Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c01f
(631 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.61
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 4.3
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 4.3
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 7.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 7.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 7.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.5
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 9.9
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 21 9.9
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.0 bits (52), Expect = 0.61
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 319 SAKS*TAPACCRVLSSFSSCCDLGPG 242
S++S TA A R+ +FSS CD PG
Sbjct: 59 SSESLTAQAHHRLYPAFSSSCDPVPG 84
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 405 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 286
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINHIEQIPVPV 116
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 405 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 286
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 405 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 286
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 405 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 286
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 405 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 286
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 405 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 286
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 564 CCPTQRVQQIITHFSIS 514
CCP I+ FSIS
Sbjct: 233 CCPNDTYPMIVYEFSIS 249
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 423 ELLSAFEDQHNLKSLIN-RPALGVFPSAD 506
E+ +AF +NLK L+N G PS D
Sbjct: 272 EISNAFRGNNNLKWLVNWGEQWGFLPSKD 300
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 589 QEPHIIVAMLSNPTGPTDNNTFFNFSGQ 506
+EP II + LSN T +NN +N++ +
Sbjct: 77 REPKII-SSLSNKTIHNNNNYKYNYNNK 103
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 589 QEPHIIVAMLSNPTGPTDNNTFFNFSGQS 503
+EP II + LSN T +NN +N++ +
Sbjct: 77 REPKII-SSLSNKTIHNNNNYKYNYNNNN 104
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 589 QEPHIIVAMLSNPTGPTDNNTFFNFSGQS 503
+EP II + LSN T +NN +N++ +
Sbjct: 77 REPKII-SSLSNKTIHNNNNYKYNYNNNN 104
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 589 QEPHIIVAMLSNPTGPTDNNTFFNFSGQS 503
+EP II + LSN T +NN +N++ +
Sbjct: 77 REPKII-SSLSNKTIHNNNNYKYNYNNNN 104
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 589 QEPHIIVAMLSNPTGPTDNNTFFNFSGQS 503
+EP II + LSN T +NN +N++ +
Sbjct: 310 REPKII-SSLSNKTIHNNNNYKYNYNNNN 337
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 240 SLFEYWVYLVHAAKPNKP 187
S+ + +V VHA KP KP
Sbjct: 236 SMAKSFVRKVHATKPPKP 253
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 199 FCSMNQINPIFKQRFPGPS 255
FC N INP F P S
Sbjct: 48 FCGPNVINPFFCDMSPSLS 66
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,546
Number of Sequences: 438
Number of extensions: 3541
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -