Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c05f
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    27   0.086
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.9  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 27.5 bits (58), Expect = 0.086
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -1

Query: 456 NRFVITGNIFVGERFFHKILNSPIAFTSF 370
           ++ +I+G+IF+    F++ILNS    T+F
Sbjct: 234 SKIIISGSIFMTTTSFYRILNSGYNLTTF 262


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 58  FCLLIAWLCIAIYHY 14
           +C+LI  LCI  ++Y
Sbjct: 229 YCVLIILLCIYYFYY 243


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 456 FHMQHVYLKIVCTYLGDAQL 515
           FH   +++KIV  +  +A L
Sbjct: 56  FHRNEIHIKIVLMFFKEASL 75


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 432 IFVGERFFHKILNSPIAFTSFIEV 361
           +F+  RF  KIL +   FTS +E+
Sbjct: 241 VFITGRFVIKILVALNFFTSTLEI 264


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 179 KTTNFCLVFTKLKLCS 132
           KT  FC + T L  CS
Sbjct: 402 KTKTFCTLVTALVYCS 417


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,558
Number of Sequences: 336
Number of extensions: 3700
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)