Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c10f
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.048
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 25 0.45
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 24 1.4
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.4
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 23 2.4
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.4
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 23 2.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 4.2
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 9.6
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 9.6
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 9.6
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 28.7 bits (61), Expect = 0.048
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 291 SVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGM 389
S PLI+G + VQ++ + AGR+F L GM
Sbjct: 175 SCPLILGSCKCIYVQSINLCMAGRLFGYLCPGM 207
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 25.4 bits (53), Expect = 0.45
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 512 RSHSVHQQEAKHYEQLKERSQ 450
R HS ++Q+ K EQ++ER +
Sbjct: 57 RQHSKNEQQRKEMEQMRERER 77
Score = 24.6 bits (51), Expect = 0.78
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -2
Query: 608 IIHRGFRHEEEQHAEDRDYSYPDILQREIGDERSHSVHQQEAKHYEQLKERSQGTARV 435
I HR E+Q E + QRE D R S QQ+ + +Q ++ Q +R+
Sbjct: 54 IYHRQHSKNEQQRKEMEQMREREREQREHSD-RVTSQQQQQQQQQQQQDQQQQQQSRM 110
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 218 SYVRTIHRRFPGFKNRSSMEYSSVICSTHSRFCFGGGRSK 337
S V+ H P ++RSS +S CS H+ CF GG K
Sbjct: 269 SDVQPGHGSPPVKQHRSSS--ASTTCSGHTVRCFTGGPRK 306
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 131 EALRS*RHTLVATRHQRRNIMDRIPSLRRSYV 226
E L R + R+QR+N++DR+ + R V
Sbjct: 433 EYLNHLRANVAEGRNQRKNVLDRLFRMDRDAV 464
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 471 TAEGTIPGHRACRPWRSRRSTSAKPYT-AYRLPDPRTLCRRKSLQHFERPPPK 316
+A ++ GHR R R + KPY ++ P P+ L + F PK
Sbjct: 40 SASNSVHGHREGLGRRHRYNFQLKPYNPEHKPPGPKDLVYLEPSPPFCEKNPK 92
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 2.4
Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Frame = -2
Query: 602 HRGFRHEEEQHAE---DRDYSYPDILQREIGDERSHSVHQQEA-KHYEQLKERSQGTARV 435
H R+ E+ +R+Y D ++ +E+ + ++ + K Y + +ER Q + +
Sbjct: 215 HTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKN 274
Query: 434 VRG-----DLGAVHRQNRIQHTDCQTPEHSAGV-NHCNILNGHHQN 315
R + ++R + + P+ + + N CN N ++ N
Sbjct: 275 EREYRKYRETSKERSRDRRERERSKEPKIISSLSNSCNYSNNYYNN 320
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 471 TAEGTIPGHRACRPWRSRRSTSAKPYT-AYRLPDPRTLCRRKSLQHFERPPPK 316
+A ++ GHR R R + KPY ++ P P+ L + F PK
Sbjct: 41 SASNSVHGHREGLGRRHRYNFQLKPYNPEHKPPGPKDLVYLEPSPPFCEKNPK 93
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor
protein.
Length = 996
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 24 NMEQGQLWRQYIIAGVA 74
N ++G WR Y++ VA
Sbjct: 49 NFDKGINWRSYVVCDVA 65
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 356 GVNHCNILNGH 324
G+N C +NGH
Sbjct: 32 GMNQCQAVNGH 42
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 356 GVNHCNILNGH 324
G+N C +NGH
Sbjct: 32 GMNQCQAVNGH 42
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 11 DASAQHGAGPIVETVHH 61
+A A H I+E+VHH
Sbjct: 8 EADASHCIQQILESVHH 24
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,423
Number of Sequences: 438
Number of extensions: 5174
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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