Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b18f
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-8|CAB03798.1|  299|Caenorhabditis elegans Hypothetical pr...    89   1e-18
AL031630-23|CAA21003.1|  299|Caenorhabditis elegans Hypothetical...    89   1e-18
Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical p...    40   9e-04
Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical pr...    40   9e-04
Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z22178-1|CAA80153.1|  298|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z99281-40|CAB16512.1|  268|Caenorhabditis elegans Hypothetical p...    31   0.72 
Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p...    27   8.8  
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ...    27   8.8  
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ...    27   8.8  
AF045645-5|AAL06039.2|  140|Caenorhabditis elegans Ground-like (...    27   8.8  

>Z81453-8|CAB03798.1|  299|Caenorhabditis elegans Hypothetical
           protein B0250.5 protein.
          Length = 299

 Score = 89.4 bits (212), Expect = 1e-18
 Identities = 52/133 (39%), Positives = 69/133 (51%)
 Frame = +3

Query: 147 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 326
           F+GLGNMGG MA NL+K G  +  YD +K  +      G   A              ++L
Sbjct: 6   FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65

Query: 327 TSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGV 506
            S+  V  VY G+ G+    + G+L +DSSTID  V  ++   A      + DAP+SGGV
Sbjct: 66  PSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGV 125

Query: 507 MGAQNATLAFMAG 545
            GAQ ATL FM G
Sbjct: 126 TGAQQATLTFMVG 138


>AL031630-23|CAA21003.1|  299|Caenorhabditis elegans Hypothetical
           protein B0250.5 protein.
          Length = 299

 Score = 89.4 bits (212), Expect = 1e-18
 Identities = 52/133 (39%), Positives = 69/133 (51%)
 Frame = +3

Query: 147 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 326
           F+GLGNMGG MA NL+K G  +  YD +K  +      G   A              ++L
Sbjct: 6   FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65

Query: 327 TSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGV 506
            S+  V  VY G+ G+    + G+L +DSSTID  V  ++   A      + DAP+SGGV
Sbjct: 66  PSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGV 125

Query: 507 MGAQNATLAFMAG 545
            GAQ ATL FM G
Sbjct: 126 TGAQQATLTFMVG 138


>Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score = 40.3 bits (90), Expect = 9e-04
 Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
 Frame = +3

Query: 132 DKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS----KDAL-NAAAKNGVTPANSIXXXX 296
           + ++A +GL  MG  +  N+   GFTV  ++ +     D L N A    +  A+SI    
Sbjct: 3   EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62

Query: 297 XXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLG 476
                   ++   K    V +  D +V H ++G ++ID    +     +       KG+ 
Sbjct: 63  KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122

Query: 477 FTDAPVSGGVMGAQ 518
           F    VSGG  GA+
Sbjct: 123 FVGCGVSGGEEGAR 136


>Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score = 40.3 bits (90), Expect = 9e-04
 Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
 Frame = +3

Query: 132 DKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS----KDAL-NAAAKNGVTPANSIXXXX 296
           + ++A +GL  MG  +  N+   GFTV  ++ +     D L N A    +  A+SI    
Sbjct: 3   EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62

Query: 297 XXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLG 476
                   ++   K    V +  D +V H ++G ++ID    +     +       KG+ 
Sbjct: 63  KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122

Query: 477 FTDAPVSGGVMGAQ 518
           F    VSGG  GA+
Sbjct: 123 FVGCGVSGGEEGAR 136


>Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical
           protein C31C9.2 protein.
          Length = 322

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +3

Query: 135 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKN 260
           + +A LGLG +G  +A  L   G  V G+DP      A AKN
Sbjct: 146 RTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKN 187


>Z22178-1|CAA80153.1|  298|Caenorhabditis elegans Hypothetical
           protein F54C8.1 protein.
          Length = 298

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +3

Query: 135 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAK 257
           +NVA +G G MG  +A      GF V   D +K AL+ A K
Sbjct: 12  RNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMK 52


>Z99281-40|CAB16512.1|  268|Caenorhabditis elegans Hypothetical
           protein Y57G11C.11a protein.
          Length = 268

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 156 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAA 251
           +G+ GG ++  L + GF V G D +K A+ AA
Sbjct: 82  VGSGGGLLSIPLARSGFDVTGIDATKQAVEAA 113


>Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical
           protein F13H10.4c protein.
          Length = 792

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 303 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 208
           L+ RL++W  W+   +S P R+ + W+ R+  +
Sbjct: 484 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 516


>Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical
           protein F13H10.4b protein.
          Length = 789

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 303 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 208
           L+ RL++W  W+   +S P R+ + W+ R+  +
Sbjct: 481 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 513


>Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical
           protein F13H10.4a protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 303 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 208
           L+ RL++W  W+   +S P R+ + W+ R+  +
Sbjct: 488 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 520


>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
           protein F59A3.1 protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = -3

Query: 455 YREDLFGNIRIYCTRIDQKRSFFRMSHNAIFAQVHVEHDFIAGQYG--NDHVDSINGCSN 282
           Y + + G   IY    D K  F  +S+   +A+ H +      + G   D  + ING +N
Sbjct: 261 YDDSVTGQDGIYTASADDKL-FVELSYR--YARAHTKMWKTGRRCGLSADGDNFINGITN 317

Query: 281 GVGWRH 264
           G GW H
Sbjct: 318 GAGWYH 323


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 417  YSNRSEAILFSHEPQRHLCPGTRRARL 337
            ++  SEA+++ H PQ  + PGT  A +
Sbjct: 1469 FTRNSEAVMWLHSPQHAVVPGTPIAEI 1495


>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +2

Query: 206 HSSRLRSFQRCTERSGQER 262
           H SR +SF++ T+R+G+E+
Sbjct: 141 HGSRRKSFEKFTDRNGEEK 159


>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +2

Query: 206 HSSRLRSFQRCTERSGQER 262
           H SR +SF++ T+R+G+E+
Sbjct: 141 HGSRRKSFEKFTDRNGEEK 159


>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +2

Query: 206 HSSRLRSFQRCTERSGQER 262
           H SR +SF++ T+R+G+E+
Sbjct: 141 HGSRRKSFEKFTDRNGEEK 159


>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +2

Query: 206 HSSRLRSFQRCTERSGQER 262
           H SR +SF++ T+R+G+E+
Sbjct: 141 HGSRRKSFEKFTDRNGEEK 159


>AF045645-5|AAL06039.2|  140|Caenorhabditis elegans Ground-like (grd
           related) protein26 protein.
          Length = 140

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 524 SVLSTHDSSRYRCICESQPF 465
           S L  HDS RY  +C   PF
Sbjct: 96  SALEDHDSHRYVVVCSENPF 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,091,789
Number of Sequences: 27780
Number of extensions: 318956
Number of successful extensions: 924
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)