Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c04f
(594 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4X2H0 Cluster: Putative uncharacterized protein; n=6; ... 40 0.058
UniRef50_O46598 Cluster: Hepatitis A virus cellular receptor 1 l... 39 0.077
UniRef50_A3ZT85 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_A5UK04 Cluster: UDP-glucose 4-epimerase; n=2; Euryarcha... 38 0.23
UniRef50_Q93QI5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q56954 Cluster: Chelated iron transport system membrane... 36 0.54
UniRef50_Q0CK80 Cluster: Predicted protein; n=1; Aspergillus ter... 36 0.72
UniRef50_Q5JHX8 Cluster: ABC-type dipeptide/oligopeptide transpo... 36 0.72
UniRef50_Q5YNH7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.95
UniRef50_Q54J46 Cluster: Putative uncharacterized protein; n=2; ... 36 0.95
UniRef50_A4C651 Cluster: Putative polysaccharide biosynthesis pr... 34 2.2
UniRef50_Q4J0S1 Cluster: Putative uncharacterized protein precur... 34 2.9
UniRef50_Q16GG0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q66659 Cluster: ORF 57; n=1; Equid herpesvirus 2|Rep: O... 33 3.8
UniRef50_Q3KGA0 Cluster: VCBS; n=1; Pseudomonas fluorescens PfO-... 33 3.8
UniRef50_Q5C1B9 Cluster: SJCHGC07875 protein; n=1; Schistosoma j... 33 3.8
UniRef50_A4HH13 Cluster: Putative uncharacterized protein; n=3; ... 33 3.8
UniRef50_Q18TE7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q7Y1C6 Cluster: PgPOR29; n=6; Poaceae|Rep: PgPOR29 - Pe... 33 5.0
UniRef50_Q86WI1 Cluster: Fibrocystin L; n=32; Euteleostomi|Rep: ... 33 5.0
UniRef50_P13065 Cluster: Periplasmic [NiFeSe] hydrogenase large ... 33 5.0
UniRef50_Q76DN6 Cluster: Fiber protein; n=2; Human adenovirus C|... 33 6.7
UniRef50_A6GFA4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A6GAL4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q25402 Cluster: Microfilarial sheath protein SHP3; n=1;... 33 6.7
UniRef50_A7TJ27 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_P18048 Cluster: Fiber protein 2; n=4; Human adenovirus ... 33 6.7
UniRef50_UPI0000F2B42A Cluster: PREDICTED: similar to T-cell imm... 32 8.8
UniRef50_Q997H2 Cluster: Fiber; n=1; Bovine adenovirus 4|Rep: Fi... 32 8.8
UniRef50_Q3VZF1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
UniRef50_Q9LPE7 Cluster: T12C22.11 protein; n=2; Arabidopsis tha... 32 8.8
UniRef50_A0BS33 Cluster: Chromosome undetermined scaffold_124, w... 32 8.8
>UniRef50_Q4X2H0 Cluster: Putative uncharacterized protein; n=6;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1666
Score = 39.5 bits (88), Expect = 0.058
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 202 VDWVKSTFLDTRSDA--VDGVHDQFFDQILAFSVKVNF*GHSNDAGSESNKNKCEGLHCR 29
++++K+ F R DA +H FFD I S+K N H N N N + CR
Sbjct: 1178 INFIKTEF-KKRHDANIFSNIHYYFFDNIYTNSIKENINKHYNKIIKNGNNNNIKNRDCR 1236
Query: 28 FFSHQINL 5
++ +INL
Sbjct: 1237 YYIFRINL 1244
>UniRef50_O46598 Cluster: Hepatitis A virus cellular receptor 1 long
form; n=12; Eutheria|Rep: Hepatitis A virus cellular
receptor 1 long form - Cercopithecus aethiops (Green
monkey) (Grivet)
Length = 478
Score = 39.1 bits (87), Expect = 0.077
Identities = 30/112 (26%), Positives = 45/112 (40%)
Frame = -1
Query: 579 PKRTTLRADSTLPTVRTALSSLTLMLGSNRKLTVETRRISSTTRLPLLATANSLPKMVA* 400
P TTL +TLPT T + TL T+ T ++TT L T +LP +
Sbjct: 175 PTTTTLPMTTTLPTTTTVPMTTTLPTTLPTTTTLPTTLPTTTTLPTTLPTTTTLPTTMTL 234
Query: 399 PLTATAEALSLGRARSMLNVVGLKRLKVTSLTTTLLMPSRANSATVPDALKM 244
P+T T + + L T TTTL + + T+P + +
Sbjct: 235 PMTTTLPTTTTLPTTTTLPTTTTLPTTTTLPTTTLPTMTLPTTTTLPTTMTL 286
Score = 33.1 bits (72), Expect = 5.0
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = -1
Query: 588 TSXPKRTTLRADSTLPTVRTALSSLTLMLGSNRKLTVETRRISSTTRLP-LLATANSLPK 412
T+ P TTL +TLPT T ++ TL + + T + TT LP L T +LP
Sbjct: 154 TTLPTTTTLPTTTTLPTTMTLPTTTTLPMTTTLPTTT---TVPMTTTLPTTLPTTTTLPT 210
Query: 411 MVA*PLTATAEALSLGRARSMLNVVGLKRLKVTSLTTTLLMPSRANSAT 265
+ P T T +L ++ + L T+L TT +P+ T
Sbjct: 211 TL--PTTTTLPT-TLPTTTTLPTTMTLP--MTTTLPTTTTLPTTTTLPT 254
Score = 32.3 bits (70), Expect = 8.8
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 588 TSXPKRTTLRADSTLPTVRTALSSLTLMLGSNRKLTV-ETRRISSTTRLPL---LATANS 421
T+ P TTL +TLPT T ++ TL + +T+ T + +T LP+ L T +
Sbjct: 238 TTLPTTTTLPTTTTLPTTTTLPTTTTLPTTTLPTMTLPTTTTLPTTMTLPMTTTLPTTTT 297
Query: 420 LPKMVA*PLT 391
LP P T
Sbjct: 298 LPTTTTLPTT 307
>UniRef50_A3ZT85 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 162
Score = 37.9 bits (84), Expect = 0.18
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Frame = +2
Query: 125 LIEKLIVNTINRITSGIQERGLD---PIYVEKAEGDYTFPISDIFSAS--GTVAELALEG 289
LI K+ V+ R+ SG+Q L P+ + + F F A+ VAE A E
Sbjct: 4 LIPKM-VSIRKRLRSGVQTLELVIAFPLLLIASLAIVQFATLSAFQATVEAAVAEAAREA 62
Query: 290 ISNVVVND------VTFNLLRPTTFSIDLALPKLSASAVAVNGQATIFGRELAVASSGSL 451
+ D VTFN I + P++ A A+ + G T++G + GS+
Sbjct: 63 AKTIDPLDAPQTALVTFNRAMQL-HGITTSTPEI-ALAIDLVGSHTVYGDSAITLAPGSV 120
Query: 452 VVEDIRLVSTVSLRLLPSINV 514
+ ++R+ + VSLR P++N+
Sbjct: 121 IGNEVRVTAAVSLRAAPTLNL 141
>UniRef50_A5UK04 Cluster: UDP-glucose 4-epimerase; n=2;
Euryarchaeota|Rep: UDP-glucose 4-epimerase -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 309
Score = 37.5 bits (83), Expect = 0.23
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 131 EKLIVNTINRITSGIQERGLDPIYVEKAEGDYTFPISDI 247
EKL VN + I + E L+P+YV+K +GD I+DI
Sbjct: 242 EKLTVNRLYEIIADSMESDLEPVYVDKRKGDIEHSIADI 280
>UniRef50_Q93QI5 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus equi|Rep: Putative uncharacterized protein -
Corynebacterium equii (Rhodococcus equi)
Length = 165
Score = 37.1 bits (82), Expect = 0.31
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = -1
Query: 459 STTRLPLLATANSLPKMVA*PLTATAEALSLGRARSMLNVVGLKRLKVTSLTTTLLMPSR 280
STTR+P+ + +MV LT A AL LG R+ L+VVG R K L +L+PSR
Sbjct: 57 STTRVPVSVGSRVYDQMVRFSLTRNAMAL-LGSKRTTLDVVGHTR-KPLRLMLNVLVPSR 114
Query: 279 ANSAT 265
+ T
Sbjct: 115 TSPDT 119
>UniRef50_Q56954 Cluster: Chelated iron transport system membrane
protein yfeC; n=88; Proteobacteria|Rep: Chelated iron
transport system membrane protein yfeC - Yersinia pestis
Length = 294
Score = 36.3 bits (80), Expect = 0.54
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +2
Query: 230 FPISDIFSASGTVAELALEGISNV--VVNDVTFNLLRPTTFSIDLALPKLSASAVAVNGQ 403
FP + +G +A LA+ + ++ + D + T F++ L + +S + +VN Q
Sbjct: 63 FPYAAGAFFTGMLAALAMTLVRHITRLREDAIIGFIFSTFFAVGLLI--VSLNPTSVNVQ 120
Query: 404 ATIFGRELAVASSGSLVVEDIRLVSTVSLRLL 499
+ IFG L +A L VE I LVS V L L+
Sbjct: 121 SIIFGNILGIADEDVLQVEIIILVSFVILCLI 152
>UniRef50_Q0CK80 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 491
Score = 35.9 bits (79), Expect = 0.72
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +2
Query: 227 TFPISDIFSASGTVAELALEGISNVVVNDVTFNLLRPTTFSIDLALPKLSASAVAVNGQA 406
T P+SD+ SA+ T A++ +E + + V+ VT L+ +DLAL L A+A ++ A
Sbjct: 23 TVPVSDL-SATDTPADIPVEWLPSAQVSAVTTRLV-----GLDLALNDLEANATSLEQSA 76
Query: 407 TIFGRE 424
T+ E
Sbjct: 77 TVISAE 82
>UniRef50_Q5JHX8 Cluster: ABC-type dipeptide/oligopeptide transport
system, permease component; n=1; Thermococcus
kodakarensis KOD1|Rep: ABC-type dipeptide/oligopeptide
transport system, permease component - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 394
Score = 35.9 bits (79), Expect = 0.72
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +2
Query: 293 SNVVVNDVTFNLLRPTTFSIDLALPKLSASAVAVNGQATIFGRELAVASSGSLVVED--- 463
+N+V+++ T ++RP SI L+ S V + Q FGREL + GS+V+ +
Sbjct: 76 TNLVLSNATLLIIRPDGLSIRLSGTGSVNSNVTLAAQVKAFGRELGL-DEGSIVLHEPAQ 134
Query: 464 IRLVSTVSLRLLPSINVR-ELSAVLTVGNVESALKVVLFGXDV 589
I +S L+ +R E V+ GN L +G D+
Sbjct: 135 ILFLSGDGTLLMGDYTIRVESGEVVLFGNAYGLLGTDGYGRDL 177
>UniRef50_Q5YNH7 Cluster: Putative uncharacterized protein; n=1;
Nocardia farcinica|Rep: Putative uncharacterized protein
- Nocardia farcinica
Length = 1151
Score = 35.5 bits (78), Expect = 0.95
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = -3
Query: 511 VDAR*QS*ADSGDQTNIFDDKASTTGYSQFPAKDGGLTVDGDSRGAEFG--EGKVDAECS 338
VD QS AD+ D T + + +G P DG D+RG +G VDAE
Sbjct: 949 VDRAFQSGADASDDTEARAEPGAQSGTEVHPGVDGAFEFGADARGEVDARVDGGVDAEVD 1008
Query: 337 WSQKVESDVIDDNVADALESQFG 269
+ + E D A+ +ES+ G
Sbjct: 1009 VTAQAEVDAAPGPGAE-IESEIG 1030
>UniRef50_Q54J46 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1401
Score = 35.5 bits (78), Expect = 0.95
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +2
Query: 284 EGISNVVVNDV--TFNLLRPTTFSIDLALPKLSASAVAVNGQATIFGRELA-VASSGSLV 454
+G S++ + D T+ LL PT S L SA G+ TIFGREL+ +A+S +
Sbjct: 919 QGYSSLDLRDANFTYTLLTPTFSSYPKMTSYLPISANG--GELTIFGRELSTIANSFYRI 976
Query: 455 VEDIRLVSTVSLRLLPSINVRELSAVLTVGNVES 556
+ + S+ S + +INV+ +S V NV S
Sbjct: 977 IYSVN--SSNSTPVASNINVKYISNVAIKLNVSS 1008
>UniRef50_A4C651 Cluster: Putative polysaccharide biosynthesis
protein; n=1; Pseudoalteromonas tunicata D2|Rep:
Putative polysaccharide biosynthesis protein -
Pseudoalteromonas tunicata D2
Length = 507
Score = 34.3 bits (75), Expect = 2.2
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +2
Query: 233 PISDIFSASGTVAELALEGISNVVVNDVTFNLLRPTTFSIDLALPKLSASAVAVNGQATI 412
P S I S +A + +S++VV + LL PT D L ++ + + A+
Sbjct: 6 PHSVIKGISWNGLRVAFQAVSSIVVMAILARLLPPT----DFGLMAIAILVIGLGDLASS 61
Query: 413 FGRELAVASSGSLVVEDIRLVSTVSL 490
G A+ L +EDI++ T+S+
Sbjct: 62 LGMGPAIVQKKDLSLEDIQIAHTISV 87
>UniRef50_Q4J0S1 Cluster: Putative uncharacterized protein
precursor; n=1; Azotobacter vinelandii AvOP|Rep:
Putative uncharacterized protein precursor - Azotobacter
vinelandii AvOP
Length = 252
Score = 33.9 bits (74), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -3
Query: 208 FDVDWVKSTFLDTRSDAVDGVHDQFFDQILAFSVKVNF*GHSNDAGSESN 59
FDV W+K ++ D D + +F+ + A+ KV +S+D S++N
Sbjct: 108 FDVGWLKYDYVKDHLDNADLNYSEFYGSLSAYGFKVGI-NYSDDVNSDNN 156
>UniRef50_Q16GG0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 855
Score = 33.9 bits (74), Expect = 2.9
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -1
Query: 588 TSXPKRTTLRADSTLPTVRTALSSLTLMLGSNRKLTVETRRISSTTRLPLLATANS 421
T+ RTT RA +T T R ++ + R++T TRR ++TTR P T S
Sbjct: 518 TTSTTRTTTRAPTT--TTRRTTTTTRRPTTTTRRITTTTRRPTTTTRRPTTTTRRS 571
Score = 32.7 bits (71), Expect = 6.7
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 588 TSXPKRTTLR--ADSTLPTVRTALSSLTLMLGSNRKLTVETRRISSTTRLPLLAT 430
T+ P+ TT R +T T R ++ + R+ T TRRI++TTR P T
Sbjct: 507 TTRPQTTTTRRTTSTTRTTTRAPTTTTRRTTTTTRRPTTTTRRITTTTRRPTTTT 561
>UniRef50_Q66659 Cluster: ORF 57; n=1; Equid herpesvirus 2|Rep: ORF
57 - Equid herpesvirus 2 (Equine herpesvirus 2)
Length = 623
Score = 33.5 bits (73), Expect = 3.8
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 178 RTWT*PNLRRKSRRRLHFPNF*HLQRI-WHSSRIG 279
+TWT PNLRR+ RRR H P+ ++ + W SR G
Sbjct: 3 QTWTSPNLRRRKRRRNHPPSQSPMRILTWRWSRPG 37
>UniRef50_Q3KGA0 Cluster: VCBS; n=1; Pseudomonas fluorescens
PfO-1|Rep: VCBS - Pseudomonas fluorescens (strain PfO-1)
Length = 2887
Score = 33.5 bits (73), Expect = 3.8
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2
Query: 101 DLDRESQNLIEKLIVNTINRITSGIQERGLDPIYVEKAEGDYTFPISDIFSASGTVAELA 280
D D + NL+ ++ N + +G+ G + EK GD + P S + SGT A
Sbjct: 424 DGDTSTANLVLQIHNNDDPVVINGLNVEGGELTVYEKNLGDGSAPDSGALTQSGTFTITA 483
Query: 281 LEGISNVVVNDV 316
L+G++ + + +
Sbjct: 484 LDGVTTLTIGGI 495
>UniRef50_Q5C1B9 Cluster: SJCHGC07875 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07875 protein - Schistosoma
japonicum (Blood fluke)
Length = 178
Score = 33.5 bits (73), Expect = 3.8
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = -3
Query: 367 GEGKVDAECSWSQKVESDVIDDNVADALESQFGYCARCAEDVRNWESVIAFGFFDVDWVK 188
G GK+ CS S K + I ++ Q YC +ED+R W F +VD +
Sbjct: 73 GFGKIFTSCSSSLKNAKEDIHKDIISHFILQVAYCR--SEDLRRW-----FVQQEVDLFR 125
Query: 187 STFLDTRSDAVDG 149
FL+ R+++V G
Sbjct: 126 FRFLNERNNSVSG 138
>UniRef50_A4HH13 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 672
Score = 33.5 bits (73), Expect = 3.8
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = -3
Query: 385 SRGAEFGEGKVDAECSWSQKVESDVIDDNVADALESQFGYCARCAEDVRNWESVIAFGFF 206
SRG+ G+G VD + S V DV+ + + AL+ + G E V W+ + G
Sbjct: 391 SRGSA-GDGLVDVDAKNSTTVRGDVVASHFSRALDQKLGEAE--DEGVLRWDPLRESGQL 447
Query: 205 DVDWVKSTFLDTR 167
+ W+ T D +
Sbjct: 448 PLAWLPGTGTDAK 460
>UniRef50_Q18TE7 Cluster: Putative uncharacterized protein; n=1;
Desulfitobacterium hafniense DCB-2|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain DCB-2)
Length = 79
Score = 33.1 bits (72), Expect = 5.0
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 290 ISNVVVNDVTFNLLRPTTFSIDLALPKLSASAVAVN-GQATIFGRELAVASSGSLVVE-D 463
I N + +TFN TF+I L P+ S + T+ + + +A SG LV + D
Sbjct: 3 IMNKTILRMTFNTAGNKTFAISLDEPRPDVSKGEIEAAMETVIEKNIFLAPSGELVSKRD 62
Query: 464 IRLVSTVS 487
IR+V T +
Sbjct: 63 IRIVGTTT 70
>UniRef50_Q7Y1C6 Cluster: PgPOR29; n=6; Poaceae|Rep: PgPOR29 -
Pennisetum americanum (Pearl millet)
Length = 277
Score = 33.1 bits (72), Expect = 5.0
Identities = 23/89 (25%), Positives = 44/89 (49%)
Frame = +2
Query: 131 EKLIVNTINRITSGIQERGLDPIYVEKAEGDYTFPISDIFSASGTVAELALEGISNVVVN 310
+KL V+T++ +SG+ GL V+K G YT +S ++ TV ++ ++ SN+
Sbjct: 28 QKLTVSTVS--SSGV---GLTSTAVKKG-GLYTLDVSSVYKYKNTVVDIKVDTESNISTT 81
Query: 311 DVTFNLLRPTTFSIDLALPKLSASAVAVN 397
+ L T + LP ++ V ++
Sbjct: 82 LTVLDALPSTKLVTSVKLPDYNSGKVELH 110
>UniRef50_Q86WI1 Cluster: Fibrocystin L; n=32; Euteleostomi|Rep:
Fibrocystin L - Homo sapiens (Human)
Length = 4243
Score = 33.1 bits (72), Expect = 5.0
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 203 VEKAEGDYTFPISDIFSASGTVAELALEGISNVVVNDVTFNLLRPTTFSIDLALPKLSAS 382
+++ DYT + +I S +GT AE A E +S V D++ + P T+++ L P + +
Sbjct: 2040 IDRLRSDYTTLLCEIPSNNGTGAEQACE-VSVVNGKDLS-QSMTPFTYAVSLT-PLI--T 2094
Query: 383 AVAVNGQATIFGRELAVASSG-SLVVEDIRL 472
AV+ +T G L V SG S +ED+ +
Sbjct: 2095 AVSPKRGSTAGGTRLTVVGSGFSENMEDVHI 2125
>UniRef50_P13065 Cluster: Periplasmic [NiFeSe] hydrogenase large
subunit; n=5; Desulfovibrionales|Rep: Periplasmic
[NiFeSe] hydrogenase large subunit - Desulfovibrio
baculatus (Desulfomicrobium baculatus)
Length = 514
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3
Query: 235 WESVIAFGFFDVDWVKSTFLDTRSDAVDGVHDQFFDQILAFSVKVNF*GHSNDAG 71
W++VIAFG F D TFL +DG ++F +++ V +F HS G
Sbjct: 246 WKNVIAFGVFPEDDDYKTFLLKPGVYIDGKDEEFDSKLVKEYVGHSFFDHSAPGG 300
>UniRef50_Q76DN6 Cluster: Fiber protein; n=2; Human adenovirus
C|Rep: Fiber protein - Human adenovirus 6 (HAdV-6)
Length = 528
Score = 32.7 bits (71), Expect = 6.7
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1
Query: 591 DTSXPKRTTLRADSTLPTVRTALSSLTLMLGSNRKLTVETRRISSTTRLPLLATANSLPK 412
+TS P + A + T +S TL + S LTV+ ++S T+ PL L
Sbjct: 99 ETSAPLTVSSGALTMATTSPLVVSDNTLTMQSQAPLTVQDSKLSIATKEPLTVLDGKLAL 158
Query: 411 MVA*PLTAT 385
+ PL+AT
Sbjct: 159 QTSAPLSAT 167
>UniRef50_A6GFA4 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 318
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +2
Query: 203 VEKAEGDYTFPISDIFSASGTVAELALEGISNVVVNDVTFNLLRPTTFSIDLALPKLSAS 382
+++ +GDY P+S++F+A+ +A+ + F L D+ + +A
Sbjct: 161 LQRTKGDYALPVSELFAAAEPEVRVAMVNSMRRAEGEHAFATLAQGLADADVGVRIAAAD 220
Query: 383 AVAVNGQATIFGRELAVASSGS 448
+A++ G EL A S
Sbjct: 221 TLAMHEGGATLGDELIAALGDS 242
>UniRef50_A6GAL4 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 272
Score = 32.7 bits (71), Expect = 6.7
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -3
Query: 484 DSGDQTNIFD-----DKASTTGYSQFPAKDGGLTVDGDSRGAEFGE--GKVDAECSWSQK 326
D+G+ TN D D+AST G D G + D G E G + C+
Sbjct: 36 DAGETTNASDSDDGADEASTDGAEDASTTDDGSFIQEDGPGEESSSTPGNLGDPCA---- 91
Query: 325 VESDVIDDNVADALESQFGYCARCAED 245
+S +D V +A+ G C+ C+ D
Sbjct: 92 DDSQCAEDLVCNAIPMIGGICSECSSD 118
>UniRef50_Q25402 Cluster: Microfilarial sheath protein SHP3; n=1;
Litomosoides sigmodontis|Rep: Microfilarial sheath
protein SHP3 - Litomosoides sigmodontis (Filarial
nematode worm)
Length = 354
Score = 32.7 bits (71), Expect = 6.7
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 1/138 (0%)
Frame = -1
Query: 594 SDTSXPKRTTLRADSTLPTVRTALSSLTLMLGSNRKLTVETR-RISSTTRLPLLATANSL 418
+ T+ +TT + T TV+T+ ++ T + T T + SSTT+ +T +S
Sbjct: 39 TSTTTTAKTTSKTTKTT-TVKTSTTTKTTTSSTTSSTTKPTTSKTSSTTKTTTASTTSST 97
Query: 417 PKMVA*PLTATAEALSLGRARSMLNVVGLKRLKVTSLTTTLLMPSRANSATVPDALKMSE 238
K P T+ + + S + TS TT S +S T P K S
Sbjct: 98 TK----PTTSKTSSTTKTTTASTTSSTTKPTTSKTSSTTKTTTASTTSSTTKPTTSKTSS 153
Query: 237 IGKV*SPSAFST*IGSSP 184
K + T S+P
Sbjct: 154 TTKSSTSKTSGTTKSSTP 171
>UniRef50_A7TJ27 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1310
Score = 32.7 bits (71), Expect = 6.7
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = -1
Query: 564 LRADSTLPTVRTALSSLTLMLGSNRKLTVETRRISSTTRLPLLATANSLPKMVA*PLTAT 385
L +T ++ T S+T LG N+K+T + +STT P L + S + + T
Sbjct: 212 LNIGATPSSLTTMPESITASLGKNKKITESLQPSNSTTSAPKLDSRRSSSVVPTANIRPT 271
Query: 384 AEALSLGRARSMLNV 340
+ + + + S LN+
Sbjct: 272 SNSSLINKLNSRLNL 286
>UniRef50_P18048 Cluster: Fiber protein 2; n=4; Human adenovirus
F|Rep: Fiber protein 2 - Human adenovirus 40 (HAdV-40)
Length = 387
Score = 32.7 bits (71), Expect = 6.7
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = -1
Query: 588 TSXPKRTTLRADSTLPTVRTALSSLTLMLGSNRKLTVETRRISSTTRLPLLATANSLPKM 409
T+ TL+ S + T++ L S T+ S LT + T P+ +ANSL
Sbjct: 55 TNAKHELTLKLGSNI-TLQNGLLSATVPTVSP-PLTNSNNSLGLATSAPIAVSANSLTLA 112
Query: 408 VA*PLTATAEALSLGRARSML 346
A PLT + LS+ R ++
Sbjct: 113 TAAPLTVSNNQLSINTGRGLV 133
>UniRef50_UPI0000F2B42A Cluster: PREDICTED: similar to T-cell
immunoglobulin and mucin domain containing 4; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to T-cell
immunoglobulin and mucin domain containing 4 -
Monodelphis domestica
Length = 373
Score = 32.3 bits (70), Expect = 8.8
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -1
Query: 588 TSXPKRTTLRADSTLPTVRTALSSLTL-----MLGSNRKLTVETRRISSTTRLPLLATAN 424
T+ P TTL +TLPT T L++ TL + + LT TR ++T T
Sbjct: 145 TTRPTTTTLPTTTTLPTTTTLLTTTTLPTTTTLPTTTIHLTTTTRSTTTTRSTTTTLTTT 204
Query: 423 SLPKMVA*PLTAT 385
+ P P T T
Sbjct: 205 TRPTTTPLPSTTT 217
>UniRef50_Q997H2 Cluster: Fiber; n=1; Bovine adenovirus 4|Rep: Fiber
- Bovine adenovirus 4 (BAdV-4)
Length = 535
Score = 32.3 bits (70), Expect = 8.8
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 510 LMLGSNRKLTVETRRISSTTRLPLLATANSLPKMVA*PLTATAEALSLGRARSM-LNVVG 334
L LG N LTVE+ +++ T P+ +T + VA P + ++ LSL A + +N G
Sbjct: 355 LALGLNNSLTVESGKLAVKTAGPIQSTEQGINLSVANPFSISSNQLSLKLAFPLTINTAG 414
>UniRef50_Q3VZF1 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 167
Score = 32.3 bits (70), Expect = 8.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 397 VDGDSRGAEFGEGKVDAECSWSQKVESDVIDDNVAD 290
+DGD F +GK DAE + + V+ +V+D V D
Sbjct: 110 LDGDLVDGGFQDGKADAEAADGEVVDGEVVDGEVVD 145
>UniRef50_Q9LPE7 Cluster: T12C22.11 protein; n=2; Arabidopsis
thaliana|Rep: T12C22.11 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1206
Score = 32.3 bits (70), Expect = 8.8
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Frame = -3
Query: 460 FDDKASTTGYS-QFPAKDGGLTVDG------DSRGAEFGEGKVDAECSWSQKVESDVIDD 302
F+DK T S + P VD SR A+ G G + + S S V +DD
Sbjct: 364 FEDKVDTANLSCETPGSSSKRKVDSLYDTTSGSRNADTGSGDISSGVSKSPNVLVTPVDD 423
Query: 301 NVADALESQFGYCARCAEDVRNWESVIAFGFFDVDWVKSTFLDTRSDAV-DGV 146
DAL AR + +++ E VI D+ +V F+D +++ DG+
Sbjct: 424 EFMDALHDAEEKIAR-SGGLKSNEEVIVDDEDDI-FVDDLFVDNKTEETEDGI 474
>UniRef50_A0BS33 Cluster: Chromosome undetermined scaffold_124,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_124,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 743
Score = 32.3 bits (70), Expect = 8.8
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +2
Query: 290 ISNVVVNDVTFNLLRPTTFSIDLALPKLSASAVAVNGQATIFGRELAVASSGSLVVEDIR 469
ISN ++ + FN + ++FSI AL K + + ++ + +++++ S I
Sbjct: 535 ISNRLIQGLAFNEHKKSSFSIKSALQKYTQISFYISDMIILKEDNESISNAQSDDAHCIS 594
Query: 470 LVSTVSLRLLPSINVR--ELSAVLTVGNVE---SALKVVL 574
+ +V +L+ +I+++ SA+L V +V ALK +L
Sbjct: 595 MYKSVDYKLIQNIHLKSCNCSAILLVDDVPFNIQALKTIL 634
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,140,902
Number of Sequences: 1657284
Number of extensions: 9587196
Number of successful extensions: 34317
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34260
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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