Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c06r
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071243-1|AAL48865.1|  443|Drosophila melanogaster RE28421p pro...    31   1.6  
AF160947-1|AAD46887.1|  844|Drosophila melanogaster LD24485p pro...    31   2.1  
AF073179-1|AAD27760.1|  844|Drosophila melanogaster glycogen pho...    31   2.1  
AF073178-1|AAD27759.1|  844|Drosophila melanogaster glycogen pho...    31   2.1  
AF073177-1|AAD41649.1|  844|Drosophila melanogaster glycogen pho...    31   2.1  
AE014134-341|AAZ66442.1|  844|Drosophila melanogaster CG7254-PB,...    31   2.1  
AE014134-340|AAF51303.1|  844|Drosophila melanogaster CG7254-PA,...    31   2.1  

>AY071243-1|AAL48865.1|  443|Drosophila melanogaster RE28421p
           protein.
          Length = 443

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -3

Query: 461 KREPELVSNLMPITFFDNIA-CCSHLPIAYFILETIRRCSFFCLLMFAI--VLDYP 303
           KR  +L+   MP  ++  +  CC  + + Y +L   + C   CL  F++  V  YP
Sbjct: 224 KRFKQLIFTSMPNAYYTGLVPCCLAVSVQYNVLRAAQHCIIVCLGAFSLCAVFLYP 279


>AF160947-1|AAD46887.1|  844|Drosophila melanogaster LD24485p
           protein.
          Length = 844

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 137 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 241
           SSMF   +++I   Y R +LNC+ +   Y+ IKKD
Sbjct: 561 SSMFDIQVKRI-HEYKRQLLNCLHIITLYNRIKKD 594


>AF073179-1|AAD27760.1|  844|Drosophila melanogaster glycogen
           phosphorylase protein.
          Length = 844

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 137 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 241
           SSMF   +++I   Y R +LNC+ +   Y+ IKKD
Sbjct: 561 SSMFDIQVKRI-HEYKRQLLNCLHIITLYNRIKKD 594


>AF073178-1|AAD27759.1|  844|Drosophila melanogaster glycogen
           phosphorylase protein.
          Length = 844

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 137 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 241
           SSMF   +++I   Y R +LNC+ +   Y+ IKKD
Sbjct: 561 SSMFDIQVKRI-HEYKRQLLNCLHIITLYNRIKKD 594


>AF073177-1|AAD41649.1|  844|Drosophila melanogaster glycogen
           phosphorylase protein.
          Length = 844

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 137 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 241
           SSMF   +++I   Y R +LNC+ +   Y+ IKKD
Sbjct: 561 SSMFDIQVKRI-HEYKRQLLNCLHIITLYNRIKKD 594


>AE014134-341|AAZ66442.1|  844|Drosophila melanogaster CG7254-PB,
           isoform B protein.
          Length = 844

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 137 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 241
           SSMF   +++I   Y R +LNC+ +   Y+ IKKD
Sbjct: 561 SSMFDIQVKRI-HEYKRQLLNCLHIITLYNRIKKD 594


>AE014134-340|AAF51303.1|  844|Drosophila melanogaster CG7254-PA,
           isoform A protein.
          Length = 844

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 137 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 241
           SSMF   +++I   Y R +LNC+ +   Y+ IKKD
Sbjct: 561 SSMFDIQVKRI-HEYKRQLLNCLHIITLYNRIKKD 594


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,125,230
Number of Sequences: 53049
Number of extensions: 526316
Number of successful extensions: 853
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)