Sbjct: 582 ESDKDDGDDDAS-VSSDNSSVTSLEPYDLMDDDKDLGKQFTH 622
>At4g30935.1 68417.m04392 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 466
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 239 VNEFEPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPLVQIILNINQASSAPIV 409
V E + P++ ++V P + +P A A PLV + Q S +P+V
Sbjct: 98 VEENRQVETSPSLAASSDSLTVTPCLSLDPATASTAQDLPLVSVPTKQEQRSDSPVV 154
>At4g15180.1 68417.m02328 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 2326
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 251 EPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPL 361
EP+ VG A +E + V I D PP P+A + L
Sbjct: 591 EPVQVGEAPTEELPSMEVDMDICDTPPHEPMASDSSL 627
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = -2
Query: 363 TRGVLSATGAR---GGLSTIAGP-TEIGTNSSTMAGPTEI--GSNSLTMAGPTEMGSNSS 202
++G S +G+ G + T G TE G+ SS+ A E+ GS+ T T S +S
Sbjct: 215 SQGTSSKSGSESTAGSIETNTGSKTEAGSKSSSSAKTKEVSGGSSGNTYKDTTGSSSGAS 274
Query: 201 MMAGPTAIGTKSSMMGAGPATPGLTRP 121
PT + + P+TP + P
Sbjct: 275 PSGSPTPTPSTPTPSTPTPSTPTPSTP 301
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 242 NEFEPISVGPAIVDEFVP--ISVGPAIVDNPPLAPVADSTPLVQIILNINQASSA 400
N E I+ A ++E V ++GP ++ + A S P +++I NINQ SA
Sbjct: 573 NLMEEIASVEADIEEIVKRRCAIGPPSLEEASSSSPASSVPEMRLIRNINQLESA 627
>At1g78880.1 68414.m09195 balbiani ring 1-related / BR1-related
contains weak similarity to BR1 [Chironomus tentans]
gi|7042|emb|CAA45607
Length = 468
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/91 (26%), Positives = 36/91 (39%)
Frame = -2
Query: 354 VLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIG 175
V +ATG G AG + T +GP L + + G + +GP I
Sbjct: 81 VPNATGRMSGNLASAGSNSM---KKTNSGPLSKHGEPLKKSSGPQSGGVTRQNSGPIPIL 137
Query: 174 TKSSMMGAGPATPGLTRPY*GPGLTRPLVGP 82
+ ++ +GP T G P G R + GP
Sbjct: 138 PTTGLITSGPITSG---PLNSSGAPRKISGP 165
>At4g00340.1 68417.m00045 S-locus glycoprotein family protein /
curculin-like (mannose-binding) lectin family protein /
PAN domain-containing protein contains Pfam profiles:
PF01453 lectin (probable mannose binding), PF00954
S-locus glycoprotein family, PF00024 PAN domain
Length = 402
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 376 QNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGD 257
+ND RS + G RR DSG D +E V D R +GD
Sbjct: 307 RNDAAWRSDDYSDGCRRENGDSGEKSDTFEAVGDLRYDGD 346
>At3g29080.1 68416.m03641 hypothetical protein
Length = 445
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 318 TIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNS 205
T +G TEIG ++ ++ +GS + T PT GS +
Sbjct: 321 TASGQTEIGVSTRCISTSVVVGSEATTNTEPTTTGSRT 358
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 185 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 307
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 406 IGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKG 447
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 28.7 bits (61), Expect = 3.1
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Frame = -2
Query: 357 GVLSATGARGGLST--IAGPTEIGTNSSTMAGP-TEIGSNSLTMAGPTEMGSN-SSMMAG 190
G A+G GG+ + +G IG S GP + S GP G S M G
Sbjct: 145 GGFPASGPPGGVPSGPPSGARPIGFGSPPPMGPGMSMPPPSGMPGGPLSNGPPPSGMHGG 204
Query: 189 PTAIGTKSSMMGAGPATPGLTRPY*GPG 106
+ G S M GP + G P GPG
Sbjct: 205 HLSNGPPPSGMPGGPLSNGPPPPMMGPG 232
>At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical to
ethylene-insensitive3 GI:2224933 from [Arabidopsis
thaliana]
Length = 628
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = -1
Query: 370 DLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGR 191
++ R+ +N + + +N + D N +N S GN +L++D
Sbjct: 533 NIPNRANNNNSSNNQTFFQGNNNNNNVFKFDTADHNNFEAAHNNNNNSSGNRFQLVFDST 592
Query: 190 S-DSDRYKVVDDGSRSGNAGT 131
D + DD S G GT
Sbjct: 593 PFDMASFDYRDDMSMPGVVGT 613
>At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 428
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 291 TNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 202
TNSS+ TE+ S+T GP+ GSN S
Sbjct: 142 TNSSSGIRETEMEQYSVTTVGPSHCGSNPS 171
>At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 430
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 291 TNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 202
TNSS+ TE+ S+T GP+ GSN S
Sbjct: 142 TNSSSGIRETEMEQYSVTTVGPSHCGSNPS 171
>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
domain-containing protein contains Pfam profiles
PF02170: PAZ domain, PF02171: Piwi domain
Length = 1194
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = -1
Query: 604 RKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHG-LSNDFGFVNDNHGLRDNG 428
R D G G D H G G GDG G + D HG R G
Sbjct: 35 RGGDGDRGYSGRGDGHGRGGGGDRGRGYSGRGDGRGRGGGGDRGRGYSGRGDGHG-RGGG 93
Query: 427 IDTGSG-DNRGRASLVD 380
D G G RGR + D
Sbjct: 94 GDRGRGYSGRGRGFVQD 110
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 293 PISVGPAIVDNPPLAPVADSTPLVQIILNINQASSAPIVPGP 418
P S P +PP PV +S+P V + ++ S+P VP P
Sbjct: 70 PKSPAPVSESSPPPTPVPESSPPVPAPM-VSSPVSSPPVPAP 110
>At2g28670.1 68415.m03485 disease resistance-responsive family
protein / fibroin-related contains similarity to silk
fibroin heavy chain [Bombyx mori] gi|765323|gb|AAB31861;
contains disease resistance response protien domain
Pfam:FP03018
Length = 447
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 321 STIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTE---MGSNSSMMAGPTAIGTKSSMMGA 151
S+ +GP + T SS GS SL G G+ S++ GP A GA
Sbjct: 90 SSGSGPGLLPTASSVPGSLAGGGSGSLPTTGSATGAGAGTGSALGGGPGAGSALGGGAGA 149
Query: 150 GPATPG 133
GPA G
Sbjct: 150 GPALGG 155
>At2g09910.1 68415.m01029 hypothetical protein
Length = 985
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +2
Query: 191 PAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPLVQI 370
P I +E P+ A N P+S GP+ VD+ +V P D L AD P Q
Sbjct: 317 PPIEEETHPLDGEAATSNP--PVSAGPSGVDQVSHETVNPDSQDRTRLEG-ADVVP-AQE 372
Query: 371 ILNINQASSAPIV 409
I +Q+ S +V
Sbjct: 373 IAECDQSQSVQVV 385
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +2
Query: 170 FVPIAVGPAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPIS--VGPAIVDNPPLAPV 343
FVP A PA I + P ++ PI+ P + P + P +PV
Sbjct: 99 FVPNAPAPATIPVKDLPVASPPVLQPITPIASPPRFIPGDAPKEPPFSGRVTPAPVSSPV 158
Query: 344 ADSTPLVQIILNINQASSAP 403
+D P+ + L S+ P
Sbjct: 159 SDIPPIPSVALPPPTPSNVP 178
>At4g29230.1 68417.m04181 no apical meristem (NAM) family protein
similar to NAM family proteins GP|12751304|,
GP|6223650|, GP|9758909 - Arabidopsis
thaliana,PIR2:T04621
Length = 498
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -1
Query: 235 GRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTHQALLRAGTHQALSRAGDSNGHHG 59
GRS +GLE + G + S + V DGS S L+ T + D+ HHG
Sbjct: 441 GRS-ASGLEELIMGCTSSTTHHDVKDGSSSMGNQQEAEWLKYSTFWPAPDSSDNQDHHG 498
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 185 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 307
+G IDE+ I PA+ F+P+ V V+E + I G
Sbjct: 427 IGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQG 468
>At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule
ubiquitin ligase, contains two RING finger domain;
identical to PRT1 [Arabidopsis thaliana] GI:3319884
Length = 410
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 601 KSDSGCGNDGSRDDHWLGSNGSNV 530
K ND + DD WL + GSNV
Sbjct: 282 KEGPSLSNDNNNDDPWLANPGSNV 305
>At5g61100.1 68418.m07666 hypothetical protein
Length = 227
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 245 EFEPISVGPAIVDEFVPISVGPAIVDN---PPLAPVADSTPLVQIILNINQASSAP 403
+ E + V +D+ VP +VDN PP+ S+ +Q++ N N +AP
Sbjct: 98 QVEQVVVKQVRIDQTVPSPRTNQVVDNHQDPPIDQTDPSSTTIQVVDNENLIEAAP 153
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 205 IYDGRSDSDRYKVVDDGSRSGNAGTHQALLRAGTHQALSRAGDSN 71
+ +GR D V+ DG + A AL++A HQ ++ DS+
Sbjct: 238 VCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSS 282
>At5g64360.3 68418.m08085 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 187 DSDRYKVVDDGSRSGNAGTHQALLRAGTHQALSRAGD----SNGHHGSEGQEEFHSFSSS 20
D D Y + DG +G+ G Q +++ + + + SN HG E + S SS+
Sbjct: 298 DDDIYVAISDGDDAGDDGDWQDVVQVNKKTNVGKGKETYVRSNKKHGVEEVQNVESISSA 357
>At5g64360.2 68418.m08084 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 187 DSDRYKVVDDGSRSGNAGTHQALLRAGTHQALSRAGD----SNGHHGSEGQEEFHSFSSS 20
D D Y + DG +G+ G Q +++ + + + SN HG E + S SS+
Sbjct: 298 DDDIYVAISDGDDAGDDGDWQDVVQVNKKTNVGKGKETYVRSNKKHGVEEVQNVESISSA 357
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Frame = -1
Query: 289 ELVDDGRPNGD--RFEFVDNGR----SDGNGLELIYDGRSDSDRYKVVDDGSRSGN---A 137
EL+ + NG F ++G+ S G+G ++D R+ YK VD+GS G +
Sbjct: 366 ELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCS 425
Query: 136 GTHQALLRAGTHQAL 92
+ AL +GT + +
Sbjct: 426 SLNGALFASGTDRGI 440
>At4g38550.1 68417.m05458 expressed protein
Length = 612
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -1
Query: 199 DGRSDSDRYKVVDDGSRSGNAGTHQALLRAGTHQALSRAGDSNGHHGSEGQEEFH 35
D RS+ D+ + D + G+ + + H A + D +HG E E+F+
Sbjct: 211 DRRSNYDKEQFEDLYEQDGDVTPRNSSPPSPFHPAAYKTSDQRSNHGKEQIEDFY 265
>At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family
protein
Length = 513
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 255 GSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPA-TPGLTRPY*G---PGLTRP 94
G +S A P+ SS+ GP+ T++ + G+ PA T G T+ G P LT P
Sbjct: 427 GPSSSLFATPSSTAPTSSLF-GPSPTPTQTPLFGSSPASTFGSTQSLFGQTTPSLTMP 483
>At4g29020.1 68417.m04149 glycine-rich protein supporting cDNA
gi|20465684|gb|AY096677.1|
Length = 158
Score = 27.1 bits (57), Expect = 9.6
Identities = 21/90 (23%), Positives = 34/90 (37%)
Frame = -2
Query: 417 GPGTIGAELAWLMFKMICTRGVLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLT 238
G G +GA L + + GVL G GG+ + G + G + +G
Sbjct: 54 GAGGVGAGLGGVAGGVGGVAGVLPVGGVGGGIGGLGGGVGGLGGLGGLGGGSGLGHGVGG 113
Query: 237 MAGPTEMGSNSSMMAGPTAIGTKSSMMGAG 148
+ G +GS + G +G + G G
Sbjct: 114 IGGDPGIGSGIGGLGGAGGLGGIGGVGGLG 143
>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 364
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 205 IYDGRSDSDRYKVVDDGSRSGNAGTHQALLRAGTHQALSRAGDSN 71
+ DGR + V+ DG + A AL++A HQ ++ DS+
Sbjct: 231 VCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSS 275
>At2g25980.1 68415.m03120 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 449
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 310 GSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYD 197
GS GD E DDG +G R +V G + ++ +YD
Sbjct: 308 GSGGDGGESWDDGAFDGVRKIYVGQGENGIASVKFVYD 345
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,697,746
Number of Sequences: 28952
Number of extensions: 213525
Number of successful extensions: 999
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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