Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c11f
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   1.8  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.4  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   3.2  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.3  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    24   4.3  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.4  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    23   7.4  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    23   9.8  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 202 AAAMHHEYYTPHY 164
           AAAMHH ++ PH+
Sbjct: 153 AAAMHHHHHHPHH 165


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = +1

Query: 211 RPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPI 357
           RP YW+ P  +   D+   KE         +++L+ +    +++L   I
Sbjct: 299 RPAYWWTPAIQAMIDNLSRKEQMTMRTIPPEEQLQTELLAARESLRKAI 347


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -3

Query: 426 LSCNKSHSFC-LRSPCY 379
           ++CN SHSFC LR   Y
Sbjct: 622 VNCNDSHSFCGLRDQLY 638


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
 Frame = +1

Query: 226 YVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSP---ILNDVKKNVTWTPQ 396
           YVP E +W  D +   N    E V+    +A      K + +P     +  + +V + P 
Sbjct: 111 YVPSEHIWLPDIVLYNNADG-EYVVTTLTKAILHYTGKVIWTPPAIFKSSCEIDVRYFPF 169

Query: 397 TKRVGLIARKIGNYPLWCKDGKKVS---TTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVE 567
            ++   +  K G+   W  DG ++       L   DN V   I   EY P ++ ++  V 
Sbjct: 170 DQQTCFM--KFGS---WTYDGNQIDLKHKNQLNNSDNMVKIGIDLREYYPSVEWDILGVP 224

Query: 568 XQKY 579
            +++
Sbjct: 225 AERH 228


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -3

Query: 426 LSCNKSHSFC-LRSPCY 379
           ++CN SHSFC +R   Y
Sbjct: 623 INCNDSHSFCGIRDQLY 639


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +1

Query: 475 TLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEXQKYGC 585
           T + V +N    Y+PP  +K   K ++ W       C
Sbjct: 126 TNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 162


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +1

Query: 475 TLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEXQKYGC 585
           T + V +N    Y+PP  +K   K ++ W       C
Sbjct: 126 TNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 162


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 480 QSRGYLFTIFTP*WIVSYLSCNKSHSFCLRSPCYIFF 370
           +S GY F  FTP  I S L   K +   L +P  I F
Sbjct: 640 RSMGYPFDRFTPGTIGSLLDFTKPYVNMLVTPVKIRF 676


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
 Frame = -3

Query: 423 SCNKSHSFC-LRSPCY 379
           +CN SHS+C LR   Y
Sbjct: 622 NCNDSHSYCGLRDQLY 637


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,563
Number of Sequences: 2352
Number of extensions: 11690
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)