Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c07r
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   2.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.1  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 434 TETCLVWYFVF*FFNKIVMYK 372
           T   L+ YF+F +FN +V ++
Sbjct: 14  TSFILINYFIFLYFNSLVRFR 34


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 474 LQHRYIIPRPVSSH*DLFSLVF 409
           +QH +  P P++S  +L  L F
Sbjct: 348 IQHHFFYPDPLASKYELHGLKF 369


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +2

Query: 653 DVRATRDATASAVSIGRSTVWLTP 724
           D++  +D  +  +  G + +WL+P
Sbjct: 48  DLKGIKDKLSHFIESGITAIWLSP 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,169
Number of Sequences: 438
Number of extensions: 4336
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)