Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c05f
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 40 0.001
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 40 0.001
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 40 0.001
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 40 0.001
Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical p... 34 0.062
Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical p... 34 0.062
Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical pr... 34 0.062
Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical pr... 34 0.062
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 32 0.25
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 29 2.3
AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical... 29 2.3
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75547-5|CAA99899.1| 207|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81486-7|CAB03989.1| 480|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81558-5|CAB04542.2| 543|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81459-2|CAB03828.2| 543|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z78016-6|CAB01441.1| 336|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL023835-8|CAA19491.1| 483|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +2
Query: 404 LWKNLSPTNMFPVITKRFSHAACILENSMYIFGGCT-------TNSTSFNDLWKFDLSTR 562
+W + + P RF H +N +Y+FGG T T + N+LW FD+ ++
Sbjct: 329 IWSKVEVSGDMP--KPRFDHTVVKYKNKLYMFGGVTKTQVRHQTTQAATNELWIFDMGSK 386
Query: 563 KW 568
KW
Sbjct: 387 KW 388
Score = 30.7 bits (66), Expect = 0.77
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 485 SMYIFGGCTTNSTSFNDLWKFDLSTRKW 568
++ ++GG N+T + L +FD ST+KW
Sbjct: 471 AILVYGGSMWNNTITDSLMQFDTSTKKW 498
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 407 WKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFNDLW 541
W N+S PV KRF H+ ++ +Y GG N +D+W
Sbjct: 553 WSNMSTA---PVDLKRFGHSVHVIGQKLYALGG--FNGKMKSDVW 592
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +2
Query: 404 LWKNLSPTNMFPVITKRFSHAACILENSMYIFGGCT-------TNSTSFNDLWKFDLSTR 562
+W + + P RF H +N +Y+FGG T T + N+LW FD+ ++
Sbjct: 329 IWSKVEVSGDMP--KPRFDHTVVKYKNKLYMFGGVTKTQVRHQTTQAATNELWIFDMGSK 386
Query: 563 KW 568
KW
Sbjct: 387 KW 388
Score = 30.7 bits (66), Expect = 0.77
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 485 SMYIFGGCTTNSTSFNDLWKFDLSTRKW 568
++ ++GG N+T + L +FD ST+KW
Sbjct: 471 AILVYGGSMWNNTITDSLMQFDTSTKKW 498
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 407 WKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFNDLW 541
W N+S PV KRF H+ ++ +Y GG N +D+W
Sbjct: 553 WSNMSTA---PVDLKRFGHSVHVIGQKLYALGG--FNGKMKSDVW 592
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +2
Query: 404 LWKNLSPTNMFPVITKRFSHAACILENSMYIFGGCT-------TNSTSFNDLWKFDLSTR 562
+W + + P RF H +N +Y+FGG T T + N+LW FD+ ++
Sbjct: 329 IWSKVEVSGDMP--KPRFDHTVVKYKNKLYMFGGVTKTQVRHQTTQAATNELWIFDMGSK 386
Query: 563 KW 568
KW
Sbjct: 387 KW 388
Score = 30.7 bits (66), Expect = 0.77
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 485 SMYIFGGCTTNSTSFNDLWKFDLSTRKW 568
++ ++GG N+T + L +FD ST+KW
Sbjct: 471 AILVYGGSMWNNTITDSLMQFDTSTKKW 498
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 407 WKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFNDLW 541
W N+S PV KRF H+ ++ +Y GG N +D+W
Sbjct: 553 WSNMSTA---PVDLKRFGHSVHVIGQKLYALGG--FNGKMKSDVW 592
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 233 TIEDLPDEVLEFILSFLPPYRDLENCGGVCRRWYACAQNVL 355
TIE LPD+VL I +L P + + G VC+RW +QN L
Sbjct: 48 TIEKLPDKVLRDIFQYLSP-KQINQVGLVCKRWRVTSQNPL 87
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 233 TIEDLPDEVLEFILSFLPPYRDLENCGGVCRRWYACAQNVL 355
TIE LPD+VL I +L P + + G VC+RW +QN L
Sbjct: 31 TIEKLPDKVLRDIFQYLSP-KQINQVGLVCKRWRVTSQNPL 70
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 233 TIEDLPDEVLEFILSFLPPYRDLENCGGVCRRWYACAQNVL 355
TIE LPD+VL I +L P + + G VC+RW +QN L
Sbjct: 65 TIEKLPDKVLRDIFQYLSP-KQINQVGLVCKRWRVTSQNPL 104
>Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 34.3 bits (75), Expect = 0.062
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 404 LWKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFN-DLWKFDLSTRKW 568
+WK + P R H A + N M++FGG ++ F+ + + FD +T W
Sbjct: 130 VWKKVEIEGFVP--PSRDGHTAVVWNNQMFVFGGYEEDAQRFSQETYVFDFATSTW 183
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 452 RFSHAACILENSMYIFGG-CTTNSTSFNDLWKFDLSTRKW 568
R SH+ + + MY+FGG T + +N+L+ FD T W
Sbjct: 257 RRSHSTWVYDGKMYMFGGYLGTINVHYNELYCFDPKTSMW 296
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 407 WKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFNDL 538
W+ + N P R H A +++ MYIFGG + S F+ +
Sbjct: 183 WREMHTKNDPP--RWRDFHTASVIDGMMYIFGGRSDESGQFHTI 224
>Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 34.3 bits (75), Expect = 0.062
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 404 LWKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFN-DLWKFDLSTRKW 568
+WK + P R H A + N M++FGG ++ F+ + + FD +T W
Sbjct: 130 VWKKVEIEGFVP--PSRDGHTAVVWNNQMFVFGGYEEDAQRFSQETYVFDFATSTW 183
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 452 RFSHAACILENSMYIFGG-CTTNSTSFNDLWKFDLSTRKW 568
R SH+ + + MY+FGG T + +N+L+ FD T W
Sbjct: 263 RRSHSTWVYDGKMYMFGGYLGTINVHYNELYCFDPKTSMW 302
>Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 34.3 bits (75), Expect = 0.062
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 404 LWKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFN-DLWKFDLSTRKW 568
+WK + P R H A + N M++FGG ++ F+ + + FD +T W
Sbjct: 130 VWKKVEIEGFVP--PSRDGHTAVVWNNQMFVFGGYEEDAQRFSQETYVFDFATSTW 183
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 452 RFSHAACILENSMYIFGG-CTTNSTSFNDLWKFDLSTRKW 568
R SH+ + + MY+FGG T + +N+L+ FD T W
Sbjct: 257 RRSHSTWVYDGKMYMFGGYLGTINVHYNELYCFDPKTSMW 296
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 407 WKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFNDL 538
W+ + N P R H A +++ MYIFGG + S F+ +
Sbjct: 183 WREMHTKNDPP--RWRDFHTASVIDGMMYIFGGRSDESGQFHTI 224
>Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 34.3 bits (75), Expect = 0.062
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 404 LWKNLSPTNMFPVITKRFSHAACILENSMYIFGGCTTNSTSFN-DLWKFDLSTRKW 568
+WK + P R H A + N M++FGG ++ F+ + + FD +T W
Sbjct: 130 VWKKVEIEGFVP--PSRDGHTAVVWNNQMFVFGGYEEDAQRFSQETYVFDFATSTW 183
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 452 RFSHAACILENSMYIFGG-CTTNSTSFNDLWKFDLSTRKW 568
R SH+ + + MY+FGG T + +N+L+ FD T W
Sbjct: 263 RRSHSTWVYDGKMYMFGGYLGTINVHYNELYCFDPKTSMW 302
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Frame = +2
Query: 440 VITKRFSHAACILE--NSMYIFGGCT------TNSTSFNDLWKFDLSTRKW 568
++++R + A E S+Y+FGG T FNDLW+ D +T KW
Sbjct: 132 IMSERQNACATYFEPTRSLYLFGGEAIDGDEHTPGAVFNDLWRLDTATLKW 182
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 444 ITGNIFVGERFFHKILNSPIAFTSFIEVLCRTFWAHAYH 328
+T NIF F SPI F +F L + +W YH
Sbjct: 218 LTYNIFQQAELFRIFKVSPIKFFNFFHALEKGYWEIPYH 256
>Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 444 ITGNIFVGERFFHKILNSPIAFTSFIEVLCRTFWAHAYH 328
+T NIF F SPI F +F L + +W YH
Sbjct: 97 LTYNIFQQAELFRIFKVSPIKFFNFFHALEKGYWEIPYH 135
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 444 ITGNIFVGERFFHKILNSPIAFTSFIEVLCRTFWAHAYH 328
+T NIF F SPI F +F L + +W YH
Sbjct: 218 LTYNIFQQAELFRIFKVSPIKFFNFFHALEKGYWEIPYH 256
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 444 ITGNIFVGERFFHKILNSPIAFTSFIEVLCRTFWAHAYH 328
+T NIF F SPI F +F L + +W YH
Sbjct: 218 LTYNIFQQAELFRIFKVSPIKFFNFFHALEKGYWEIPYH 256
>AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 444 ITGNIFVGERFFHKILNSPIAFTSFIEVLCRTFWAHAYH 328
+T NIF F SPI F +F L + +W YH
Sbjct: 97 LTYNIFQQAELFRIFKVSPIKFFNFFHALEKGYWEIPYH 135
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 334 CVCPKCSTQNLYKTCKSNW 390
CVCP C+ + KSNW
Sbjct: 425 CVCPNCNISTCLECLKSNW 443
>Z75547-5|CAA99899.1| 207|Caenorhabditis elegans Hypothetical
protein R11D1.4 protein.
Length = 207
Score = 28.3 bits (60), Expect = 4.1
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Frame = +2
Query: 161 NKSL*FFVKMEIIHKSLQEQTLRSTIEDLPDEVLEFILSFLPPYR-DLENC-GGVCRRWY 334
NK+L I+ L +TL S +EDL +L + L R L NC +
Sbjct: 88 NKALQAIALYNNINNCLSPETLDSVLEDLQPAILANLAGLLQKLRTSLINCKASGDAKLE 147
Query: 335 ACAQNVLHKTSIKLV-KAIGEF--KILWKNLSP 424
CAQ V +L K + F KI+ +N +P
Sbjct: 148 TCAQKVYGLILTELTFKYVDNFCIKIVTENATP 180
>Z81486-7|CAB03989.1| 480|Caenorhabditis elegans Hypothetical
protein C53A5.9 protein.
Length = 480
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +2
Query: 452 RFSHAACILENSMYIFGGCTTNSTSFNDLWKFDLSTRKW 568
R AC+ + +YI GG + + + +D T+ W
Sbjct: 365 RSGFGACVFQGRIYIAGGWSNTRNTLKSVRSYDPYTKTW 403
>Z81558-5|CAB04542.2| 543|Caenorhabditis elegans Hypothetical
protein F59D12.4 protein.
Length = 543
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 176 FFVKMEIIHKSLQEQTLRSTIEDLPDEVLEFILSFLPPYRDLENCGGVC 322
FF K++ S E ++++ +E DE+ + + S P+ + N VC
Sbjct: 118 FFKKIKGFSVSFAETSMKTIVELFFDELFQVMFSIANPFYSITNDQRVC 166
>Z81459-2|CAB03828.2| 543|Caenorhabditis elegans Hypothetical
protein F59D12.4 protein.
Length = 543
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 176 FFVKMEIIHKSLQEQTLRSTIEDLPDEVLEFILSFLPPYRDLENCGGVC 322
FF K++ S E ++++ +E DE+ + + S P+ + N VC
Sbjct: 118 FFKKIKGFSVSFAETSMKTIVELFFDELFQVMFSIANPFYSITNDQRVC 166
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 156 VHKIETMFRVLGKPMIMTLMVYSISVISIEICVFVCL 46
+ KI +FR + L +Y +SV +I I V VCL
Sbjct: 53 ISKISDIFRFYYRRFRRILPLYYLSVAAITIAVHVCL 89
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 156 VHKIETMFRVLGKPMIMTLMVYSISVISIEICVFVCL 46
+ KI +FR + L +Y +SV +I I V VCL
Sbjct: 53 ISKISDIFRFYYRRFRRILPLYYLSVAAITIAVHVCL 89
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +2
Query: 452 RFSHAACILENSMYIFGGCTTNSTSFNDLWKFDLSTRKW 568
R +C +YI GG + +S + + +D T+ W
Sbjct: 461 RAGFGSCAFRGRIYIAGGWSNSSNTLRSVRSYDPLTKSW 499
>Z78016-6|CAB01441.1| 336|Caenorhabditis elegans Hypothetical
protein R186.2a protein.
Length = 336
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -1
Query: 186 LTKNYKLLFGVHKIETMFRVLGKPMIMTLMVYSISVISIEICVFVCLL 43
++ Y L F HK+ + + G ++ +L ++ I + C FV +L
Sbjct: 118 ISLTYTLYFKYHKLNSKGPLFGWKLVRSLFLFYIPCLVSMCCAFVVVL 165
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 105 TLMVYSISVISIEICVFVCLLHGFALQF 22
T++ Y++ VI+ + VFV +LH F F
Sbjct: 478 TIIYYNLDVIAFVLFVFVAVLHVFIYAF 505
>AL023835-8|CAA19491.1| 483|Caenorhabditis elegans Hypothetical
protein Y37A1B.8 protein.
Length = 483
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 147 FCEHQTKVCSFLLKWKSFINLYKNRLCEVQLKTFLMKYWSLF*VFCLPTE 296
FC ++ FL+K+ SF+N++ N +C + F+ K LF +FC T+
Sbjct: 306 FCLTFEEIMFFLVKYISFLNIHAN-ICNTK---FIPK---LFDIFCNSTK 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,461,581
Number of Sequences: 27780
Number of extensions: 323392
Number of successful extensions: 921
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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