Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b20f
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.52 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.52 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.4  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 620 QSKFDMTVPRHRL*KNGHKYRLTVHH 543
           ++  DM++ RH++   GH +   +HH
Sbjct: 344 ENMMDMSLTRHQISSMGHSHAHPMHH 369


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 620 QSKFDMTVPRHRL*KNGHKYRLTVHH 543
           ++  DM++ RH++   GH +   +HH
Sbjct: 344 ENMMDMSLTRHQISSMGHSHAHPMHH 369


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +1

Query: 70  YLNNISKWATPLSRSSFSPSFGVWLVLFAPSSHLKDQTE 186
           ++N+I K A  +++S  SP++ +     + +S  + +TE
Sbjct: 397 FINDIVKTAKLMAKSMKSPTYALKFEYRSMNSWFEHETE 435


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +1

Query: 70  YLNNISKWATPLSRSSFSPSFGVWLVLFAPSSHLKDQTE 186
           ++N+I K A  +++S  SP++ +     + +S  + +TE
Sbjct: 397 FINDIVKTAKLMAKSMKSPTYALKFEYRSMNSWFEHETE 435


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +1

Query: 70  YLNNISKWATPLSRSSFSPSFGVWLVLFAPSSHLKDQTE 186
           ++N+I K A  +++S  SP++ +     + +S  + +TE
Sbjct: 397 FINDIVKTAKLMAKSMKSPTYALKFEYRSGNSWFEHETE 435


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +1

Query: 70  YLNNISKWATPLSRSSFSPSFGVWLVLFAPSSHLKDQTE 186
           ++N+I K A  +++S  SP++ +     + +S  + +TE
Sbjct: 397 FINDIVKTAKLMAKSMKSPTYALKFEYRSGNSWFEHETE 435


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = -1

Query: 194 NNPSVWSFRC 165
           NNP  W F C
Sbjct: 662 NNPGFWLFHC 671


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,828
Number of Sequences: 336
Number of extensions: 3260
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)