Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b08f
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   4.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.0  
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       23   7.9  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 446 CLLELWVMKILQVTL 490
           CLLE+ + KILQ+T+
Sbjct: 234 CLLEVTLQKILQLTI 248


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -2

Query: 342  SIPLYEKELAFDSHYKLVCCTFHW*YETNPPI*TGFCMFFSSWYIFVYSFILDAHK 175
            SI LY    +      L   T H  Y  N PI + F +F   +Y+F +   L++ +
Sbjct: 911  SISLYVPSRSLRPRDPLSIETRHTLYTFNDPILSCFRLFNHFYYLFDFDSSLNSFR 966


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = +3

Query: 198 YTQICTNY*KTYKNQFRWEGWFHITSGRYNRPICSGSRTQVPFHTVGW 341
           YT++     K  K      GW      +Y+R + + +R +   H +G+
Sbjct: 52  YTRVVAAKEKGVKVTLAIGGWNDSAGDKYSRLVRTSARAKFVEHVIGF 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,143
Number of Sequences: 2352
Number of extensions: 9865
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)