Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c10f
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 57 9e-09
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 53 1e-07
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 52 2e-07
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 52 2e-07
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 48 7e-06
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 47 9e-06
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 35 0.040
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 35 0.054
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 34 0.093
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 34 0.093
U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified vi... 34 0.093
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 34 0.093
AF016679-5|AAB66157.1| 485|Caenorhabditis elegans Hypothetical ... 33 0.22
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 32 0.29
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 31 0.50
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 31 0.50
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 31 0.50
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 31 0.50
Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 31 0.87
AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic catio... 31 0.87
Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical p... 29 2.0
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 29 2.0
U23147-4|AAC46689.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.7
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 29 3.5
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 29 3.5
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 3.5
AF039039-4|AAB94177.2| 591|Caenorhabditis elegans Hypothetical ... 29 3.5
Z49968-11|CAN86616.1| 492|Caenorhabditis elegans Hypothetical p... 28 4.6
Z49968-10|CAB54270.3| 490|Caenorhabditis elegans Hypothetical p... 28 4.6
Z49968-9|CAB54271.3| 492|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z49968-6|CAB54272.2| 474|Caenorhabditis elegans Hypothetical pr... 28 4.6
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 28 4.6
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 28 6.1
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 28 6.1
L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (spli... 27 8.1
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 57.2 bits (132), Expect = 9e-09
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Frame = +3
Query: 81 ATIALGFALGW-TSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLSVG---AMFGPFIGGF 248
A++ GF G+ TS V+ +L D P +P+ + W L+S+ A G + G
Sbjct: 31 ASVIGGFLFGYDTSVVSAAMLYMPDAPGLKPM---DTVWQEVLVSISPGMAAVGSLMSGT 87
Query: 249 LASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVLPMYCAEIA 428
+ IGRR IL +S +G ++ A N M+ GRV G+A+G ++P+Y E A
Sbjct: 88 SSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYLGETA 147
Query: 429 TDDTRG 446
RG
Sbjct: 148 PTHVRG 153
Score = 33.9 bits (74), Expect = 0.093
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 123 VNLKLLDPNDTPLSRPVTNDEIS-WIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVP 299
+N L D S ++N+ + WI LLS+ GPF+ L K+GRR L S
Sbjct: 295 INTILYYTADIIRSSGISNNHTTIWISVLLSLCNFIGPFVPMSLIEKVGRRIIFLFSCGL 354
Query: 300 LIVGFVLV 323
+++ V +
Sbjct: 355 VVLSLVFI 362
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +3
Query: 201 SLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVA---VQNVAMIYAGRVFW 371
S+ SVG MFG F GFLA K GR+ ++L +++ ++ V + MI GR
Sbjct: 105 SMFSVGGMFGSFCSGFLADKFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVFGRFLV 164
Query: 372 GLAVGMLYTVLPMYCAEIATDDTRG 446
GL G+ ++PM+ E+A + RG
Sbjct: 165 GLNCGITSGLVPMFLTELAPANLRG 189
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +3
Query: 150 DTPLSRPVTNDEISW--IGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLV 323
D LSR N +++W S+ +VG M G G+LA K+GRR ++ +++ + L+
Sbjct: 87 DKELSRE--NADLAWSVAVSVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALM 144
Query: 324 VAVQNVA---MIYAGRVFWGLAVGMLYTVLPMYCAEIATDDTRG 446
++V M+ GR+ GL G ++PM+ EI+ ++ RG
Sbjct: 145 GLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRG 188
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +3
Query: 150 DTPLSRPVTNDEISW--IGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLV 323
D LSR N +++W S+ +VG M G G+LA K+GRR ++ +++ + L+
Sbjct: 69 DKELSRE--NADLAWSVAVSVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALM 126
Query: 324 VAVQNVA---MIYAGRVFWGLAVGMLYTVLPMYCAEIATDDTRG 446
++V M+ GR+ GL G ++PM+ EI+ ++ RG
Sbjct: 127 GLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRG 170
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 48.8 bits (111), Expect = 3e-06
Identities = 35/134 (26%), Positives = 62/134 (46%)
Frame = +3
Query: 45 WRQYIIAGVANIATIALGFALGWTSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLSVGAM 224
W Y++A A I G+ G S L + PN + + +P+ + I S+ A
Sbjct: 26 WFVYMLAFSAVIGGFLFGYDTGIVSAAMLYV--PNASGI-KPLDSVWQEIIVSITPGVAA 82
Query: 225 FGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVL 404
G G + +GR+ I+ +SV +G ++ A ++ GR+ GLA+G ++
Sbjct: 83 IGSLCSGPGSDFLGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIV 142
Query: 405 PMYCAEIATDDTRG 446
P+Y +E + RG
Sbjct: 143 PIYVSEASPSHIRG 156
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 47.6 bits (108), Expect = 7e-06
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +3
Query: 81 ATIALGFALGW-TSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLSVGAMFGPFIGGFLAS 257
A I GF G+ TS V+ +L + P +P+ I S+ A G + G +
Sbjct: 32 AAIIGGFLFGYDTSVVSAAMLYVPEAPGLKPMGTVWKEVIVSITPGMAAVGAWFSGAGSD 91
Query: 258 KIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVLPMYCAEIATDD 437
+ GR+ I+ S++ + G V+ ++ GR+F G+ +G V+P+Y E +
Sbjct: 92 RYGRKPIIIGSTLIFVCGAVICAVAWTKIVMLIGRIFLGVGIGFASMVVPVYLGEASPTH 151
Query: 438 TRG 446
RG
Sbjct: 152 VRG 154
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 186 ISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLV 323
I WI +LS+ + GPF F K+GRR L S ++V VL+
Sbjct: 318 IIWISVILSICNLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLI 363
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 47.2 bits (107), Expect = 9e-06
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Frame = +3
Query: 168 PVTNDEISWIGSLLSV----GAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQ 335
P+++ + + SLL+V +FG F+ G++ S+ GR+ + L++S I G +L A +
Sbjct: 82 PISDSTLHLLWSLLNVCFPIATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAAAK 141
Query: 336 ----NVAMIYAGRVFWGLAVGMLYTVLPMYCAEIATDDTRG 446
+++ GR+ W LA G+ ++ E A RG
Sbjct: 142 WCFPAFELLFVGRIIWSLANGVNTVNATVWIVECAPPQIRG 182
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Frame = +3
Query: 51 QYIIAGVANIATIALGFALGWTSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLSVGAMFG 230
Q+ GV N A + + T +N +D PLS V+N S++ S +++GA+ G
Sbjct: 20 QFYSYGVVNPAQVVI------TDWINQTYIDRYKAPLSLTVSNVIWSFVVSSIAIGAILG 73
Query: 231 PFIGGFLASKIGRRWSILLSSVPLIVG--FVLVV-AVQNVAMIYAGRVFWGLAVGMLYTV 401
+ K GRR + + + + F LV + ++ GR +G+ +G+ +
Sbjct: 74 ASFTRIIGEKYGRRNGMFFNGILNVFAALFELVAKRFSSPELLIFGRFVYGINMGLSSGL 133
Query: 402 LPMYCAEIATDDTRG 446
+PMY EI RG
Sbjct: 134 VPMYLMEITPYKYRG 148
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +3
Query: 213 VGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGML 392
+G + G GFLA K GRR L S + I VL A+ N+ Y R+ G++V
Sbjct: 124 IGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIGISVSGT 183
Query: 393 YTVLPMYCAEIATDDTR 443
TV Y E+ + + R
Sbjct: 184 LTVGWTYATEMISPNRR 200
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/81 (22%), Positives = 43/81 (53%)
Frame = +3
Query: 174 TNDEISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIY 353
+N + + SLL GA+ G F+ GFL+ ++GR+ P+ +G +L++ + ++ + +
Sbjct: 111 SNQTTAMMSSLLMWGALIGSFVCGFLSDRLGRK--------PVYLGCLLMITIGHILLTF 162
Query: 354 AGRVFWGLAVGMLYTVLPMYC 416
+ + W + + + +C
Sbjct: 163 SMYLSW-MTINATLAAMGFFC 182
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 35.1 bits (77), Expect = 0.040
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 213 VGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGML 392
+G + G I G+L+ IGRR + S + + +L A+ +V Y R G A+
Sbjct: 115 LGTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGFAIAGT 174
Query: 393 YTVLPMYCAEIATDDTR 443
TV Y +E+ R
Sbjct: 175 LTVGWTYASEMVIPSRR 191
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 34.7 bits (76), Expect = 0.054
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Frame = +3
Query: 27 MEQGQLWRQYIIAGVANIA-TIALGFALGWTSP--------VNLKLLDPNDTPLSRPVTN 179
M + +R +A + +IA + GF L T+P +N L D LS
Sbjct: 1 MVEAPSFRMICVAVITSIAGSFHFGFNLVLTNPSQEAFLNFMNQTLAKRFDGGLSDNTLQ 60
Query: 180 DEISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLS-SVPLIVGFVLVVA--VQNVAMI 350
+ S++ ++L +GA+ G F +A IGR+ + +S +V ++ G + + + + +
Sbjct: 61 NIWSFVVAILFLGALAGSFSIRLIADWIGRKNGLYISIAVGVLAGGMSIASKFIPLFELY 120
Query: 351 YAGRVFWGLAVGMLYTVLPMYCAEIATDDTRGA 449
A R+ G +V + + ++ +E + RGA
Sbjct: 121 IASRIVMGWSVSVSLGLSALFLSEASPKQNRGA 153
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 33.9 bits (74), Expect = 0.093
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 180 DEISWIG---SLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMI 350
D+ +WI + VG+ G + G++A K GRR S + LIV +++
Sbjct: 149 DQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIESF 208
Query: 351 YAGRVFWGLAVGMLYTVLPMYCAEIATDDTR 443
R F GLA L+ + + C E + R
Sbjct: 209 IILRFFTGLAFPALFQIPFIICMEFMGNSGR 239
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 33.9 bits (74), Expect = 0.093
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 180 DEISWIG---SLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMI 350
D+ +WI + VG+ G + G++A K GRR S + LIV +++
Sbjct: 132 DQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIESF 191
Query: 351 YAGRVFWGLAVGMLYTVLPMYCAEIATDDTR 443
R F GLA L+ + + C E + R
Sbjct: 192 IILRFFTGLAFPALFQIPFIICMEFMGNSGR 222
>U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 7 protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.093
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 216 GAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAV----QNVAMIYAGRVFWGLAV 383
G G F+ ++ + GR+ +++ ++ ++G VL + + V + GR+ G+
Sbjct: 112 GLAIGCFVAVLMSHRHGRKLPVVVGTILDVIGVVLTLLITSVPHGVTVATVGRLINGIGQ 171
Query: 384 GMLYTVLPMYCAEIATDDTRG 446
GM+ T + +E+ TRG
Sbjct: 172 GMVQTAGSVMLSELPPLKTRG 192
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 33.9 bits (74), Expect = 0.093
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 180 DEISWIG---SLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMI 350
D+ +WI + VG+ G + G++A K GRR S + LIV +++
Sbjct: 132 DQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIESF 191
Query: 351 YAGRVFWGLAVGMLYTVLPMYCAEIATDDTR 443
R F GLA L+ + + C E + R
Sbjct: 192 IILRFFTGLAFPALFQIPFIICMEFMGNSGR 222
>AF016679-5|AAB66157.1| 485|Caenorhabditis elegans Hypothetical
protein T28C12.2 protein.
Length = 485
Score = 32.7 bits (71), Expect = 0.22
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +3
Query: 87 IALGFALGWTSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLSVGAMFGPFIGGFLASK-I 263
I L F +G V + P + L + D + WI + S+G I GF K +
Sbjct: 37 IFLQFIVGVQISVYYMSMWPYLSGLDKTADVDFLGWIVAACSIGCTISNPIYGFWNQKTM 96
Query: 264 GRRWSILLSSVPLIVGFV---LVVAVQNV--AMIYAGRVFWGLAVGMLYTVLPMYCAEIA 428
+W + + VG V L+ NV M++A R F GL VG + L +Y A +
Sbjct: 97 SVKWPAITGFLIAAVGQVWYGLLTVATNVKWLMLFA-RFFTGLGVGNI-AALRVYAATAS 154
Query: 429 TDDTR 443
T R
Sbjct: 155 TPKDR 159
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +3
Query: 189 SWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLS-SVPLIVGFVLVVA--VQNVAMIYAG 359
S++ ++L +GA+ G F F+A +GR+ + +S SV ++ G + + + + +
Sbjct: 64 SFVVAVLFLGALAGSFSIPFIAEGVGRKNGLYISISVGVLAGGMSIASKFIPLFELYIIS 123
Query: 360 RVFWGLAVGMLYTVLPMYCAEIATDDTRGA 449
RV G +V + + ++ +E + RGA
Sbjct: 124 RVVMGWSVSVSLGLSGIFLSEASPKQNRGA 153
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 31.5 bits (68), Expect = 0.50
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 590 RHEEEQHAEDRDYSYPDILQREIGDERSHSV-HQQEAKHYEQLKERSQ 450
RHEEEQHA+ +DY +RE +E + +QE + E+ +E +
Sbjct: 63 RHEEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKE 110
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 31.5 bits (68), Expect = 0.50
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 590 RHEEEQHAEDRDYSYPDILQREIGDERSHSV-HQQEAKHYEQLKERSQ 450
RHEEEQHA+ +DY +RE +E + +QE + E+ +E +
Sbjct: 897 RHEEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKE 944
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 31.5 bits (68), Expect = 0.50
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 590 RHEEEQHAEDRDYSYPDILQREIGDERSHSV-HQQEAKHYEQLKERSQ 450
RHEEEQHA+ +DY +RE +E + +QE + E+ +E +
Sbjct: 63 RHEEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKE 110
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -3
Query: 580 KNSTQKTATTAIPTYCSVK*GTNGPTPYTSRKPSTTNS*RNDPRAPRVSSVAIS 419
K + TA++ + T S+ ++ P P TS P+++ S R PR P VA S
Sbjct: 161 KPDSISTASSVVGTPSSISSSSSTPPPSTSPVPTSSGSGRRKPRCPMKIVVAES 214
>Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical
protein ZK455.8b protein.
Length = 414
Score = 30.7 bits (66), Expect = 0.87
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 210 SVGAMFGPFIGGFLASKIGRRWSIL-LSSVPLIVGFVL 320
S+G + G F+GGF++ + GR+ +I + ++ GF+L
Sbjct: 27 SLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLL 64
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 30.7 bits (66), Expect = 0.87
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 210 SVGAMFGPFIGGFLASKIGRRWSIL-LSSVPLIVGFVL 320
S+G + G F+GGF++ + GR+ +I + ++ GF+L
Sbjct: 315 SLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLL 352
>AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic cation
transporter protein.
Length = 414
Score = 30.7 bits (66), Expect = 0.87
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 210 SVGAMFGPFIGGFLASKIGRRWSIL-LSSVPLIVGFVL 320
S+G + G F+GGF++ + GR+ +I + ++ GF+L
Sbjct: 27 SLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLL 64
>Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical
protein C35A5.3 protein.
Length = 460
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 174 TNDEISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVL--VVAVQNVAM 347
T+DE +I + G +FG ++ K G +W L++ + + L + A ++ +
Sbjct: 60 TSDEKKYIMWAVGAGTIFGTIPTNWVVVKYGAKWPFLVAGLVSLFSTALIPIAAKTSLTL 119
Query: 348 IYAGRVFWGLA 380
RV GLA
Sbjct: 120 FLFLRVLQGLA 130
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 29.5 bits (63), Expect = 2.0
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Frame = +3
Query: 174 TNDEISWIGSLLS--VGAMFGPFIGGFLASKIGRRWSIL-LSSVPLIVGFVLVVAVQNVA 344
T + + W ++ S VGA+ G I + SK G + ++ L++V LI G +L+ +
Sbjct: 78 TEESLVWSLTVSSQGVGALIGCLIVSPI-SKFGAKDVLMRLNNVILIAGSLLMFLSYWIT 136
Query: 345 MIYA---GRVFWGLAVGMLYTVLPMYCAEIATDDTRGA 449
A GR+ G+ G+ P+Y +I + +G+
Sbjct: 137 FPIAFIVGRILTGVYTGLACAFAPLYLQQIIPKNIKGS 174
>U23147-4|AAC46689.1| 464|Caenorhabditis elegans Hypothetical
protein C18H9.5 protein.
Length = 464
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 177 NDEISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMI-- 350
+ +IS S +VGA+FG L SK G R + + + G +L+ N +I
Sbjct: 78 SSDISLTFSAAAVGAIFGTVPAVTLISKYGIRKVLTVYGLLSAGGTLLMPLAVNYGLIPV 137
Query: 351 YAGRVFWGLAVGMLYT 398
R+F G+ +LY+
Sbjct: 138 LIARLFQGVGASILYS 153
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 590 RHEEEQHAEDRDYSYPDILQRE-IGDERSHSVHQQEAKHYEQLKERSQGTAR 438
RHEEE+ A+ DY +L++E I E +QE + E+ ++ Q R
Sbjct: 73 RHEEEEAAKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAER 124
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 590 RHEEEQHAEDRDYSYPDILQRE-IGDERSHSVHQQEAKHYEQLKERSQGTAR 438
RHEEE+ A+ DY +L++E I E +QE + E+ ++ Q R
Sbjct: 73 RHEEEEAAKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAER 124
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -2
Query: 590 RHEEEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGD 423
RHEEE+ A+ DY +L++E ++ + +++ K + +E + A R D
Sbjct: 82 RHEEEEAAKLLDYEQRRVLEKEQMEQELRELKEKQEKRRAEREEDERQFAERRRQD 137
>AF039039-4|AAB94177.2| 591|Caenorhabditis elegans Hypothetical
protein T08B1.1 protein.
Length = 591
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/54 (20%), Positives = 28/54 (51%)
Frame = +3
Query: 177 NDEISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQN 338
+D++ +I +++ ++ G IGG + GR+ + +I+ ++ A Q+
Sbjct: 131 SDKVEYIEVIMAGSSLIGSIIGGHMGDHFGRQTIFFTGELLIIITSMMCTAAQS 184
>Z49968-11|CAN86616.1| 492|Caenorhabditis elegans Hypothetical
protein M110.5d protein.
Length = 492
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 256 EARKPPMNGPNIAPTERRDPIHDISSLV 173
+AR PP+ P +APT+ RDP SS +
Sbjct: 341 QARPPPL--PTVAPTQYRDPFSVHSSAI 366
>Z49968-10|CAB54270.3| 490|Caenorhabditis elegans Hypothetical
protein M110.5a protein.
Length = 490
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 256 EARKPPMNGPNIAPTERRDPIHDISSLV 173
+AR PP+ P +APT+ RDP SS +
Sbjct: 339 QARPPPL--PTVAPTQYRDPFSVHSSAI 364
>Z49968-9|CAB54271.3| 492|Caenorhabditis elegans Hypothetical
protein M110.5b protein.
Length = 492
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 256 EARKPPMNGPNIAPTERRDPIHDISSLV 173
+AR PP+ P +APT+ RDP SS +
Sbjct: 339 QARPPPL--PTVAPTQYRDPFSVHSSAI 364
>Z49968-6|CAB54272.2| 474|Caenorhabditis elegans Hypothetical
protein M110.5c protein.
Length = 474
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 256 EARKPPMNGPNIAPTERRDPIHDISSLV 173
+AR PP+ P +APT+ RDP SS +
Sbjct: 323 QARPPPL--PTVAPTQYRDPFSVHSSAI 348
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +3
Query: 45 WRQYIIAGVANIATI-ALGFALGW--TSPVNLKLLDPNDTPLSRPVTNDEISWIGSLLS- 212
W+ I++ V I I +G+ + T+ + ++ ++N E W S +
Sbjct: 6 WKLLILSAVLAITAIFQMGYTNAYPNTAIGSFRIFLNESANEPYTLSNSEFEWAWSAMLA 65
Query: 213 ---VGAMFGPFIGGFLASKIGRRWSILLSS 293
+G G I +A +IGR+W++ L +
Sbjct: 66 IYFIGFAAGSVISAGVADRIGRKWTLFLGT 95
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 571 TQKTATTAIPTYCSVK*GTNGPTPYTSRKPSTTNS 467
T T TT P + T P P T++KP+TT +
Sbjct: 420 TTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTT 454
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 189 SWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVA 329
+WI ++ +GA+ G + G L GR+ +S V + +G + VA
Sbjct: 97 AWIATIQFIGALVGALVYGHLGDHFGRK---PVSFVGISIGIIFGVA 140
>L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (splicing
factor) relatedprotein 8 protein.
Length = 2329
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 105 LGW--TSPVNLKLLDPNDTPLSRPVTNDEISWIG 200
LGW T P L L P D + D ISW G
Sbjct: 2168 LGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDG 2201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,037,159
Number of Sequences: 27780
Number of extensions: 384677
Number of successful extensions: 1468
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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