Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c04r
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.8  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    25   3.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.5  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   9.5  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 429  VTFNLLRPTTFSIDLALPKLSASAVAVNGQATIFGRELAVASSGS 295
            + FNL     + + + L  LSAS   + G    FG     ASSGS
Sbjct: 2777 IPFNLTASIAYFVGMGL-SLSASIGVMIGSGITFGYFALAASSGS 2820


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +1

Query: 328 KDGGL-TVDGDSRGAEFGEGKVDAECSWSQKVE 423
           K GG  T   DS G    EGK+    SWS + E
Sbjct: 217 KQGGTGTCRNDSGGPFVAEGKLIGVVSWSHECE 249


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 360 AVAVNGQATIFGRELAVASSGSLVVED 280
           AVA +    +FGRE  V +S SL+  D
Sbjct: 272 AVAQSMSLAVFGRERKVWNSASLIDVD 298


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -2

Query: 634 QRKPEFDRKTDREHHQPHHFWYPRTWT*PNLRRKSRRRLHFPN 506
           +RK  +   TD ++++PH F    T     LRR++      PN
Sbjct: 135 ERKVAYGEGTDDDYNRPHLFVSLATTQVRRLRRRALDCTGAPN 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,523
Number of Sequences: 2352
Number of extensions: 12071
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)