Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c09f
(596 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 26 0.32
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 26 0.32
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.3
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 1.7
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 1.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 1.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 1.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 1.7
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 23 3.0
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 4.0
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 25.8 bits (54), Expect = 0.32
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 156 RNIVLFVL*IGSSGKACANTH 94
+N VLF+ +G+SG AC N H
Sbjct: 316 KNGVLFLGLVGNSGIACVNEH 336
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 25.8 bits (54), Expect = 0.32
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 329 QLYATRANVSEIVIHADDLEITSVILRQGTVTTPSTYTLQ 448
+LYA + +I+I DD+E T V R ++T + +Q
Sbjct: 10 ELYAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQ 49
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 252 PPDLFITTCFGLLISPG*PSLAPLKSSCTPL 344
PP +I + FG IS G P+ S+ PL
Sbjct: 361 PPSGYIRSAFGTPISTGRPATVEDTSASLPL 391
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 252 PPDLFITTCFGLLISPG*PSLAPLKSSCTPL 344
PP +I + FG IS G P+ S+ PL
Sbjct: 361 PPSGYIRSAFGTPISTGRPATVEDTSASLPL 391
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 252 PPDLFITTCFGLLISPG*PSLAPLKSSCTPL 344
PP +I + FG IS G P+ S+ PL
Sbjct: 361 PPSGYIRSAFGTPISTGRPATVEDTSASLPL 391
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 252 PPDLFITTCFGLLISPG*PSLAPLKSSCTPL 344
PP +I + FG IS G P+ S+ PL
Sbjct: 361 PPSGYIRSAFGTPISTGRPATVEDTSASLPL 391
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 252 PPDLFITTCFGLLISPG*PSLAPLKSSCTPL 344
PP +I + FG IS G P+ S+ PL
Sbjct: 361 PPSGYIRSAFGTPISTGRPATVEDTSASLPL 391
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 252 PPDLFITTCFGLLISPG*PSLAPLKSSCTPL 344
PP +I + FG IS G P+ S+ PL
Sbjct: 361 PPSGYIRSAFGTPISTGRPATVEDTSASLPL 391
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 252 PPDLFITTCFGLLISPG*PSLAPLKSSCTPL 344
PP +I + FG IS G P+ S+ PL
Sbjct: 429 PPSGYIRSAFGTPISTGRPATVEDTSASLPL 459
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 252 PPDLFITTCFGLLISPG*PSLAPLKSSCTPL 344
PP +I + FG IS G P+ S+ PL
Sbjct: 429 PPSGYIRSAFGTPISTGRPATVEDTSASLPL 459
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 77 IIFLAACVLAQAFPDEPIYRTNNTIFLDEKLEGE 178
++ +AA VL A PDE + I +DE L +
Sbjct: 8 LVLMAAIVLVAARPDESYTSKFDNINVDEILHSD 41
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 352 RKRDSYSCRRPGNHIRDSQTRNR 420
RK SY+CR + I D + RNR
Sbjct: 139 RKDLSYACREEKSCIIDKRQRNR 161
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 77 IIFLAACVLAQAFPDEPIYRTNNTIFLDEKLEGE 178
++ +AA VL A PDE + I +DE L +
Sbjct: 8 LVLMAAIVLVAARPDESYTSKFDNINVDEILHSD 41
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 77 IIFLAACVLAQAFPDEPIYRTNNTIFLDEKLEGE 178
++ +AA VL A PDE + I +DE L +
Sbjct: 8 LVLMAAIVLVAARPDESYTSKFDNINVDEILHSD 41
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 352 RKRDSYSCRRPGNHIRDSQTRNR 420
RK SY+CR + I D + RNR
Sbjct: 139 RKDLSYACREEKSCIIDKRQRNR 161
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = -1
Query: 548 EQRNQWSVCKSQEKQH*RRECPY*GAVSGTVTLSGGCK 435
E N W +C Q +C V+L+GG K
Sbjct: 23 ELPNNWRICDRSLPQKEYNQCIAEAVRDAVVSLAGGLK 60
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 156 RNIVLFVL*IGSSGKACANTH 94
+N VLFV +G+S C N H
Sbjct: 311 KNGVLFVGLVGNSAVGCWNEH 331
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,969
Number of Sequences: 438
Number of extensions: 3503
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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