Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c05r
(759 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p pro... 75 1e-13
AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA... 75 1e-13
AF365402-1|AAK53387.1| 467|Drosophila melanogaster gag protein. 33 0.32
AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p pro... 31 1.7
AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic ... 31 1.7
AE014298-3122|AAF50827.3| 395|Drosophila melanogaster CG1391-PA... 31 1.7
AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB... 31 1.7
M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lo... 30 3.0
AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA... 30 3.9
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 29 6.9
AY052031-1|AAK93455.1| 509|Drosophila melanogaster LD47970p pro... 29 9.1
AE014297-2526|AAF55560.3| 642|Drosophila melanogaster CG31122-P... 29 9.1
AE014296-2162|AAF49898.1| 509|Drosophila melanogaster CG4069-PA... 29 9.1
>BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p
protein.
Length = 667
Score = 74.5 bits (175), Expect = 1e-13
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Frame = -3
Query: 721 KKDLAIKRNKNKNKGLKIVRQLQEANKYRMAAFACDS-SINNSAPENDLIN---QRQIAH 554
+++LA++ N+ + K +L E + +RMAAF + S + S N+ I ++ A
Sbjct: 498 QRNLALRCRDNEPRLPKRFDELYE-DPFRMAAFNVPTRSRSASRDHNERIRRMEEKMNAI 556
Query: 553 LEHRRELPPQ-DIAQQ--RQPAVKKIKRNTLSMHVLDISTVLN--ENTLNYVSWLCPRLG 389
RR P + Q R P+ K+++ N S+ V DIS +L+ E L +V + G
Sbjct: 557 RNSRRSAPAAAQVEPQPLRAPSPKRLRCNVQSLFVCDISGILDSSEPALEWVEY--KNFG 614
Query: 388 EMNGAPEELVMYSLVKGNGELIMFGGVHNDISILTFSEHQNMYSNSLHF 242
+ GAP+ L++ SL+ GNGELI+FGGVH + T ++ + SNS+HF
Sbjct: 615 VLKGAPDRLILSSLIAGNGELILFGGVHKE----TLTDITHHVSNSIHF 659
>AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA
protein.
Length = 667
Score = 74.5 bits (175), Expect = 1e-13
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Frame = -3
Query: 721 KKDLAIKRNKNKNKGLKIVRQLQEANKYRMAAFACDS-SINNSAPENDLIN---QRQIAH 554
+++LA++ N+ + K +L E + +RMAAF + S + S N+ I ++ A
Sbjct: 498 QRNLALRCRDNEPRLPKRFDELYE-DPFRMAAFNVPTRSRSASRDHNERIRRMEEKMNAI 556
Query: 553 LEHRRELPPQ-DIAQQ--RQPAVKKIKRNTLSMHVLDISTVLN--ENTLNYVSWLCPRLG 389
RR P + Q R P+ K+++ N S+ V DIS +L+ E L +V + G
Sbjct: 557 RNSRRSAPAAAQVEPQPLRAPSPKRLRCNVQSLFVCDISGILDSSEPALEWVEY--KNFG 614
Query: 388 EMNGAPEELVMYSLVKGNGELIMFGGVHNDISILTFSEHQNMYSNSLHF 242
+ GAP+ L++ SL+ GNGELI+FGGVH + T ++ + SNS+HF
Sbjct: 615 VLKGAPDRLILSSLIAGNGELILFGGVHKE----TLTDITHHVSNSIHF 659
>AF365402-1|AAK53387.1| 467|Drosophila melanogaster gag protein.
Length = 467
Score = 33.5 bits (73), Expect = 0.32
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 312 PPNIISSPFPFTNEYITSSSGAPFISPSRGHNQ 410
PP + PFP +++++ APFI P + + Q
Sbjct: 319 PPQYLGQPFPAPRQHVSNFGNAPFIPPRQNYQQ 351
>AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p
protein.
Length = 1593
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 703 KRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLEHRRELPPQ 524
+ N NKN+ K+VR+ KY S A + RQ+ +L + P
Sbjct: 314 QNNNNKNQNHKVVRESGAKRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQEP- 372
Query: 523 DIAQQRQPA-VKKIKRNT 473
QQ+ PA ++++R T
Sbjct: 373 ---QQKSPANPQQLQRKT 387
>AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic
lobes protein.
Length = 1597
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 703 KRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLEHRRELPPQ 524
+ N NKN+ K+VR+ KY S A + RQ+ +L + P
Sbjct: 314 QNNNNKNQNHKVVRESGAKRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQEP- 372
Query: 523 DIAQQRQPA-VKKIKRNT 473
QQ+ PA ++++R T
Sbjct: 373 ---QQKSPANPQQLQRKT 387
>AE014298-3122|AAF50827.3| 395|Drosophila melanogaster CG1391-PA,
isoform A protein.
Length = 395
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 703 KRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLEHRRELPPQ 524
+ N NKN+ K+VR+ KY S A + RQ+ +L + P
Sbjct: 314 QNNNNKNQNHKVVRESGAKRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQEP- 372
Query: 523 DIAQQRQPA-VKKIKRNT 473
QQ+ PA ++++R T
Sbjct: 373 ---QQKSPANPQQLQRKT 387
>AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB,
isoform B protein.
Length = 1594
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 703 KRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLEHRRELPPQ 524
+ N NKN+ K+VR+ KY S A + RQ+ +L + P
Sbjct: 314 QNNNNKNQNHKVVRESGAKRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQEP- 372
Query: 523 DIAQQRQPA-VKKIKRNT 473
QQ+ PA ++++R T
Sbjct: 373 ---QQKSPANPQQLQRKT 387
>M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lobes
protein protein.
Length = 1597
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = -3
Query: 703 KRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLEHRRELPPQ 524
+ N NKN+ K+VR+ KY S A + RQ+ +L + P
Sbjct: 314 QNNNNKNQNHKVVRESGAKRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQEP- 372
Query: 523 DIAQQRQPA 497
QQ+ PA
Sbjct: 373 ---QQKSPA 378
>AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA
protein.
Length = 1393
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = -3
Query: 730 RLCKKDLAIKRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHL 551
RL KK LA R KNK L ++R +KY M+ F + +I +S EN+ + ++ +
Sbjct: 1187 RLLKKKLA--RAKNKYLQLSVLRM----SKYLMSVFENNEAIESSEEENESLENVELEQI 1240
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 29.1 bits (62), Expect = 6.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -3
Query: 544 RRELPPQDIAQQRQPAVKKIKRNTLSMHVLDISTVLNENTLNYVSWLCP--RLGEMNGAP 371
R +LPP+D + A K+ L VL + L+EN+L + + R + +G+P
Sbjct: 1624 RVKLPPEDQPSTSRQARKQEAEGQLEQRVLALEKQLSENSLKLLEAMRERHRSADDSGSP 1683
Query: 370 EELVMYSLVKGNGELIMF 317
L ++ EL+ +
Sbjct: 1684 RRLSTETIDATGKELVRY 1701
>AY052031-1|AAK93455.1| 509|Drosophila melanogaster LD47970p
protein.
Length = 509
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 358 MYSLVKGNGELIMFGGVHNDISILTFSEHQNMYSNSL 248
M ++ GEL MFGG H S L F +++++ +L
Sbjct: 129 MVAVASNGGELWMFGGEHASPSQLQFHHYKDLWKFAL 165
>AE014297-2526|AAF55560.3| 642|Drosophila melanogaster CG31122-PA
protein.
Length = 642
Score = 28.7 bits (61), Expect = 9.1
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = -3
Query: 721 KKDLAIKRNKNKNKGLKIVRQLQEANKYRMAAFACDSSINNSAPENDLINQRQIAHLEHR 542
K+ + ++ + L +L A+ R+AA S++ SA L+N +H++ +
Sbjct: 528 KRQQVAQLRQHHQQLLAAAPELALASSSRLAAALISSAVALSASSASLVNSHHHSHMQQQ 587
Query: 541 RELPPQDIAQQRQPA 497
+ P PA
Sbjct: 588 QTQQPPQARHHHHPA 602
>AE014296-2162|AAF49898.1| 509|Drosophila melanogaster CG4069-PA
protein.
Length = 509
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 358 MYSLVKGNGELIMFGGVHNDISILTFSEHQNMYSNSL 248
M ++ GEL MFGG H S L F +++++ +L
Sbjct: 129 MVAVASNGGELWMFGGEHASPSQLQFHHYKDLWKFAL 165
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,303,698
Number of Sequences: 53049
Number of extensions: 607569
Number of successful extensions: 1623
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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