Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b10r
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z38112-6|CAA86235.2|  870|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z35637-7|CAA84690.2|  870|Caenorhabditis elegans Hypothetical pr...    27   9.8  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     27   9.8  
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical...    27   9.8  
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical...    27   9.8  

>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
            E03A3.6 protein.
          Length = 2089

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 103  KHGAGM*HFVL*LFAGKLVTSYTQDTI*SYAYTHFCQIWTI 225
            +H A   HFVL  FA +   S    +   +A+ H CQ+WT+
Sbjct: 1922 QHMADYIHFVLAGFADQSKQSVVHMSALFHAF-HLCQLWTV 1961


>Z38112-6|CAA86235.2|  870|Caenorhabditis elegans Hypothetical
           protein E03A3.6b protein.
          Length = 870

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 103 KHGAGM*HFVL*LFAGKLVTSYTQDTI*SYAYTHFCQIWTI 225
           +H A   HFVL  FA +   S    +   +A+ H CQ+WT+
Sbjct: 703 QHMADYIHFVLAGFADQSKQSVVHMSALFHAF-HLCQLWTV 742


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
            E03A3.6 protein.
          Length = 2089

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 103  KHGAGM*HFVL*LFAGKLVTSYTQDTI*SYAYTHFCQIWTI 225
            +H A   HFVL  FA +   S    +   +A+ H CQ+WT+
Sbjct: 1922 QHMADYIHFVLAGFADQSKQSVVHMSALFHAF-HLCQLWTV 1961


>Z35637-7|CAA84690.2|  870|Caenorhabditis elegans Hypothetical
           protein E03A3.6b protein.
          Length = 870

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 103 KHGAGM*HFVL*LFAGKLVTSYTQDTI*SYAYTHFCQIWTI 225
           +H A   HFVL  FA +   S    +   +A+ H CQ+WT+
Sbjct: 703 QHMADYIHFVLAGFADQSKQSVVHMSALFHAF-HLCQLWTV 742


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 103  KHGAGM*HFVL*LFAGKLVTSYTQDTI*SYAYTHFCQIWTI 225
            +H A   HFVL  FA +   S    +   +A+ H CQ+WT+
Sbjct: 1917 QHMADYIHFVLAGFADQSKQSVVHMSALFHAF-HLCQLWTV 1956


>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
           protein C09E7.8b protein.
          Length = 1080

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 382 YLMSKCFKLFNAVXXXXXXIVCCYVKKKNLTLMPFKGT 269
           ++M+   +LF  V       VC YVK   + L PF+ T
Sbjct: 348 HVMNNVLRLFQKVKKEMWHFVCGYVKILEVRLKPFEDT 385


>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
           protein C09E7.8a protein.
          Length = 1114

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 382 YLMSKCFKLFNAVXXXXXXIVCCYVKKKNLTLMPFKGT 269
           ++M+   +LF  V       VC YVK   + L PF+ T
Sbjct: 382 HVMNNVLRLFQKVKKEMWHFVCGYVKILEVRLKPFEDT 419


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,255,147
Number of Sequences: 27780
Number of extensions: 271539
Number of successful extensions: 490
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)