Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11b10f
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0543 - 18649894-18650233,18651446-18651981 97 1e-20
02_05_0089 - 25715637-25716333,25716481-25717238 95 5e-20
03_02_0826 + 11569961-11570301,11572220-11572454 93 1e-19
10_08_0544 - 18655186-18655567,18656835-18657151 93 2e-19
02_05_1047 + 33745656-33745964 87 8e-18
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 37 0.014
03_02_0079 + 5485090-5485238,5486066-5486137,5486764-5486840,548... 33 0.18
07_03_0382 + 17470508-17470807,17471449-17474517 30 1.7
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 29 3.8
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 29 3.8
03_01_0314 - 2477593-2480685 29 3.8
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 29 3.8
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 28 5.1
01_06_0011 - 25559099-25559238,25559781-25559814,25560172-255603... 28 5.1
12_01_0981 + 9931542-9931606,9931779-9933105 28 6.7
04_03_0459 + 16159015-16159771,16160251-16160365,16160478-161608... 28 6.7
08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991 27 8.9
06_01_0210 - 1596578-1596868,1598550-1598828,1600503-1600511,160... 27 8.9
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 27 8.9
>10_08_0543 - 18649894-18650233,18651446-18651981
Length = 291
Score = 97.1 bits (231), Expect = 1e-20
Identities = 48/112 (42%), Positives = 71/112 (63%)
Frame = +1
Query: 265 SKVAPLKKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVF 444
S+ AP P ++TA EL QYDG+ +LMA+ G I+DV++ FYGPGGPYA+F
Sbjct: 132 SEEAPPPPEPVQVGEITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALF 191
Query: 445 GGRDATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 600
G+DA+R LA S P+ DD+S L+ +E+ ++++WE +F Y VG +
Sbjct: 192 AGKDASRALAKMSF-EPQDLTDDISGLSLLELSALQDWEYKFSSKYVKVGTI 242
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 94.7 bits (225), Expect = 5e-20
Identities = 45/98 (45%), Positives = 62/98 (63%)
Frame = +1
Query: 307 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 486
++T ELR YDG+ +LMA+ G I+DVT+ FYGPGGPYA+F GRDA+R LA S
Sbjct: 220 EVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRDASRALAKMSF 279
Query: 487 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 600
+ D+S L +E+E++ EWE +F Y VG +
Sbjct: 280 ELDDLT-GDVSGLGPIELEALHEWEGKFMSKYVKVGTI 316
>03_02_0826 + 11569961-11570301,11572220-11572454
Length = 191
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/98 (44%), Positives = 61/98 (62%)
Frame = +1
Query: 307 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 486
++T +L YDG +L+A+ G ++DVTRG FYGP GPY++F GRDATR LA S
Sbjct: 81 EITLEQLAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSLFAGRDATRALALMSF 140
Query: 487 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 600
P DL L E+E +++WE++F+E Y VG L
Sbjct: 141 D-PIDLTGDLDGLGPDELEVLQDWEDKFKERYPTVGHL 177
>10_08_0544 - 18655186-18655567,18656835-18657151
Length = 232
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/96 (44%), Positives = 63/96 (65%)
Frame = +1
Query: 307 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 486
+++ ELRQYDG+ +LMA+ G I+DVT+ FYGPGGPYA+F G+DA+R LA S
Sbjct: 73 EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 132
Query: 487 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVG 594
P+ D+S L E++++++WE +F Y VG
Sbjct: 133 -EPQDLTGDISGLGPFELDALQDWEYKFMGKYVKVG 167
>02_05_1047 + 33745656-33745964
Length = 102
Score = 87.4 bits (207), Expect = 8e-18
Identities = 41/98 (41%), Positives = 60/98 (61%)
Frame = +1
Query: 307 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 486
++TA +LR YDG+ + ++V G ++DVT G FYGPGG YAVF GR+A+R L S
Sbjct: 4 ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAVFAGREASRALGKMSK 63
Query: 487 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 600
+ DLS L+ E+ + +WE +F+ Y +V RL
Sbjct: 64 DDADVS-GDLSGLSDKELGVLADWETKFQAKYPVVARL 100
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 36.7 bits (81), Expect = 0.014
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +1
Query: 163 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAP-LKKLPKLRKDMTAVELRQYD 339
+ +KT+ VF S +L +FY + HC K+AP L+++ KD V + + D
Sbjct: 370 QPVKTVVADNLREVVFNSGKNVLLEFYAPWCGHCQKLAPILEEVAVSLKDDEDVVIAKMD 429
Query: 340 GTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDA 459
GT AV G+ FY GG + GR A
Sbjct: 430 GTANDVPSDFAVEGY-----PSMYFYSSGGNLLPYDGRTA 464
>03_02_0079 +
5485090-5485238,5486066-5486137,5486764-5486840,
5486946-5486989,5487583-5487639,5487640-5487686,
5488010-5488184,5489501-5489662,5489845-5489883
Length = 273
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 385 IFDVTRGNRFYGPGGPYAVFGG 450
+FDVT+G YGPGG Y F G
Sbjct: 52 VFDVTKGKSNYGPGGGYHHFAG 73
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 283 KKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGN 408
KK+P K + AV LR+ + TQE + + GW FD RG+
Sbjct: 359 KKIPMAVKIIGAV-LRRKEQTQESWQRVYEFEGWSFDDLRGD 399
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 163 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAPL 282
E +K + FVF S +L +FY + HC K+AP+
Sbjct: 384 EPVKVVVADNVHDFVFKSGKNVLVEFYAPWCGHCKKLAPI 423
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 490 APEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPG 612
AP K YD+ L M+ E + E EE F L+ + + G
Sbjct: 2 APSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSG 42
>03_01_0314 - 2477593-2480685
Length = 1030
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 351 GWQSVDGCEWVDIRCD*RESV 413
GW S C W +RCD R +V
Sbjct: 50 GWSSAPHCTWKGVRCDARGAV 70
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -2
Query: 449 PPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPSYCRSSTAVISFRNLGSFFKGAT 270
PP A PP P P+V TA TLPP P+ S++ + + S G T
Sbjct: 35 PPPPAPPPPPPPRLEPVVVVAPSTTTATATLPPIITPTLSPSTSTCLECVHFNS-CSGCT 93
Query: 269 FE 264
E
Sbjct: 94 HE 95
>02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +1
Query: 427 GPYAVFGGRDATRGLATFS--VTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 600
G Y GR RGL + + + SDL ++ + E QFR Y ++ L
Sbjct: 856 GEYIQMAGRAGRRGLDNIGTVIVMCRDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHL 915
Query: 601 LR 606
LR
Sbjct: 916 LR 917
>01_06_0011 -
25559099-25559238,25559781-25559814,25560172-25560333,
25560335-25560454
Length = 151
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 357 QSVDGCEWVDIRCD 398
Q VD C W D+RCD
Sbjct: 129 QDVDPCNWKDVRCD 142
>12_01_0981 + 9931542-9931606,9931779-9933105
Length = 463
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = -2
Query: 530 ELRSLKSS*SFSGAVTENVASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPP 351
+L+S K + EN+ + SL PP P N P N F +T+PP
Sbjct: 15 KLKSTKMRNMSNSPNQENIEMTMTPSLVTTLPLPPPPP-NHIPTTERNTSVFFNTSTIPP 73
Query: 350 SCVPSY 333
P +
Sbjct: 74 PPPPHF 79
>04_03_0459 +
16159015-16159771,16160251-16160365,16160478-16160844,
16160930-16161244,16161324-16161644,16161730-16161882
Length = 675
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = +1
Query: 259 HCSKVAP----LKKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPG 426
HCSK K PK ++ A E +G R +G+ V G+R P
Sbjct: 213 HCSKCDERGHTYKHCPKDKEKPNAAEAGLSGSAVDGARPTDGTSGYTSVVGPGDRSPTPV 272
Query: 427 GPYAVFGGRD 456
PY GG D
Sbjct: 273 SPYCGTGGSD 282
>08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991
Length = 1165
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 92 FLPRIKWIHHQRLKMCKPNTVAF 160
+L ++W + CKPNT+AF
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAF 427
>06_01_0210 -
1596578-1596868,1598550-1598828,1600503-1600511,
1600713-1600781
Length = 215
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 379 HSQPSTLCHPPVSRR 335
HS PS L HPPV R
Sbjct: 128 HSDPSNLAHPPVEHR 142
>01_05_0501 +
22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 449 PPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVP 339
PP PP P VTS++ P++ ++LPPS P
Sbjct: 80 PPPPPPPPPVPVPPAYSVTSSVPPYSMTSSLPPSPRP 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,141,376
Number of Sequences: 37544
Number of extensions: 372237
Number of successful extensions: 1048
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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