Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c05r
(759 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W281 Cluster: CG6758-PA; n=2; Sophophora|Rep: CG6758-... 75 3e-12
UniRef50_UPI0000D5744F Cluster: PREDICTED: similar to CG6758-PA;... 73 8e-12
UniRef50_UPI00003C01BB Cluster: PREDICTED: similar to F-box only... 60 8e-08
UniRef50_Q7Q0B3 Cluster: ENSANGP00000011589; n=2; Culicidae|Rep:... 52 1e-05
UniRef50_Q6P3S6 Cluster: F-box only protein 42; n=34; Euteleosto... 37 0.47
UniRef50_Q872H9 Cluster: Putative uncharacterized protein B24G20... 36 1.1
UniRef50_Q92355 Cluster: Helicase sen1; n=1; Schizosaccharomyces... 35 2.5
UniRef50_UPI00006CE925 Cluster: hypothetical protein TTHERM_0056... 33 5.8
UniRef50_Q8A869 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A3VWY6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A2DU00 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q967S7 Cluster: Retrovirus-related Gag polyprotein from... 33 5.8
>UniRef50_Q9W281 Cluster: CG6758-PA; n=2; Sophophora|Rep: CG6758-PA
- Drosophila melanogaster (Fruit fly)
Length = 667
Score = 74.5 bits (175), Expect = 3e-12
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Frame = -3
Query: 721 KKDLAIKRNKNKNKGLKIVRQLQEANKYRMAAFACDS-SINNSAPENDLIN---QRQIAH 554
+++LA++ N+ + K +L E + +RMAAF + S + S N+ I ++ A
Sbjct: 498 QRNLALRCRDNEPRLPKRFDELYE-DPFRMAAFNVPTRSRSASRDHNERIRRMEEKMNAI 556
Query: 553 LEHRRELPPQ-DIAQQ--RQPAVKKIKRNTLSMHVLDISTVLN--ENTLNYVSWLCPRLG 389
RR P + Q R P+ K+++ N S+ V DIS +L+ E L +V + G
Sbjct: 557 RNSRRSAPAAAQVEPQPLRAPSPKRLRCNVQSLFVCDISGILDSSEPALEWVEY--KNFG 614
Query: 388 EMNGAPEELVMYSLVKGNGELIMFGGVHNDISILTFSEHQNMYSNSLHF 242
+ GAP+ L++ SL+ GNGELI+FGGVH + T ++ + SNS+HF
Sbjct: 615 VLKGAPDRLILSSLIAGNGELILFGGVHKE----TLTDITHHVSNSIHF 659
>UniRef50_UPI0000D5744F Cluster: PREDICTED: similar to CG6758-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG6758-PA - Tribolium castaneum
Length = 536
Score = 72.9 bits (171), Expect = 8e-12
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Frame = -3
Query: 604 NNSAPENDLINQRQIAHLEHRRELPPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENT 425
NN ++D I ++++A L +E ++ +K K + L ++VLD+S L+
Sbjct: 417 NNRLSKSDRIREQRLARLSEIKE------NMKKNKKEEKNKSHYLGIYVLDLSKALSSRP 470
Query: 424 LNYVSWLCPRLGEMNGAPEELVMYSLVKGNGELIMFGGVHNDISILTFSEHQN-MYSNSL 248
YV+WL P+ + PEE ++Y+L+ G EL+MFGG+ D + L FS + N SNSL
Sbjct: 471 --YVTWLPPK--NLGNGPEETILYTLLAGKSELVMFGGIRKDPTSLGFSVNFNSQISNSL 526
Query: 247 HF 242
HF
Sbjct: 527 HF 528
>UniRef50_UPI00003C01BB Cluster: PREDICTED: similar to F-box only
protein 42; n=2; Apocrita|Rep: PREDICTED: similar to
F-box only protein 42 - Apis mellifera
Length = 526
Score = 59.7 bits (138), Expect = 8e-08
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Frame = -3
Query: 571 QRQIAHLEHRRELPPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRL 392
QRQ+ L R E ++ Q +PA KK K NTLS+ VLDI+ VL E SW+ +
Sbjct: 413 QRQLESLR-RMEESIRNRRAQSKPA-KKTK-NTLSIFVLDITNVLCEECS--ASWIPLKH 467
Query: 391 GEMNGAPEELVMYSLVKGNGELIMFGGVHNDISILTFSEHQNM----YSNSLHF 242
+ +G P E ++YSLV G GELI+FGG+ + + + H +M N LHF
Sbjct: 468 NDQSG-PNERILYSLVAGRGELIVFGGIGKEQA--SIQNHPDMDEPEVYNDLHF 518
>UniRef50_Q7Q0B3 Cluster: ENSANGP00000011589; n=2; Culicidae|Rep:
ENSANGP00000011589 - Anopheles gambiae str. PEST
Length = 620
Score = 52.4 bits (120), Expect = 1e-05
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Frame = -3
Query: 664 RQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLEHRRELPPQD-----IAQQRQP 500
+Q E N M AF+ DSS N A ++R++ L RE+ D P
Sbjct: 472 QQNLEHNHMAMVAFSVDSS--NHASNASFSHERKL-ELHGIREVNNADRSINSTGGSPDP 528
Query: 499 AV-KKIKRNTLSMHVLDISTVLNENTLN-YVSWL-CPRLGEMNGAPEELVMYSLVKGNGE 329
K++KRN L++ V D+S +L + W G + GAP+ +++ GNGE
Sbjct: 529 VTPKRVKRNGLAIFVCDVSNLLPTGGAEPCIEWQESKNSGLIAGAPDHYTFSTMINGNGE 588
Query: 328 LIMFGGVHNDISILTFSEHQNM-YSNSLHF 242
LI+FGG++ + + +N+ SNS+HF
Sbjct: 589 LIVFGGLNKN------HKSENLCVSNSVHF 612
>UniRef50_Q6P3S6 Cluster: F-box only protein 42; n=34;
Euteleostomi|Rep: F-box only protein 42 - Homo sapiens
(Human)
Length = 717
Score = 37.1 bits (82), Expect = 0.47
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = -3
Query: 532 PPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEMNGAPEELVMY 353
PPQ + +P + + + M+VLDI + V W + G PE ++
Sbjct: 625 PPQSL-NVGKPLYQSMNCKPMQMYVLDIKDTKEKGR---VKWKVFNSSSVVGPPETS-LH 679
Query: 352 SLVKGNGELIMFGGV 308
++V+G GELI+FGG+
Sbjct: 680 TVVQGRGELIIFGGL 694
>UniRef50_Q872H9 Cluster: Putative uncharacterized protein
B24G20.100; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein B24G20.100 - Neurospora crassa
Length = 878
Score = 35.9 bits (79), Expect = 1.1
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -3
Query: 679 GLKIVRQ-LQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLEHRRELPPQDIAQQRQ 503
G K RQ +Q K + FA +++N+S L +Q Q+ HR PP+D AQQ+
Sbjct: 421 GQKASRQKVQHLEKPSLIPFASSTALNHSMEAQRLPSQLQVCPPRHRIS-PPKDSAQQQN 479
Query: 502 PAV 494
P +
Sbjct: 480 PVL 482
>UniRef50_Q92355 Cluster: Helicase sen1; n=1; Schizosaccharomyces
pombe|Rep: Helicase sen1 - Schizosaccharomyces pombe
(Fission yeast)
Length = 1687
Score = 34.7 bits (76), Expect = 2.5
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = -3
Query: 733 LRLCKKDLAIKRN-KNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIA 557
L K++ KRN ++K K + + N+ + A + +N E+D+ ++ +
Sbjct: 808 LEQLKQEYLTKRNFESKLKSSAVSSRKPTFNEVKPANLLAEDLSDN---EDDIDRKQGLF 864
Query: 556 HLEHRRELPPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRL 392
L ++P +I QQ + V+ + +T+ MH I + N N N + L P +
Sbjct: 865 SLAKANKIP--EIRQQERRQVQLLSNSTIKMHPSQIRMMTNRNVANVKARLFPSM 917
>UniRef50_UPI00006CE925 Cluster: hypothetical protein TTHERM_00560060;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00560060 - Tetrahymena thermophila SB210
Length = 1960
Score = 33.5 bits (73), Expect = 5.8
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = -3
Query: 703 KRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPEND---LINQRQIAHLEHRREL 533
K+ +N N G V L+++N ++C+ +++ +P+N L + QI + + R +
Sbjct: 1462 KKEENTNNGFDNVVSLEKSNSKSNQRYSCNQNLDEESPDNSYYYLQDSPQIKNKQIRPTI 1521
Query: 532 PPQ-DIAQQRQPAVKKIKRNT 473
PQ ++ + Q + + +NT
Sbjct: 1522 VPQLNLQKSFQNTLTTLNQNT 1542
>UniRef50_Q8A869 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 271
Score = 33.5 bits (73), Expect = 5.8
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 476 VSLNFFYSWLSLLGNVLWRKFPSMFQMSNLPLINEIIFWSRIV 604
+SLN + L LLG++ W K + + +L +I + +WS +V
Sbjct: 180 ISLNLYVQSLFLLGSIFWSKNTFLKTLISLVVIGFVYYWSGVV 222
>UniRef50_A3VWY6 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. 217|Rep: Putative uncharacterized
protein - Roseovarius sp. 217
Length = 199
Score = 33.5 bits (73), Expect = 5.8
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = -3
Query: 727 LCKKDLAIKRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLE 548
+ D K + + + L +R +N++R A + D + E L ++R LE
Sbjct: 64 IAHNDRIAKELEAEEQSLTSLRATTPSNEFRALADSFDQKVE----ELRLESERMSRDLE 119
Query: 547 HRRELPPQDIAQQRQPAVKKIKRNTLSMHVLDISTVL 437
RR+L P + QP ++ + R +M ++D V+
Sbjct: 120 RRRDLVPVQFMRVVQPVLEDLLREAGAMVMIDARAVM 156
>UniRef50_A2DU00 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 779
Score = 33.5 bits (73), Expect = 5.8
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = -3
Query: 553 LEHRRELPPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEM--- 383
LEHR + +D+AQ+RQ +K+ ++NT+ M LN N N++ R+ ++
Sbjct: 331 LEHRVDNAIRDVAQERQRLIKRNQQNTIMM-TRSAPPELNNND-NFIELERARMAKLQHV 388
Query: 382 NGAPEELVMYSLVKGN 335
E V++SLV N
Sbjct: 389 RNKSVEQVIFSLVMMN 404
>UniRef50_Q967S7 Cluster: Retrovirus-related Gag polyprotein from
transposon HMS-Beagle; n=1; Drosophila melanogaster|Rep:
Retrovirus-related Gag polyprotein from transposon
HMS-Beagle - Drosophila melanogaster (Fruit fly)
Length = 467
Score = 33.5 bits (73), Expect = 5.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 312 PPNIISSPFPFTNEYITSSSGAPFISPSRGHNQ 410
PP + PFP +++++ APFI P + + Q
Sbjct: 319 PPQYLGQPFPAPRQHVSNFGNAPFIPPRQNYQQ 351
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,595,398
Number of Sequences: 1657284
Number of extensions: 12834579
Number of successful extensions: 31529
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31516
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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