Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c02r
         (392 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    75   6e-13
UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1; ...    34   0.85 
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    34   1.1  
UniRef50_Q4YGX6 Cluster: Putative uncharacterized protein; n=1; ...    33   2.6  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    32   3.4  
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   4.5  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    32   4.5  
UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1; ...    31   7.9  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 74.5 bits (175), Expect = 6e-13
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = -2

Query: 235 IYGTGGLLTPLVAPVLXXXXXXXXXXXXXXXXXAYYGNLVAGSIVSQLTXAAMVAPTP 62
           IYGTGGLLTP+VAP+L                 AYYGN+VAGS++SQLT AAM+APTP
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1;
           Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
           protein - Aurantimonas sp. SI85-9A1
          Length = 215

 Score = 34.3 bits (75), Expect = 0.85
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = -1

Query: 281 GASSCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNS-GRKHSRCCTSILRKFSGR-Q 108
           G  S   G  GR+        +    +G R+  + SGN  G+   R C     +  GR Q
Sbjct: 45  GEQSLAPGNSGRQITGKQKRSNNGQEAGQRSEPRHSGNERGKAEQRWCVDESNRRGGRSQ 104

Query: 107 HCVTVDXCCHGSPH 66
            CV     CHGSP+
Sbjct: 105 LCVAAAMRCHGSPN 118


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -1

Query: 299 QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSRAR 186
           Q L+EHG    S ++G+R  RC N WH G  D +   R R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_Q4YGX6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 116

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 24/75 (32%), Positives = 33/75 (44%)
 Frame = -1

Query: 287 EHGASSCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFSGRQ 108
           E G+ SC++G    RC      G    ISGS +    +      + RC TS LR  +G  
Sbjct: 12  ETGSHSCVTGNH--RC----ETGDHSCISGSHSCVTGNHICETGNHRCVTSNLRCETGSH 65

Query: 107 HCVTVDXCCHGSPHA 63
            CVT +  C    H+
Sbjct: 66  SCVTSNHRCETGDHS 80


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 320 LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 201
           L + R   K+KEHG  + +S   G   CN   +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3766,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 328

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 190 AREPLMESTDPQCHILQHRRPRLPLMQLE 276
           A +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 5   AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 272  SCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGN 168
            +C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 973  NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 495

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -1

Query: 251 GRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFSGRQH 105
           G RC  IW W ++     S A+ +L   SG  H R   S L++   R+H
Sbjct: 334 GSRCSRIWVWRNI-----SAAQLRLGRXSGLPHRRKKXSALQQILHREH 377


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,707,437
Number of Sequences: 1657284
Number of extensions: 5944820
Number of successful extensions: 12776
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12771
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)