Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c05r
         (759 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063864-1|AAH63864.1|  717|Homo sapiens F-box protein 42 protein.     37   0.069
BC043410-1|AAH43410.1|  716|Homo sapiens F-box protein 42 protein.     37   0.069
BC006174-1|AAH06174.1|  513|Homo sapiens FBXO42 protein protein.       37   0.069
AL833874-1|CAD38731.1|  366|Homo sapiens hypothetical protein pr...    37   0.069
AL358794-1|CAH73774.1|  717|Homo sapiens F-box protein 42 protein.     37   0.069
AL109627-1|CAI22560.1|  717|Homo sapiens F-box protein 42 protein.     37   0.069
AB037753-1|BAA92570.1|  651|Homo sapiens KIAA1332 protein protein.     37   0.069

>BC063864-1|AAH63864.1|  717|Homo sapiens F-box protein 42 protein.
          Length = 717

 Score = 37.1 bits (82), Expect = 0.069
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -3

Query: 532 PPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEMNGAPEELVMY 353
           PPQ +    +P  + +    + M+VLDI     +     V W       + G PE   ++
Sbjct: 625 PPQSL-NVGKPLYQSMNCKPMQMYVLDIKDTKEKGR---VKWKVFNSSSVVGPPETS-LH 679

Query: 352 SLVKGNGELIMFGGV 308
           ++V+G GELI+FGG+
Sbjct: 680 TVVQGRGELIIFGGL 694


>BC043410-1|AAH43410.1|  716|Homo sapiens F-box protein 42 protein.
          Length = 716

 Score = 37.1 bits (82), Expect = 0.069
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -3

Query: 532 PPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEMNGAPEELVMY 353
           PPQ +    +P  + +    + M+VLDI     +     V W       + G PE   ++
Sbjct: 624 PPQSL-NVGKPLYQSMNCKPMQMYVLDIKDTKEKGR---VKWKVFNSSSVVGPPETS-LH 678

Query: 352 SLVKGNGELIMFGGV 308
           ++V+G GELI+FGG+
Sbjct: 679 TVVQGRGELIIFGGL 693


>BC006174-1|AAH06174.1|  513|Homo sapiens FBXO42 protein protein.
          Length = 513

 Score = 37.1 bits (82), Expect = 0.069
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -3

Query: 532 PPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEMNGAPEELVMY 353
           PPQ +    +P  + +    + M+VLDI     +     V W       + G PE   ++
Sbjct: 421 PPQSL-NVGKPLYQSMNCKPMQMYVLDIKDTKEKGR---VKWKVFNSSSVVGPPETS-LH 475

Query: 352 SLVKGNGELIMFGGV 308
           ++V+G GELI+FGG+
Sbjct: 476 TVVQGRGELIIFGGL 490


>AL833874-1|CAD38731.1|  366|Homo sapiens hypothetical protein
           protein.
          Length = 366

 Score = 37.1 bits (82), Expect = 0.069
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -3

Query: 532 PPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEMNGAPEELVMY 353
           PPQ +    +P  + +    + M+VLDI     +     V W       + G PE   ++
Sbjct: 274 PPQSL-NVGKPLYQSMNCKPMQMYVLDIKDTKEKGR---VKWKVFNSSSVVGPPETS-LH 328

Query: 352 SLVKGNGELIMFGGV 308
           ++V+G GELI+FGG+
Sbjct: 329 TVVQGRGELIIFGGL 343


>AL358794-1|CAH73774.1|  717|Homo sapiens F-box protein 42 protein.
          Length = 717

 Score = 37.1 bits (82), Expect = 0.069
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -3

Query: 532 PPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEMNGAPEELVMY 353
           PPQ +    +P  + +    + M+VLDI     +     V W       + G PE   ++
Sbjct: 625 PPQSL-NVGKPLYQSMNCKPMQMYVLDIKDTKEKGR---VKWKVFNSSSVVGPPETS-LH 679

Query: 352 SLVKGNGELIMFGGV 308
           ++V+G GELI+FGG+
Sbjct: 680 TVVQGRGELIIFGGL 694


>AL109627-1|CAI22560.1|  717|Homo sapiens F-box protein 42 protein.
          Length = 717

 Score = 37.1 bits (82), Expect = 0.069
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -3

Query: 532 PPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEMNGAPEELVMY 353
           PPQ +    +P  + +    + M+VLDI     +     V W       + G PE   ++
Sbjct: 625 PPQSL-NVGKPLYQSMNCKPMQMYVLDIKDTKEKGR---VKWKVFNSSSVVGPPETS-LH 679

Query: 352 SLVKGNGELIMFGGV 308
           ++V+G GELI+FGG+
Sbjct: 680 TVVQGRGELIIFGGL 694


>AB037753-1|BAA92570.1|  651|Homo sapiens KIAA1332 protein protein.
          Length = 651

 Score = 37.1 bits (82), Expect = 0.069
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -3

Query: 532 PPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCPRLGEMNGAPEELVMY 353
           PPQ +    +P  + +    + M+VLDI     +     V W       + G PE   ++
Sbjct: 559 PPQSL-NVGKPLYQSMNCKPMQMYVLDIKDTKEKGR---VKWKVFNSSSVVGPPETS-LH 613

Query: 352 SLVKGNGELIMFGGV 308
           ++V+G GELI+FGG+
Sbjct: 614 TVVQGRGELIIFGGL 628


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,707,708
Number of Sequences: 237096
Number of extensions: 1948008
Number of successful extensions: 3137
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3137
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)