Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c07r
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5HK87 Cluster: CRISPR-associated protein Cas1; n=1; St...    33   7.3  
UniRef50_Q8YRQ5 Cluster: Asr3389 protein; n=2; Nostoc|Rep: Asr33...    33   9.7  
UniRef50_Q08650 Cluster: Diacylglycerol O-acyltransferase 1; n=3...    33   9.7  

>UniRef50_Q5HK87 Cluster: CRISPR-associated protein Cas1; n=1;
           Staphylococcus epidermidis RP62A|Rep: CRISPR-associated
           protein Cas1 - Staphylococcus epidermidis (strain ATCC
           35984 / RP62A)
          Length = 301

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 51  FKDNFVLTILIKHNIDVFNLNFKYTPFLTPLIYKCCRIFIKVKKSLE 191
           F DN V  I+ K NID F++N K    L  ++Y+ C I  KV + L+
Sbjct: 226 FVDNIVYEIVFKKNIDTFDINEK--KLLLNVLYERCIIDKKVVRLLD 270


>UniRef50_Q8YRQ5 Cluster: Asr3389 protein; n=2; Nostoc|Rep: Asr3389
           protein - Anabaena sp. (strain PCC 7120)
          Length = 75

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +3

Query: 351 QINILHKFIHHYFIEKLKYKIPN*TSLSEMTPVEELYIYVEEMLLD 488
           Q+N++  F+  YF +  +Y IP+      +TP EE Y+   ++L D
Sbjct: 28  QLNLIPSFVVRYFADSRQYYIPDEIKSESLTP-EEAYMRFRKLLED 72


>UniRef50_Q08650 Cluster: Diacylglycerol O-acyltransferase 1; n=3;
           Saccharomycetaceae|Rep: Diacylglycerol O-acyltransferase
           1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 418

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +3

Query: 3   ILNYKR*SNIMLIHVYFKDNFVLTILIKHNIDVFNLNFKYTPFLTPL 143
           +L+ K+ S +  + ++FK+NF  TI I +   +FN +F   PF  P+
Sbjct: 317 VLSTKKDSVLGKMQLWFKENFGFTIPIFYARGLFNYDFGLLPFRAPI 363


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,460,859
Number of Sequences: 1657284
Number of extensions: 13132297
Number of successful extensions: 25652
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25649
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)