Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c06f
         (566 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002906-1|AAH02906.2|  261|Homo sapiens uridine-cytidine kinase...    31   3.7  
AL451074-10|CAH74066.1|  261|Homo sapiens uridine-cytidine kinas...    31   3.7  
AL358115-1|CAI15121.1|  261|Homo sapiens uridine-cytidine kinase...    31   3.7  
AF236637-1|AAK14053.1|  261|Homo sapiens uridine-cytidine kinase...    31   3.7  
AB062451-1|BAB56162.1|  247|Homo sapiens uridine-cytidine kinase...    31   3.7  

>BC002906-1|AAH02906.2|  261|Homo sapiens uridine-cytidine kinase 2
           protein.
          Length = 261

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 285 TLFQATNIAIIKVNACDFVSHNKWREATVTYKCAARLLIESVIKHYS 425
           TL + T    +++   DFVSH++ +E TVT   A  +L E ++  YS
Sbjct: 97  TLKEITEGKTVQIPVYDFVSHSR-KEETVTVYPADVVLFEGILAFYS 142


>AL451074-10|CAH74066.1|  261|Homo sapiens uridine-cytidine kinase 2
           protein.
          Length = 261

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 285 TLFQATNIAIIKVNACDFVSHNKWREATVTYKCAARLLIESVIKHYS 425
           TL + T    +++   DFVSH++ +E TVT   A  +L E ++  YS
Sbjct: 97  TLKEITEGKTVQIPVYDFVSHSR-KEETVTVYPADVVLFEGILAFYS 142


>AL358115-1|CAI15121.1|  261|Homo sapiens uridine-cytidine kinase 2
           protein.
          Length = 261

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 285 TLFQATNIAIIKVNACDFVSHNKWREATVTYKCAARLLIESVIKHYS 425
           TL + T    +++   DFVSH++ +E TVT   A  +L E ++  YS
Sbjct: 97  TLKEITEGKTVQIPVYDFVSHSR-KEETVTVYPADVVLFEGILAFYS 142


>AF236637-1|AAK14053.1|  261|Homo sapiens uridine-cytidine kinase 2
           protein.
          Length = 261

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 285 TLFQATNIAIIKVNACDFVSHNKWREATVTYKCAARLLIESVIKHYS 425
           TL + T    +++   DFVSH++ +E TVT   A  +L E ++  YS
Sbjct: 97  TLKEITEGKTVQIPVYDFVSHSR-KEETVTVYPADVVLFEGILAFYS 142


>AB062451-1|BAB56162.1|  247|Homo sapiens uridine-cytidine kinase 2
           protein.
          Length = 247

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 285 TLFQATNIAIIKVNACDFVSHNKWREATVTYKCAARLLIESVIKHYS 425
           TL + T    +++   DFVSH++ +E TVT   A  +L E ++  YS
Sbjct: 83  TLKEITEGKTVQIPVYDFVSHSR-KEETVTVYPADVVLFEGILAFYS 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,940,600
Number of Sequences: 237096
Number of extensions: 1456142
Number of successful extensions: 1926
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)