Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c10r
         (684 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48638-8|CAA88568.1|  237|Caenorhabditis elegans Hypothetical pr...    31   0.77 
AF025465-4|AAB71029.1|  297|Caenorhabditis elegans Hypothetical ...    28   5.4  

>Z48638-8|CAA88568.1|  237|Caenorhabditis elegans Hypothetical
           protein ZK892.6 protein.
          Length = 237

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -1

Query: 219 CVRFFISMRYTL*LLATESIGPHTSLQHTSL*L*AQLYNNIEVYILRMKLCDFYL 55
           C+ F      T  LLAT+ +GP + ++ TS  L    +N++ V + +  + +F L
Sbjct: 112 CLFFVDGKDVTFCLLATDKVGPWSDIEETSAPLRFDYHNHLRVCVRKDTIQEFQL 166


>AF025465-4|AAB71029.1|  297|Caenorhabditis elegans Hypothetical
           protein K02E7.9 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 465 PISAGFGLNGGAAVVTILKYYNSY 394
           PI + F   GG  ++T+ KY N+Y
Sbjct: 77  PIDSNFDKRGGICIMTVPKYINAY 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,428
Number of Sequences: 27780
Number of extensions: 293276
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)