Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c01r
         (757 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54ZY7 Cluster: Putative uncharacterized protein; n=2; ...    34   4.4  

>UniRef50_Q54ZY7 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 667

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
 Frame = +1

Query: 25  K*RPKTFVYILIDQYYTQYILKYSKVYKMKRIVLIRK*A*KDLFKFSSV-----YLESNI 189
           K +P T+ Y +   Y  +YI  Y+ +YK   I L+R+   KD+ KF+ +     Y E NI
Sbjct: 543 KIKPVTYYYYMALSY--EYIDPYNNIYKHDYIDLLRRNPPKDIRKFNKLLLSQDYREGNI 600

Query: 190 AH 195
            H
Sbjct: 601 QH 602


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,842,053
Number of Sequences: 1657284
Number of extensions: 10654514
Number of successful extensions: 17819
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 17277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17817
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)