Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c10f
(618 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 102 3e-22
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 83 1e-16
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 43 2e-04
SB_8629| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 39 0.004
SB_8625| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) 36 0.035
SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0) 35 0.046
SB_58579| Best HMM Match : DMP1 (HMM E-Value=2.3) 34 0.080
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 34 0.080
SB_10204| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.46
SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 31 0.75
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 31 0.99
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 30 1.3
SB_44038| Best HMM Match : DUF1168 (HMM E-Value=1.5) 30 1.7
SB_48655| Best HMM Match : BAG (HMM E-Value=6.2) 30 1.7
SB_38025| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_21869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 29 3.0
SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32) 29 3.0
SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2) 29 4.0
SB_31610| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022) 29 4.0
SB_6380| Best HMM Match : MFS_1 (HMM E-Value=0.88) 29 4.0
SB_37206| Best HMM Match : MFS_1 (HMM E-Value=3.4e-17) 29 4.0
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_20213| Best HMM Match : MFS_1 (HMM E-Value=0.023) 28 5.3
SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047) 28 5.3
SB_43296| Best HMM Match : DUF957 (HMM E-Value=4.3) 28 5.3
SB_40170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_18164| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 28 7.0
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 7.0
SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12) 28 7.0
SB_28351| Best HMM Match : Exo_endo_phos (HMM E-Value=0.041) 28 7.0
SB_16411| Best HMM Match : DUF791 (HMM E-Value=0) 28 7.0
SB_52191| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 27 9.2
SB_44917| Best HMM Match : DUF156 (HMM E-Value=3) 27 9.2
SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_7305| Best HMM Match : Extensin_2 (HMM E-Value=0.043) 27 9.2
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 27 9.2
SB_53370| Best HMM Match : GnRH (HMM E-Value=7.1) 27 9.2
SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_28786| Best HMM Match : PKD_channel (HMM E-Value=0) 27 9.2
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_6115| Best HMM Match : efhand (HMM E-Value=0.22) 27 9.2
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 102 bits (244), Expect = 3e-22
Identities = 52/135 (38%), Positives = 83/135 (61%)
Frame = +3
Query: 45 WRQYIIAGVANIATIALGFALGWTSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLSVGAM 224
W ++ +A + ++ G+ +G++S +L + N T L + DEI+W GSLL++GAM
Sbjct: 38 WAVWMATFIAALGPLSFGYCMGYSSAATTQLENKNATDLY--LNADEITWFGSLLNIGAM 95
Query: 225 FGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVL 404
G I GFL IGR+++++L+SVP G++L+ +N AM+ AGR GL VGM +
Sbjct: 96 LGGPIQGFLIDLIGRKFALILTSVPFCSGWLLIGFGKNAAMLNAGRFMSGLGVGMASLNV 155
Query: 405 PMYCAEIATDDTRGA 449
P+Y +E A+ RGA
Sbjct: 156 PVYISETASFSNRGA 170
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 83.4 bits (197), Expect = 1e-16
Identities = 44/133 (33%), Positives = 76/133 (57%)
Frame = +3
Query: 48 RQYIIAGVANIATIALGFALGWTSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLSVGAMF 227
R + +A + ++ GF LG++S L+ ++ S +T + SW SL+++GA+
Sbjct: 43 RMVLATFIAALGPLSFGFCLGYSSSALEDLIA--ESKESVKLTVSQGSWFSSLVTLGAIL 100
Query: 228 GPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVLP 407
G +GG+ GR+ +I+ +VP VG++L+ + M+Y GR GLAVGM+ +P
Sbjct: 101 GAPLGGWTLEYFGRKGTIMACAVPFEVGWMLIAYANSHYMLYIGRFITGLAVGMVSLTVP 160
Query: 408 MYCAEIATDDTRG 446
+Y AEI++ RG
Sbjct: 161 VYIAEISSPSLRG 173
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +3
Query: 219 AMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYT 398
A+ G +GG L +GR+ ++L S G V++ ++ GR+ GL +G
Sbjct: 100 AIVGAVLGGILNDSLGRKPVLVLCSGVFTAGAVVMGVAGTKHVLLVGRLVIGLGIGGASM 159
Query: 399 VLPMYCAEIATDDTRG 446
+P+Y AE A RG
Sbjct: 160 TVPIYVAEAAPSSMRG 175
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 192 WIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFW 371
W+ + ++ G +G FL +IGRR +L S +I+ L+ +AM + +V
Sbjct: 332 WLAAAIAFGNTLFTIVGIFLVERIGRRKLLLGSLAGVILSLFLLGGAFYLAMQHNPKVST 391
Query: 372 GLAVGMLYT 398
+ ++T
Sbjct: 392 AETINPVFT 400
>SB_8629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 174 TNDEISWIGSL-LSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMI 350
T++ S+ G++ L+ MFGPF GG L + G R + SS+ I+G V V N+ ++
Sbjct: 81 THNSPSFPGAIALAFSGMFGPF-GGHLTDRFGCRVVFMSSSLITIIGLVSSSFVSNIVLL 139
Query: 351 YAGRVFW-GLAVGMLY 395
Y F G+ ++Y
Sbjct: 140 YFTYGFMNGIGSNLIY 155
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 222 MFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVA---VQNVAMIYAGRVFWGLAVGML 392
M G G A++ GR+ S+L ++ IVG +L+ + ++ GR G+ GM
Sbjct: 1 MIGALAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGRFVIGINCGMN 60
Query: 393 YTVLPMYCAEIATDDTRGA 449
+ P+Y +E+A RG+
Sbjct: 61 TAIAPIYLSELAPIHLRGS 79
>SB_8625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 168 PVTNDEISWIGSL-LSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVA 344
PV + ++ G++ L+ MFGPF GG L + G R + SS+ I+G V V N+
Sbjct: 260 PVYQADAAFPGAIALAFSGMFGPF-GGHLTDRYGCRVVFMSSSLITIIGLVSSSFVPNIV 318
Query: 345 MIY 353
++Y
Sbjct: 319 LLY 321
>SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)
Length = 520
Score = 35.5 bits (78), Expect = 0.035
Identities = 16/79 (20%), Positives = 46/79 (58%)
Frame = -2
Query: 602 HRGFRHEEEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGD 423
H+ + E+E +D ++ D L +++ + R+ ++ ++E + ++++KE++ +A+
Sbjct: 189 HQLAKEEQEDRCDDEEFQEIDSLNQQLTERRARALEKKENELFKEIKEQAHLSAKEA-DR 247
Query: 422 LGAVHRQNRIQHTDCQTPE 366
L + H+++ Q+ D + E
Sbjct: 248 LMSKHKEDLDQYADKKARE 266
>SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0)
Length = 839
Score = 35.1 bits (77), Expect = 0.046
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +3
Query: 45 WRQYIIAGVANIATIA-LGFALGWTSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLSVGA 221
W +++ A+I+TI LGF+ + + + L ND+ +I+W+GS+
Sbjct: 406 WWSFLVCVSASISTIIILGFSHCFAVVMPVLLNYFNDS-------RQKIAWVGSITQCLT 458
Query: 222 MFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQ-NVAMIYAGRVFWGLAVGMLY 395
F + G L K+ R + +L S+ + VL + ++ + ++ V +GL + Y
Sbjct: 459 FFASPLAGLLIGKLSFRVTAVLGSLTCCISLVLTSFTKASLHIFFSYSVLYGLGSCLFY 517
>SB_58579| Best HMM Match : DMP1 (HMM E-Value=2.3)
Length = 682
Score = 34.3 bits (75), Expect = 0.080
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -2
Query: 608 IIHRGFRHEEEQHAEDRDYSYP--DILQREIGDERSHSVHQQEAKHYEQLKE--RSQGTA 441
+I+ + + + +ED S ++ ++++GD SH V +H EQ K+ R +
Sbjct: 467 VIYHVLENPQRKGSEDFAVSLDSTEVTRKDLGDSESHDVIYHVLEHQEQEKDSTRCLHST 526
Query: 440 RVVRGDLG 417
V++GDLG
Sbjct: 527 EVIKGDLG 534
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 34.3 bits (75), Expect = 0.080
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = -2
Query: 584 EEEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTA---RVVRGDLGA 414
+++Q +D + PD Q + E+ + ++E + EQ K + T + + D +
Sbjct: 891 DKDQEKQDHEQEKPDKDQEKQDREQEKTDKEREQPYQEQDKPDQENTEPGPKQIGPDESS 950
Query: 413 VHRQNRIQHTDCQTPEHSAGVNHCN 339
++R+ + DCQ A N+C+
Sbjct: 951 LNRERDTKRADCQQKNTPANPNYCD 975
>SB_10204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 29.1 bits (62), Expect(2) = 0.46
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 23 QHGAGPIVETVHHSRRGEHRHHC 91
++G G +VE + S+R EH+H+C
Sbjct: 6 EYGFGFLVERIKSSKRYEHQHYC 28
Score = 21.4 bits (43), Expect(2) = 0.46
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = +2
Query: 173 HQRRNIMDRIPSLRRSYVRTIHRRFPGFKNRSSMEYSSVICSTHS 307
HQ + S R +Y RTI + + +++ YS+ +S
Sbjct: 24 HQHYCQKQYLVSSRATYKRTITKATENYSTKATESYSTKAIENYS 68
>SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 340
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -1
Query: 513 TVPLRTPAGSQALRTAEGTIPGHRACRPWRSRRSTSAKPYTAYRLPDPRTLCRRKSL 343
T P ++ ++ + + T P ++ +P +S + T +KP LPD R CR S+
Sbjct: 180 TKPTKSTKPTKPTKPTKSTKPT-KSTKPTKSTKPTESKPTAPTSLPDQRPNCRLPSM 235
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 30.7 bits (66), Expect = 0.99
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -2
Query: 593 FRHEEEQHAEDRDYSYPDILQREI-GDE--RSHSVHQQEAKHYEQLKE 459
F EE + E+ D S D + E G+E +SH HQQ K E+ KE
Sbjct: 465 FASEESERKENDDQSEADFEKNEEEGEENTKSHEEHQQRTKEREKPKE 512
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 186 ISWI-GSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYA-G 359
+SW S++ G +FG + G L+ K GRR + +SS ++ + +YA
Sbjct: 92 LSWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFISSC-MVCWVAFASSFVPYYWLYAVF 150
Query: 360 RVFWGLAVGMLYTVLPMYCAEIATDDTR 443
R F G +G +L + E R
Sbjct: 151 RFFIGFGLGGSIVILFIMATEFVGPQKR 178
>SB_44038| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 149
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 438 CRPWRSRRSTSAKPYTAYRL--PDPRTLCRRKSLQHFERPP 322
C +++R+ + Y A RL P PR + + LQH E+PP
Sbjct: 9 CIQAQTKRTPHTRQYLAARLAYPQPRGNRQAQQLQHVEKPP 49
>SB_48655| Best HMM Match : BAG (HMM E-Value=6.2)
Length = 190
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -2
Query: 557 DYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGDLG 417
DYS I+ E+G +HS A ++ E GTAR+VRGD+G
Sbjct: 115 DYSRR-IMWLEVGRTNNHS--GVVASYFLDCVESVGGTARIVRGDMG 158
>SB_38025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 204 LLSVGAMFGPFIGGFLASKIGRR-WSILLSSVPLIVGFVLVVAVQNV 341
++++ + G + GF+ ++GR + LSS +++G L+ VQN+
Sbjct: 446 VIAIPLILGTPVSGFIFDRLGRYDVAFYLSSAAVVIGICLMFVVQNL 492
>SB_21869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1123
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 583 KKNSTQKTATTAIPTYCSVK*GTNGPTPYTSRKPSTTN 470
K+ +TQK TT PTY ++ N T TS +P+TT+
Sbjct: 622 KRPATQKALTTLPPTYTTL----NPATDQTSAQPTTTH 655
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 500 VHQQEAKHYEQLKERSQGTARVVRGDLGAVHRQNRIQHTDCQT 372
+ +Q+ ++YE K +G V+RG+ + RQ R H +T
Sbjct: 331 ITRQQRRYYEATKTLLRGNKDVLRGNKDVITRQQRRYHEATKT 373
>SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32)
Length = 429
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 275 PSTTDF*SQETSDEWSEHSSDGEKGSDP 192
P+ DF + T + ++E+S +G+K SDP
Sbjct: 132 PTNEDFTADATGNSFTENSENGQKTSDP 159
>SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)
Length = 318
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 256 EARKPPMNGPNIAPTERRDPIHDISSLVTGR 164
++R P+ GP +PTER PI D + TG+
Sbjct: 47 DSRHRPVGGPAYSPTERAYPITDRAYSPTGQ 77
>SB_31610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 584 EEEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGDL 420
EEE+ E+ + + + E G+E ++E + E+ +E R VRG L
Sbjct: 36 EEEEEEEEEEEEEEEEEEEEEGEEEEEEEEEEEEEEEEEEEEEEATFRRHVRGAL 90
>SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022)
Length = 453
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 195 IGSLLSVGAMFGPFIGGFLASKIGRRWSILL-SSVPLIVGF 314
+ S G + G +GG+ + + GRR +L+ S++ LI+ F
Sbjct: 118 VQSCFFAGMLVGSMVGGWASDRFGRRLCLLVGSAIMLILSF 158
>SB_6380| Best HMM Match : MFS_1 (HMM E-Value=0.88)
Length = 715
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 479 AWLPAGVRSGTVRPLFHAAVCRDSCSRGLLRAVL 580
+WL A V P+FH C+D+ + L VL
Sbjct: 163 SWLAANYSISLVSPVFHVGFCKDNATVTLAEDVL 196
>SB_37206| Best HMM Match : MFS_1 (HMM E-Value=3.4e-17)
Length = 1088
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/80 (21%), Positives = 38/80 (47%)
Frame = +3
Query: 162 SRPVTNDEISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNV 341
SRPV + + WI ++ A+FG I G +A + +++ + + ++
Sbjct: 633 SRPVNS--MGWIFFSQALSALFGSSISGIMADRYDCNIILVVCVACVAISLTVIPLCSQF 690
Query: 342 AMIYAGRVFWGLAVGMLYTV 401
++ + F G+ +G++ TV
Sbjct: 691 QLMLSVFAFLGVNMGIIDTV 710
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -2
Query: 542 DILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGDLGAVHRQNR 396
++++R++ DE VH+QE + E S+ + + +GA+ R+NR
Sbjct: 2200 EMVERDVYDELVAKVHEQELSFQARESEFSERVSS-LEEQIGALERENR 2247
>SB_20213| Best HMM Match : MFS_1 (HMM E-Value=0.023)
Length = 247
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 189 SWIGSLL-SVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIY-AGR 362
+W+GSL ++ F P F+ + G R L+ + +G + + + ++Y
Sbjct: 76 AWVGSLAIALSMTFSPIAAKFI-ERFGPRLVSLIGGIVAALGLFITSQISTIDIMYLTYS 134
Query: 363 VFWGLAVGMLYT 398
V +G LYT
Sbjct: 135 VVFGFGSSCLYT 146
>SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047)
Length = 632
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/89 (24%), Positives = 37/89 (41%)
Frame = -2
Query: 590 RHEEEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGDLGAV 411
RH +++ E R Y PD E ++ HS E K + L +RSQ R +
Sbjct: 296 RHRIKRNRERRRYQ-PDTQTCEYPQDK-HSSILDENKQMQDLDKRSQNNRRTGHRSRCEL 353
Query: 410 HRQNRIQHTDCQTPEHSAGVNHCNILNGH 324
H + ++T + +A N+ N +
Sbjct: 354 HGRTTSKNTSKRPTGSAANENNAETQNAY 382
>SB_43296| Best HMM Match : DUF957 (HMM E-Value=4.3)
Length = 447
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 233 IHRRFPGFKNRSSMEYSSVICSTHSRFCFGGGRSKCCN 346
+H+ PGF SS +CST C G C N
Sbjct: 108 LHQALPGFPLYSSKALDGFVCSTDEEKCMTGLCRDCPN 145
>SB_40170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 28.3 bits (60), Expect = 5.3
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Frame = -2
Query: 599 RGFRHE--EEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQG-TARVVR 429
RG R + E + A D D + QR GD R H H+QE + E ++ G R R
Sbjct: 136 RGDRRDRNELERARDSDRDW----QR--GDGRPHREHRQEGREQESKRDSQNGDDGRPHR 189
Query: 428 GD--LGAVHRQNRIQHTDCQTPEHSAGVNHCNILNGHHQNKTDYEWNR*QKNTPSTTDF* 255
+ +G HR + D + S + N+ ++ +R + + ST
Sbjct: 190 EERQVGRDHRHESDRRRDLTSSRLSGDRSRRNMFMRPDDSRPSSSSSRFMRPSSST---- 245
Query: 254 SQETSDEWSEHSSD 213
++ +S WS S +
Sbjct: 246 AEPSSSSWSSFSEN 259
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 190 HGSDPFSPSELCSDHSSEVSWLQKSVVDG 276
H S+P S EL HS+ +W +S V G
Sbjct: 1561 HHSEPDSRPELSHKHSARTTWSSRSPVTG 1589
>SB_18164| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 854
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 438 CRPWRSRRSTSAKPYTAYRLPDPRTLCRR 352
CRPW+ +R + + P PRT RR
Sbjct: 735 CRPWQQKRRKTRPQRLRTKKPSPRTQQRR 763
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 27.9 bits (59), Expect = 7.0
Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 1/140 (0%)
Frame = -2
Query: 614 VQIIHRGFRHEEEQHAE-DRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTAR 438
V ++H E + E D+ Y D + V + E + Y++ ++ ++ +
Sbjct: 849 VLVLHESVNAEVHKIVEHDKSEIYMDTAMEAEEEPMGERVMESEERRYKKGQDEAEDELK 908
Query: 437 VVRGDLGAVHRQNRIQHTDCQTPEHSAGVNHCNILNGHHQNKTDYEWNR*QKNTPSTTDF 258
RG + + + + E V N H + E+N Q++ S
Sbjct: 909 EERGLVSKEEESKVHEESPTEAEEEEEEVAEDN----HSTDDECGEYNVLQESEESPDKL 964
Query: 257 *SQETSDEWSEHSSDGEKGS 198
E S+E SDGE+GS
Sbjct: 965 ---EESEEERSSGSDGERGS 981
>SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12)
Length = 642
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 207 EGIRSMIFRRW*RVATRVCR*DLRASSSPAKSIPKQNPEQWW 82
E ++ FR +VCR R S K + +NP++WW
Sbjct: 68 ESVQFKFFRNMVNRERKVCR--SRFYDSKVKQLKGENPKKWW 107
>SB_28351| Best HMM Match : Exo_endo_phos (HMM E-Value=0.041)
Length = 607
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 207 EGIRSMIFRRW*RVATRVCR*DLRASSSPAKSIPKQNPEQWW 82
E ++ FR +VCR R S K + +NP++WW
Sbjct: 413 ESVQFKFFRNMVNRERKVCR--SRFYDSKVKQLKGENPKKWW 452
>SB_16411| Best HMM Match : DUF791 (HMM E-Value=0)
Length = 445
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 243 GFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYT 398
G+LA+ GR+ + +L ++ V L +N ++ GRV G++ +L+T
Sbjct: 93 GYLANAFGRKKACVLFTILYSV-CCLTKLSRNYGILIFGRVLGGISTSLLFT 143
>SB_52191| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 529
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 413 VHRQNRIQHTDCQTPEHSAGVNHC 342
V RQ+ I+ DCQTP H + HC
Sbjct: 224 VSRQSSIRVRDCQTPSHIPSM-HC 246
>SB_44917| Best HMM Match : DUF156 (HMM E-Value=3)
Length = 1198
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 515 ERSHSVHQQEAKHYEQLKE 459
ER H++E KH E+LKE
Sbjct: 292 ERDEHAHEEEGKHAEELKE 310
>SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 599 RGFRHEEEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHY 474
RGF EE H E + PD E+ S + HQ++AK++
Sbjct: 780 RGFCEEEVGHQEKNKENMPDDYNAEV-SVPSMTPHQKKAKYH 820
>SB_7305| Best HMM Match : Extensin_2 (HMM E-Value=0.043)
Length = 908
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 547 IPTYCSVK*GTNGPT--PYTSRKPSTTNS*RNDPRAPRVSSVAISAQYIGKTVYSIPTAR 374
IP Y S+ PT PY+ ++ + +DPR P +S+ + +Y+ YS P+
Sbjct: 712 IPHYTSLFRTLKHPTTFPYSGPSKTSLHFAISDPRTPYYTSLFHTLKYLTTLRYSGPSNT 771
Query: 373 P 371
P
Sbjct: 772 P 772
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 547 IPTYCSVK*GTNGPT--PYTSRKPSTTNS*RNDPRAPRVSSVAISAQYIGKTVYSIPTAR 374
IP Y S+ PT PY+ ++ + +DPR P +S+ + +Y+ YS P+
Sbjct: 661 IPHYTSLFRTLKHPTTFPYSGPSKTSLHFAISDPRTPYYTSLFHTLKYLTTLRYSGPSNT 720
Query: 373 P 371
P
Sbjct: 721 P 721
>SB_53370| Best HMM Match : GnRH (HMM E-Value=7.1)
Length = 244
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/98 (19%), Positives = 35/98 (35%)
Frame = -2
Query: 593 FRHEEEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGDLGA 414
F+ ++ QH + Q+ + E H H+Q+ YE+ + + V +
Sbjct: 32 FKTQKTQHHVTYKEEHGTHRQQHVTYEEEHGTHRQQHVSYEE-EHGTHRQQHVTYEEEHG 90
Query: 413 VHRQNRIQHTDCQTPEHSAGVNHCNILNGHHQNKTDYE 300
HRQ + + + V + H Q YE
Sbjct: 91 THRQQHVTYEEEHGTHRQHHVTYEEEHGTHRQQHVTYE 128
>SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1669
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 60 IAGVANIATIALGFALGWTSPVNLKLLDPNDTPLSRPVTNDEISWIGSLL 209
IA +A + GF L P ++ LDPN +S T D + ++ +L
Sbjct: 1278 IALTCQVAKVMEGFTLNRILPPIMRKLDPNQFAVSGKSTTDALVYLLHIL 1327
>SB_28786| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1846
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 268 RPIFEARKPPMNGPNIAPTERRDPIHDISSLVTGRDKGVS 149
R +F++ +GPN +PT R+P+ +I L+ G+ S
Sbjct: 733 RYVFKSTDSVFSGPNRSPTCYRNPVGNIDCLI-GKQSNTS 771
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 293 R*QKNTPSTTDF*SQETSDEWSEHSSDGEKGS 198
R Q NT + DF S T + HS+DGE S
Sbjct: 68 RRQLNTQKSKDFTSGNTESIGASHSADGENDS 99
>SB_6115| Best HMM Match : efhand (HMM E-Value=0.22)
Length = 822
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Frame = -2
Query: 584 EEEQHAEDRDYSYPDILQ-----REIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGDL 420
+E Q + D + PD++Q +++ ++ QQEA YE K Q + V+ +
Sbjct: 133 DESQGSVDTAHGPPDVVQSAQEGQDLTVGETNQDAQQEAPVYENAKAEEQAESETVQQEA 192
Query: 419 GAVHRQNRIQHTDCQTPEHSAGVNHCNILNGHHQNKTD---YEWNR*QKNTPST 267
+ + P+ A V+ L + D E+N + T +T
Sbjct: 193 TKTEEEVTKPEEEANKPDEEASVSDEQPLTNEERKLLDSIPEEFNSERSETETT 246
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,440,068
Number of Sequences: 59808
Number of extensions: 543581
Number of successful extensions: 2080
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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