Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c09f
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    26   1.1  
AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...    26   1.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   1.9  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   9.9  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -2

Query: 274 VVMKRSGGCGQSVCTSGNTSINIFKSLNILKDFP--F*FLVKK 152
           ++++ S G  Q    +GN  + I K++ +  D P    FL+KK
Sbjct: 52  IILRDSHGVAQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKK 94


>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 211 NIFKSLNILKDFPF*FLVKKYCVVCPVNW 125
           ++ ++L ++K F F   V+K+  VCP NW
Sbjct: 67  SVDETLRLIKAFQF---VEKHGEVCPANW 92


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 400 DSQTRNRHDTLHLHPPERVTVPETAP 477
           + QTR R +T  L  PE    PET P
Sbjct: 52  EPQTRARSNTWPLPRPENFVEPETEP 77


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 373 MNNYLAYVSPSGVQLDFNGAREG*PGDINS 284
           +NN+    S +G Q+   G + G PG + S
Sbjct: 123 VNNFQYCYSTAGTQMGGPGTQMGGPGTVES 152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,182
Number of Sequences: 2352
Number of extensions: 13275
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)