Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c10r
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 238 LDLILSPSELYRQIVGPFFYCLDGWP 315
           L  +L+PS +YR + G     + G P
Sbjct: 466 LGSLLNPSHMYRAVCGRIENTIQGLP 491


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 108 YNNIEVYILRMKLCDFYL 55
           YNNI+ Y+L      +YL
Sbjct: 192 YNNIDYYLLAANYTGWYL 209


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 108 YNNIEVYILRMKLCDFYL 55
           YNNI+ Y+L      +YL
Sbjct: 192 YNNIDYYLLAANYTGWYL 209


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 178 KLQSVTHTNEKPHAFEV 228
           K+ + THT EKP+  ++
Sbjct: 220 KVHTRTHTGEKPYTCDI 236


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 283 LLSGGIARSDLVLNQEYFKPQMREVFH 203
           ++SGG+A     L    ++  M  VFH
Sbjct: 1   MVSGGMAGQHYCLRWNNYQSNMTSVFH 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,874
Number of Sequences: 438
Number of extensions: 3539
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)