Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b12r
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.6  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   8.6  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   8.6  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   8.6  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   8.6  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   8.6  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   8.6  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   8.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 252  KPWKNSATKAMLKXWDARSQWF 187
            +PW+ SAT A     D   +W+
Sbjct: 1325 RPWRGSATLACNAVGDPTREWY 1346


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 252  KPWKNSATKAMLKXWDARSQWF 187
            +PW+ SAT A     D   +W+
Sbjct: 1321 RPWRGSATLACNAVGDPTREWY 1342


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 190 PLTTGVPXFEHCFSGRVFPRLI 255
           P+   +P F H      FPR I
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFI 163


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 190 PLTTGVPXFEHCFSGRVFPRLI 255
           P+   +P F H      FPR I
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFI 163


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 190 PLTTGVPXFEHCFSGRVFPRLI 255
           P+   +P F H      FPR I
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFI 163


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 190 PLTTGVPXFEHCFSGRVFPRLI 255
           P+   +P F H      FPR I
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFI 163


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 190 PLTTGVPXFEHCFSGRVFPRLI 255
           P+   +P F H      FPR I
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFI 163


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 190 PLTTGVPXFEHCFSGRVFPRLI 255
           P+   +P F H      FPR I
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFI 163


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 190 PLTTGVPXFEHCFSGRVFPRLI 255
           P+   +P F H      FPR I
Sbjct: 145 PMQEQIPRFRHIGPSTPFPRFI 166


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 62  ILHSVGTLLIIIIPTMFSDVASH 130
           I+ S+G  L++I+P +     +H
Sbjct: 223 IVRSIGNSLMVILPDLVGKKITH 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,400
Number of Sequences: 438
Number of extensions: 3758
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)