Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c07r
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15447-1|CAA33487.1| 376|Homo sapiens alcohol dehydrogenase pro... 30 7.5
X03350-1|CAA27056.1| 375|Homo sapiens protein ( Human mRNA for ... 30 7.5
M24317-1|AAA51884.1| 375|Homo sapiens ADH2 protein. 30 7.5
M24316-1|AAB59496.1| 375|Homo sapiens alcohol dehydrogenase bet... 30 7.5
M21692-1|AAA51592.1| 375|Homo sapiens ADH2 protein. 30 7.5
L38290-1|AAB48003.1| 375|Homo sapiens alcohol dehydrogenase bet... 30 7.5
D00137-1|BAA00084.1| 375|Homo sapiens alcohol dehydrogenase bet... 30 7.5
DQ017646-1|AAY22180.1| 375|Homo sapiens alcohol dehydrogenase I... 30 7.5
BC033009-1|AAH33009.1| 375|Homo sapiens alcohol dehydrogenase I... 30 7.5
AF153821-1|AAD37446.1| 375|Homo sapiens alcohol dehydrogenase b... 30 7.5
>X15447-1|CAA33487.1| 376|Homo sapiens alcohol dehydrogenase
protein.
Length = 376
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 287 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 325
>X03350-1|CAA27056.1| 375|Homo sapiens protein ( Human mRNA for
alcohol dehydrogenase beta-1-subunit (ADH1-2
allele).peptide exon. ).
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
>M24317-1|AAA51884.1| 375|Homo sapiens ADH2 protein.
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
>M24316-1|AAB59496.1| 375|Homo sapiens alcohol dehydrogenase beta-1
subunit protein.
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
>M21692-1|AAA51592.1| 375|Homo sapiens ADH2 protein.
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
>L38290-1|AAB48003.1| 375|Homo sapiens alcohol dehydrogenase beta-3
subunit protein.
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
>D00137-1|BAA00084.1| 375|Homo sapiens alcohol dehydrogenase beta 1
protein.
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
>DQ017646-1|AAY22180.1| 375|Homo sapiens alcohol dehydrogenase IB
(class I), beta polypeptide protein.
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
>BC033009-1|AAH33009.1| 375|Homo sapiens alcohol dehydrogenase IB
(class I), beta polypeptide protein.
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
>AF153821-1|AAD37446.1| 375|Homo sapiens alcohol dehydrogenase
beta2 subunit protein.
Length = 375
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 642 SCGYTFIIGTXIFYSLSINLSINALTICQGRLWTPCLHGSIK 517
+CG + I+G S NLSIN + + GR W ++G K
Sbjct: 286 ACGTSVIVGVP---PASQNLSINPMLLLTGRTWKGAVYGGFK 324
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,270,604
Number of Sequences: 237096
Number of extensions: 1939168
Number of successful extensions: 2849
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2849
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -