Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c10r
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro...    29   4.5  
AF145617-1|AAD38592.1|  594|Drosophila melanogaster BcDNA.GH0352...    29   4.5  
AE014296-337|AAF47553.2|  881|Drosophila melanogaster CG2086-PB,...    29   4.5  
AE014296-336|AAF47552.1|  594|Drosophila melanogaster CG2086-PA,...    29   4.5  

>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p
           protein.
          Length = 1031

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = -3

Query: 532 GLFFTGSRTSCESARVGTNHHTAYFCRFRFEWRGSRCNYTEIL*LISQGGWRHLRC 365
           GL+  G +  C     G  +H    C+    W GS CN +       QG  +  RC
Sbjct: 658 GLYGPGCKLKCNCEHGGECNHVTGQCQCLPGWTGSNCNESCPTDTYGQGCAQRCRC 713


>AF145617-1|AAD38592.1|  594|Drosophila melanogaster BcDNA.GH03529
           protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = -3

Query: 532 GLFFTGSRTSCESARVGTNHHTAYFCRFRFEWRGSRCNYTEIL*LISQGGWRHLRC 365
           GL+  G +  C     G  +H    C+    W GS CN +       QG  +  RC
Sbjct: 210 GLYGPGCKLKCNCEHGGECNHVTGQCQCLPGWTGSNCNESCPTHTYGQGCAQRCRC 265


>AE014296-337|AAF47553.2|  881|Drosophila melanogaster CG2086-PB,
           isoform B protein.
          Length = 881

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = -3

Query: 532 GLFFTGSRTSCESARVGTNHHTAYFCRFRFEWRGSRCNYTEIL*LISQGGWRHLRC 365
           GL+  G +  C     G  +H    C+    W GS CN +       QG  +  RC
Sbjct: 497 GLYGPGCKLKCNCEHGGECNHVTGQCQCLPGWTGSNCNESCPTDTYGQGCAQRCRC 552


>AE014296-336|AAF47552.1|  594|Drosophila melanogaster CG2086-PA,
           isoform A protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = -3

Query: 532 GLFFTGSRTSCESARVGTNHHTAYFCRFRFEWRGSRCNYTEIL*LISQGGWRHLRC 365
           GL+  G +  C     G  +H    C+    W GS CN +       QG  +  RC
Sbjct: 210 GLYGPGCKLKCNCEHGGECNHVTGQCQCLPGWTGSNCNESCPTDTYGQGCAQRCRC 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,951,667
Number of Sequences: 53049
Number of extensions: 574536
Number of successful extensions: 872
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)