Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b12r
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    87   5e-19
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    87   5e-19
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   5.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.0  
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        23   7.0  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 86.6 bits (205), Expect = 5e-19
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
 Frame = -1

Query: 498 NNDFHNYTLEWRPDGITXLVDGESYGEIKPGEGFYNVANSYKVEAAPQWLKGTIMAPFDE 319
           +  F  +   W PD IT  ++GE    I  G  F+      K      W  GT MAPFD+
Sbjct: 266 SKSFSTFGFVWTPDNITVSINGEDLATI--GGDFWTRGGFDKHNLENPWRHGTRMAPFDQ 323

Query: 318 LXYVSIGLNVAGIREFSEDISN---KPWKNSATKAMLKXWDARSQWFPTWD------EDS 166
             +  I L V G+  F +  +N   KPWKN++ +A    W+ R+QW PTW+      + +
Sbjct: 324 EFHFIINLAVGGVAFFPDAATNPGGKPWKNNSPQAATDFWNGRAQWLPTWNLERDGGKSA 383

Query: 165 ALQVDYVKVFAI 130
           +L VDYVKV+A+
Sbjct: 384 SLLVDYVKVWAL 395


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 86.6 bits (205), Expect = 5e-19
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
 Frame = -1

Query: 498 NNDFHNYTLEWRPDGITXLVDGESYGEIKPGEGFYNVANSYKVEAAPQWLKGTIMAPFDE 319
           +  F  +   W PD IT  ++GE    I  G  F+      K      W  GT MAPFD+
Sbjct: 266 SKSFSTFGFVWTPDNITVSINGEDLATI--GGDFWTRGGFDKHNLENPWRHGTRMAPFDQ 323

Query: 318 LXYVSIGLNVAGIREFSEDISN---KPWKNSATKAMLKXWDARSQWFPTWD------EDS 166
             +  I L V G+  F +  +N   KPWKN++ +A    W+ R+QW PTW+      + +
Sbjct: 324 EFHFIINLAVGGVAFFPDAATNPGGKPWKNNSPQAATDFWNGRAQWLPTWNLERDGGKSA 383

Query: 165 ALQVDYVKVFAI 130
           +L VDYVKV+A+
Sbjct: 384 SLLVDYVKVWAL 395


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 390 VANSYKVEAAPQWLKGTIMAPFD 322
           ++  Y V     W KGTI+ P D
Sbjct: 403 ISACYAVIVRTIWAKGTILGPID 425


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 438  DGESYGEIKPGEGFYNVANSY 376
            DG S  E+KP +   N +N+Y
Sbjct: 1690 DGSSQTEMKPKQNCVNSSNTY 1710


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 277 SDSSHIKTDRHIXQFIKRRHDCAFKP 354
           +D+     DR + +  K R  CAF P
Sbjct: 260 ADAERFDPDRFLSERCKNRMGCAFMP 285


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,258
Number of Sequences: 2352
Number of extensions: 10958
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)