Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b18r
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.3  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 225 RSTRSEPMSCSARPTEPS 278
           ++T SEP   S +PTE S
Sbjct: 405 QTTESEPTQASEQPTESS 422


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +1

Query: 268 QNLRFESHFNAHVHALSCSHSGDAHQHVIG 357
           Q L    H N  +H    +H      HV+G
Sbjct: 37  QGLHHSPHLNHAMHPYHANHVNPTANHVMG 66


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 128 SKSLTISSFLKPPS*FLLDGAVGTSPGTG 214
           S S  ISS   PP  F +D  + + PG G
Sbjct: 176 SVSPLISSSSSPPGVFPVDAPMHSPPGDG 204



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 216 STPRSTRSEPMSCSARP 266
           S+PRS   +P++C   P
Sbjct: 64  SSPRSISEDPLNCRDLP 80


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/34 (29%), Positives = 12/34 (35%)
 Frame = +1

Query: 262 VQQNLRFESHFNAHVHALSCSHSGDAHQHVIGQF 363
           +   + F  HFN H       HS    Q   G F
Sbjct: 157 IHPGMTFRYHFNVHNSGTHFWHSHSGFQRSDGTF 190


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 182 DGAVGTSPGTGQYTSVD 232
           DG   TS  +GQYT+ D
Sbjct: 893 DGPYETSISSGQYTTKD 909


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 515 GASVNPSPFSRAIGKICLGTFGSIVLESIRSDPFF 619
           G S+N    S  +    LG FG  VL  +    FF
Sbjct: 114 GYSINYRRISIFVNLAILGVFGEFVLVFVPDYVFF 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,752
Number of Sequences: 336
Number of extensions: 4396
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)