Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b08r
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   1.7  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    25   2.2  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    25   2.2  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    25   2.2  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   6.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.0  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 227 PVTIKVAPEGGSCSLPTLQQAEVTNK 304
           P T   APEG S + PT  +A  T +
Sbjct: 116 PTTSTAAPEGTSVASPTTAEASTTTE 141


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 493 KVKYVSGVGYFSSIYIII 546
           KV+YV+G+GYF   + ++
Sbjct: 151 KVEYVNGLGYFKDDHTVV 168


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 493 KVKYVSGVGYFSSIYIII 546
           KV+YV+G+GYF   + ++
Sbjct: 127 KVEYVNGLGYFKDDHTVV 144


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 493 KVKYVSGVGYFSSIYIII 546
           KV+YV+G+GYF   + ++
Sbjct: 124 KVEYVNGLGYFKDDHTVV 141


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 521 YPTPETYLTLNSAVYKAFRTVQPSTPTATFGWPCLEAHACSRSILK 384
           Y T    +T+N    K    VQPS  TAT G+   E + C  S L+
Sbjct: 106 YRTCNGDVTVNKCEGKCNSQVQPSVITAT-GF-LKECYCCRESFLR 149


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 504  IFDFKQRGLQGIPDGTTIDTDGN 436
            +F+F++  L  +P G   DT+ N
Sbjct: 1161 LFNFQRNKLTSLPVGEVFDTNSN 1183



 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 411  SCVLKINPKNGEILQK 364
            +C ++I P  GEILQK
Sbjct: 1517 NCRIEIQPAYGEILQK 1532


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 504  IFDFKQRGLQGIPDGTTIDTDGN 436
            +F+F++  L  +P G   DT+ N
Sbjct: 1162 LFNFQRNKLTSLPVGEVFDTNSN 1184



 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 411  SCVLKINPKNGEILQK 364
            +C ++I P  GEILQK
Sbjct: 1518 NCRIEIQPAYGEILQK 1533


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,233
Number of Sequences: 2352
Number of extensions: 16028
Number of successful extensions: 40
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)