Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11b07r
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0398 - 20379748-20379820,20379930-20380024,20380127-203802... 217 5e-57
02_02_0198 + 7705868-7706065,7706955-7707052,7707269-7707374,770... 196 2e-50
01_06_0786 - 31992357-31992441,31992632-31992752,31993371-319934... 184 5e-47
05_06_0059 - 25264704-25266032 37 0.014
03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798 35 0.055
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 35 0.073
10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393 34 0.097
01_07_0150 + 41508546-41508636,41509384-41510343,41511082-415115... 34 0.097
08_01_0876 - 8598664-8599374 33 0.30
04_04_0683 - 27234137-27234486,27234645-27234756,27234889-272349... 33 0.30
07_03_1133 - 24199643-24200422,24200786-24200968,24201241-242013... 32 0.39
11_06_0692 + 26327487-26328509 32 0.52
06_01_1195 + 10280864-10280979,10281024-10281115,10281211-102821... 32 0.52
12_01_1046 - 10756062-10756326,10757618-10757782,10757901-107582... 31 0.68
04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753... 31 0.90
02_03_0068 + 14711891-14712418 31 0.90
05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111 31 1.2
05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128... 31 1.2
03_06_0539 - 34600323-34601273 31 1.2
03_06_0534 + 34570080-34571030 31 1.2
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 31 1.2
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591... 30 1.6
05_04_0175 - 18742156-18743592 30 1.6
04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814 30 1.6
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 30 1.6
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 30 2.1
07_03_0909 + 22512313-22512474,22513151-22513465,22513539-225166... 30 2.1
05_02_0092 - 6522057-6523502 30 2.1
03_06_0622 - 35151980-35152492 30 2.1
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199... 29 2.8
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 29 3.6
08_02_0279 - 15249361-15249612,15251270-15251506,15252704-152527... 29 3.6
08_01_0955 + 9478018-9478773 29 3.6
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 3.6
04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 29 3.6
03_02_0996 - 13082540-13082818,13083107-13083221,13084135-130842... 29 3.6
02_02_0419 - 10009686-10012568 29 3.6
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 29 4.8
05_07_0191 - 28303642-28303952,28304044-28304149,28304926-28305654 29 4.8
05_05_0089 - 22305727-22306115,22306206-22306311,22306386-223067... 29 4.8
02_03_0064 + 14607975-14608925 29 4.8
02_02_0424 + 10074206-10074287,10074389-10074485,10074584-100746... 29 4.8
12_02_0811 - 23370455-23370472,23372279-23372538,23372645-233727... 28 6.4
10_08_0912 - 21520088-21520426,21520534-21520674,21521235-215212... 28 6.4
08_01_1000 + 10154024-10154147,10155500-10155761,10155839-101558... 28 6.4
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 28 6.4
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 28 6.4
04_01_0363 + 4754650-4755912 28 6.4
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 28 6.4
02_03_0131 - 15576422-15577021 28 6.4
02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467 28 6.4
12_02_0640 - 21447470-21448309 28 8.4
12_02_0635 - 21430245-21431156 28 8.4
05_03_0127 + 8744716-8744970 28 8.4
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708... 28 8.4
03_02_0076 - 5451137-5452503,5453439-5453866,5453949-5454046,545... 28 8.4
03_01_0115 - 915142-915321,915397-915631,916301-916386,916474-91... 28 8.4
02_02_0159 + 7299685-7300572 28 8.4
01_03_0184 + 13560830-13562981,13563604-13564088 28 8.4
>06_03_0398 -
20379748-20379820,20379930-20380024,20380127-20380222,
20380342-20380501,20380844-20381016,20381102-20381206,
20381460-20381565,20381741-20381947,20383478-20383563,
20383655-20383846
Length = 430
Score = 217 bits (531), Expect = 5e-57
Identities = 96/166 (57%), Positives = 132/166 (79%)
Frame = -1
Query: 710 FVKEGHQVMLAQSFAKNMGLYGERAGALTFLCGDEATAAKVMSQVKIMVRVMYSNPPLYG 531
F+++GHQ+ AQS+AKNMGLYG+RAG L+ LC DE A V SQ++ + R +YSNPP++G
Sbjct: 262 FLEDGHQIGCAQSYAKNMGLYGQRAGCLSILCDDEMQAVAVKSQLQQIARPLYSNPPVHG 321
Query: 530 ARLVQEILTNAELKKQWLGDVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQIGMFCF 351
A +V IL + ELK WL +VK MADRII MR+ L+ +E G+P W+HIT+QIGMFC+
Sbjct: 322 ALIVSTILGDPELKSLWLKEVKGMADRIIGMRTALKENLEKLGSPMSWEHITNQIGMFCY 381
Query: 350 TGLKPEQVERLTKEFHVYLTKDGRISVAGISSQNVNYIAEAIHKVT 213
+G+ PEQV+RLTKEFH+Y+T++GRIS+AG+++ NV Y+A AIH+VT
Sbjct: 382 SGMTPEQVDRLTKEFHIYMTRNGRISMAGVTTGNVAYLANAIHEVT 427
>02_02_0198 +
7705868-7706065,7706955-7707052,7707269-7707374,
7707636-7707740,7707823-7707995,7708435-7708594,
7708683-7708778,7709349-7709417,7709434-7709528,
7709615-7709687
Length = 390
Score = 196 bits (477), Expect = 2e-50
Identities = 97/189 (51%), Positives = 130/189 (68%), Gaps = 23/189 (12%)
Frame = -1
Query: 710 FVKEGHQVMLAQSFAKNMGLYGERAGALTFLCGDEATAAKVMSQVKIMVRVMYSNPPLYG 531
F+++GHQ+ AQS+AKNMGLYG+RAG L+ LC DE A V SQ++ + R MYSNPP++G
Sbjct: 199 FLEDGHQIGCAQSYAKNMGLYGQRAGCLSILCEDEMQAVSVKSQLQQIARPMYSNPPVHG 258
Query: 530 ARLVQEILTNAELKKQWLGDVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQ------ 369
A +V IL + ELK WL +VK MADRII MR LR +EG G+P W HIT+Q
Sbjct: 259 ALVVSIILNDPELKSLWLKEVKGMADRIIGMRKALRENLEGLGSPLSWDHITNQSLWRLI 318
Query: 368 -----------------IGMFCFTGLKPEQVERLTKEFHVYLTKDGRISVAGISSQNVNY 240
IGMFC++G+ PEQV+RLT E+H+Y+T++GRIS+AG+++ NV Y
Sbjct: 319 FHIQPNIIVSYMVNIKNIGMFCYSGMTPEQVDRLTNEYHIYMTRNGRISMAGVTTGNVAY 378
Query: 239 IAEAIHKVT 213
+A AIH+VT
Sbjct: 379 LANAIHEVT 387
>01_06_0786 -
31992357-31992441,31992632-31992752,31993371-31993465,
31993595-31993716,31994217-31994354,31994564-31994727,
31994835-31994955,31995049-31995148,31995329-31995412,
31996082-31996143,31996246-31996317,31996447-31996506
Length = 407
Score = 184 bits (449), Expect = 5e-47
Identities = 81/163 (49%), Positives = 119/163 (73%)
Frame = -1
Query: 710 FVKEGHQVMLAQSFAKNMGLYGERAGALTFLCGDEATAAKVMSQVKIMVRVMYSNPPLYG 531
FV +G ++++AQS+AKNMGLYGER GAL+ +CG A +V SQ+K+++R MYSNPP++G
Sbjct: 238 FVADGGELLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHG 297
Query: 530 ARLVQEILTNAELKKQWLGDVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQIGMFCF 351
A +V IL ++ + +W ++K MADRII+MR QL ++ P W HI QIGMF F
Sbjct: 298 ASIVATILKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTF 357
Query: 350 TGLKPEQVERLTKEFHVYLTKDGRISVAGISSQNVNYIAEAIH 222
TGL +QV + +E+H+Y+T DGRIS+AG+S + + ++A+AIH
Sbjct: 358 TGLNSDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIH 400
>05_06_0059 - 25264704-25266032
Length = 442
Score = 37.1 bits (82), Expect = 0.014
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Frame = -3
Query: 546 PSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPD 367
P VR PPR G +++ +A RR + D RRH GR D
Sbjct: 70 PRRVRSPPRRGRSNREELDRARDRRHGGRSDREVFD-RGRDRRHGGRSDR---------D 119
Query: 366 RHVLLH-RTQARAGRASDERVPRVPDERRTHFRRRH---LLAKRELHRRGHPQGHLINR 202
R V R + GR+ E + R D RR+ RR H L +R+ RR + +R
Sbjct: 120 REVFDRGRDRRHGGRSDREELDRERDRRRSRSRRSHCEELDRERDRRRRRSSDREVFDR 178
>03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798
Length = 289
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Frame = -3
Query: 564 PRHVLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGG-----PDHHDAEPAPRRHRGRRQ 400
PR P PP + + Q R++KAD G P EP PR+H+G +
Sbjct: 38 PRKNPNPKEEAPPPPPANNKRLNPQGGSNRKKKADAGTPSKKPKRQPPEPKPRKHKGAKS 97
Query: 399 PAP 391
P
Sbjct: 98 EKP 100
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 549 QPSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGR 406
+PS R+ HQRR + R + GGPDH ++ P R R R
Sbjct: 495 RPSPRHSRSRSPAEHQRRDVRNRLRSGRDGGGPDHRNSSPPVNRGRSR 542
>10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393
Length = 278
Score = 34.3 bits (75), Expect = 0.097
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 453 PDHHDAEPAPRRHRGRRQPAPLATHHR-PDRHVL 355
P P P R R ++QPA A HHR P+RH L
Sbjct: 128 PQKQQQLPPPPRRRAQQQPASAAAHHRNPNRHHL 161
>01_07_0150 +
41508546-41508636,41509384-41510343,41511082-41511555,
41511642-41511736
Length = 539
Score = 34.3 bits (75), Expect = 0.097
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 270 DGNASVFRQVHVELF--RQTLDLLGLESGEAEHADLVGDVLPGVRVAGALDAGAELAPHR 443
+ N+ VFR F R L L L G + ADL+ VLPG+R A A L
Sbjct: 27 EDNSGVFRDPGERGFSTRPNLSLEQLSVGPGDTADLLRKVLPGIRDASKTFAIPALKQVF 86
Query: 444 DDPVRHLLYVSEPLL 488
+D +R LL VS+ LL
Sbjct: 87 EDSIRPLL-VSKCLL 100
>08_01_0876 - 8598664-8599374
Length = 236
Score = 32.7 bits (71), Expect = 0.30
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 11/110 (10%)
Frame = -3
Query: 504 QRRTQKAMARRRKADGGPDHH-DAEPAPRRHRGRRQPAPLATHHR----PDRHVLLHRTQ 340
+RR K + R+ DGG DH + E R ++ A A+ R LL T
Sbjct: 112 RRRWAKELTTGRRRDGGGDHEAEGEGGGDLRRWAKEAAASASGPRRWTMDGAAPLLPETS 171
Query: 339 ------ARAGRASDERVPRVPDERRTHFRRRHLLAKRELHRRGHPQGHLI 208
R GR S R PR RR R RH KRE R G ++
Sbjct: 172 PKSRRGRRGGRRSPRRGPRT-RRRRCRLRLRHRSMKRERVEREREMGGVV 220
>04_04_0683 -
27234137-27234486,27234645-27234756,27234889-27234961,
27235071-27235491,27236148-27236403
Length = 403
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -1
Query: 395 HPWQHITDQIGMFCFTGLKPEQVERLTKEFHVYLTKDGRISVAGISSQNVNY 240
H W+ + C T KP Q+E+L K+ + + ++ + ++G S +++ Y
Sbjct: 91 HAWESLVPSKRRSCVTRPKPSQMEKLAKDLNSIMHEEQLLYLSGSSEEDLIY 142
>07_03_1133 -
24199643-24200422,24200786-24200968,24201241-24201321,
24201439-24201567,24201814-24201885,24201970-24202038,
24202130-24202513,24203813-24203926,24204033-24204074
Length = 617
Score = 32.3 bits (70), Expect = 0.39
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Frame = -3
Query: 564 PRHVLQPSAVRRPPRAGDTHQRRTQKAM--ARRRKADGGPD-------HHDAEPAPRRHR 412
PR L+ P AG +H +++ RR+K GG +AE R
Sbjct: 351 PRLFLEDQFDVIPSEAGSSHNSTSKRKEDEVRRKKGSGGIKISPWALARLNAEEVSRVAA 410
Query: 411 GRRQPAPLATHHRPDRHVLLHRTQARAGRASDERVPRVPDERRTHFRR 268
R+ + + R D + + H T + G S R+ PD +R RR
Sbjct: 411 EARKKSKVLLPIRKDEYAVGHETDSSYGGTSSSRIDLGPDNKRRTSRR 458
>11_06_0692 + 26327487-26328509
Length = 340
Score = 31.9 bits (69), Expect = 0.52
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Frame = -3
Query: 489 KAMARRRKADGGPDHH--DAEPAPRRHRG-----RRQPAPLATHHRPDRHVLLHRTQARA 331
K + R K+DGG +HH A P P R PAP A R R R R
Sbjct: 219 KDLLHRSKSDGGKNHHHDTAPPPPPPKRSPSPSPSPSPAPAAASARGGRGAATGRRSRR- 277
Query: 330 GRASDERVPRVPDERRTHFRRRHLLAKRE 244
R++ ER+ RRR L R+
Sbjct: 278 -RSAHERLYEARRAEAEEMRRRTYLPYRQ 305
>06_01_1195 +
10280864-10280979,10281024-10281115,10281211-10282156,
10282378-10283075,10283140-10284068
Length = 926
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = -1
Query: 296 LTKDGRISVAGISSQNVNYIAEAIHKVTS 210
LT+ ++ VAG++ +NV+Y+ EA+ K++S
Sbjct: 666 LTQLKKLGVAGVTERNVSYLCEALQKLSS 694
>12_01_1046 -
10756062-10756326,10757618-10757782,10757901-10758206,
10758279-10758377,10760555-10760670,10760756-10760848,
10760946-10761107,10761784-10762170
Length = 530
Score = 31.5 bits (68), Expect = 0.68
Identities = 28/85 (32%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Frame = -3
Query: 525 PRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPR-------RHRGRRQPAPLATHHRPD 367
PRAG H RR A R P A APR G P+P A R D
Sbjct: 12 PRAGAHHPRRPNPATGLLRLRLPAPPRRRARAAPRLAVSASSAGAGAASPSPAAGWGRSD 71
Query: 366 RHVLLHRTQARAGRASDERVP-RVP 295
L R A +G A+ P R P
Sbjct: 72 AASSLERCLAASGSAAPASAPTRAP 96
>04_04_0674 +
27173948-27174188,27174704-27175260,27175310-27175399,
27175475-27175714,27175801-27176022,27176124-27176433,
27176528-27176847,27176906-27177021,27177133-27177227,
27177331-27177407,27177520-27177615
Length = 787
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/67 (31%), Positives = 26/67 (38%)
Frame = -3
Query: 564 PRHVLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLA 385
P +L+P R PP +R + RR PD P P R RR PAP+
Sbjct: 499 PPRLLRPDVSRLPPPVRSRPLKRPVD-IRDRRPVMSIPDRVRRLPPPERSYDRRPPAPVY 557
Query: 384 THHRPDR 364
P R
Sbjct: 558 PKRSPRR 564
>02_03_0068 + 14711891-14712418
Length = 175
Score = 31.1 bits (67), Expect = 0.90
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Frame = -3
Query: 561 RHVLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLAT 382
R Q RR R G ++ ++ RR+ +G P +A+ RR GRR A ++
Sbjct: 57 RGARQREEERRAIRGGGEEEKEEEEESPGRRRRNGSPPQEEAQ---RRRCGRRGGAASSS 113
Query: 381 HHRPDRHVLLHRTQA-----RAGRASDERVPRVPDERRTHFRRRHLLAKRE 244
P R LL +A + A + R D R RRR +RE
Sbjct: 114 PPTPRRRGLLPVDRAADPDPTSAAAVSSVIDRRGDGRIRLSRRRGRQGRRE 164
>05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111
Length = 677
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 438 AEPAPRRHRGRRQPAPLATHHRPDRHVLLHRTQARAGR 325
A P PRR R P P AT R HRT R GR
Sbjct: 2 ARPRPRRPAPARSPDPAATTPRQAAPGSRHRTPRRGGR 39
>05_05_0132 -
22611030-22611908,22612016-22612135,22612644-22612856,
22612968-22613288,22613421-22613504
Length = 538
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/75 (34%), Positives = 30/75 (40%)
Frame = -3
Query: 507 HQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLHRTQARAG 328
H A A R A GG + +P PRR GRR+P A H P + A
Sbjct: 369 HDEPAAGAAAELRAARGG----ERQPGPRRE-GRRRPPLAAAHDEP-------AVRGAAE 416
Query: 327 RASDERVPRVPDERR 283
A R R P ERR
Sbjct: 417 EAEPRRRRRRPGERR 431
>03_06_0539 - 34600323-34601273
Length = 316
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -3
Query: 546 PSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPA--PRRHR-GRRQPAPL 388
P AV R + +RKAD G DH +A P+ PR+ G QPA L
Sbjct: 174 PRAVCAEARTAAAAKSADSPCSGSKRKADDGADHPEAPPSARPRQEEAGSEQPAIL 229
>03_06_0534 + 34570080-34571030
Length = 316
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -3
Query: 546 PSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPA--PRRHR-GRRQPAPL 388
P AV R + +RKAD G DH +A P+ PR+ G QPA L
Sbjct: 174 PRAVCAEARTAAAAKSADSPCSGSKRKADDGADHPEAPPSARPRQEEAGSEQPAIL 229
>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3
Query: 540 AVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRR 403
A+ R G R + RRR + G + H A AP HRGRR
Sbjct: 1322 ALVRVAATGGELLRAARSPHGRRRGGEPGGEPHLAPGAPHHHRGRR 1367
>07_01_0769 +
5908942-5908946,5909085-5909666,5910370-5910429,
5910635-5910674,5910767-5910860,5911582-5911952
Length = 383
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = -3
Query: 504 QRRTQKAMARRRKADGGPDHHDAEPAPRRHR-----GRRQPAPLATHHRPDRHVLLHRTQ 340
++R + ++ K D H E +R R R H+ D+ + R Q
Sbjct: 41 EKRRRVGNDQKVKVDDREQHWCEERGEKRRRVGHGQQRSHQRDQERSHQHDQERSVERDQ 100
Query: 339 ARAGRASDE-RVPRVPDERRTHFRRRHLLAKRELHR 235
R+ + E V R D+ R+H R RH KR+ HR
Sbjct: 101 ERSHQRDQEGSVER--DQERSHQRDRHRSVKRDQHR 134
>05_04_0175 - 18742156-18743592
Length = 478
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 357 LLHRTQARAGRASDERVPRVPDERRTHFRRRHL-LAKRELHRRGHPQGH 214
L H R G+A++E DE H + L A+R HR+ H GH
Sbjct: 72 LEHDVVVRHGQAAEEEEEEEEDEELYHHDSQDLGAARRRHHRQHHQDGH 120
>04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814
Length = 775
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 474 RRKADGGPDHHDAEPA-PRRHRGRRQPAPLATHHRPD 367
RR++ HH A P+ P HR RR P HH D
Sbjct: 26 RRRSPSPRRHHRAPPSNPNPHRDRRTPDRPRRHHHED 62
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Frame = -3
Query: 567 GPRHVLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGGP------DHHDAEPAPRRHRGR 406
G H + P A PP+ +RR A A R+ G P H A P P++ +
Sbjct: 151 GSNHAVVPDA---PPQEPAKRRRRNTAAAATARRGRGRPRGATASSAHSAPPPPQQQQQP 207
Query: 405 RQPAPLATHHRPD 367
AP T R D
Sbjct: 208 TTSAPAITAQRND 220
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 321 TLDLLGLESGEAEHADLVGDVLPGVRVAGALDAGAELAP 437
TLD LGL G LP + V G LD G+ AP
Sbjct: 581 TLDFLGLGIGGTMGGSTANGGLPALMVGGELDMGSAQAP 619
>07_03_0909 + 22512313-22512474,22513151-22513465,22513539-22516633,
22516812-22516910,22517031-22517379
Length = 1339
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 381 VLPGVRVAGALDAGAELAPHRDDPVRHLLYVSEP-LLFEFGVGEYLLHEAGAV 536
V+ + + G DA +L P ++ ++HLL+++EP +F +G Y L+ + V
Sbjct: 864 VIRELELLGVDDARRKLYPSAEESLKHLLWLTEPEAVFNAALGLYDLNLSAIV 916
>05_02_0092 - 6522057-6523502
Length = 481
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/72 (33%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 435 EPAPRRHRGRRQPAPLATHHRPDRHVLLHRTQARAGRASDE-RVPRVPDERRTHFRRRHL 259
+PA PA LA H RH LL + AG+ E R ER L
Sbjct: 138 DPAAAAKSAAAGPAALAAHADEQRH-LLRTYEITAGKLGRELRARDAEAERARAALADDL 196
Query: 258 LAKRELHRRGHP 223
A R L R HP
Sbjct: 197 RAARALEERAHP 208
>03_06_0622 - 35151980-35152492
Length = 170
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -3
Query: 537 VRRPPRAGDTHQRRTQ-KAMARRRKADGGPDHHDAEPAPRRHR 412
V R PRA R K +RKAD G DH +A P R R
Sbjct: 22 VYRSPRAVCAEARTAAAKCSGSKRKADDGVDHPEAPPPSARPR 64
>06_01_0268 +
1989069-1989293,1989938-1990020,1990136-1990357,
1990434-1990621,1990711-1990835,1990988-1991039,
1991585-1991874,1992229-1992307,1992527-1992657
Length = 464
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 337 GLSPVKQNMPIWSVMCCQGCGLPAP--SMPA 423
G P + P+W GCGL AP S+PA
Sbjct: 347 GCKPADPHHPMWEAALVDGCGLEAPFLSVPA 377
>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/70 (28%), Positives = 25/70 (35%)
Frame = -3
Query: 528 PPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLH 349
PP + D H RR+ + K D +D P P P P A+ H H
Sbjct: 860 PPASPDRHSRRSPHRSSGSGKKRSSSDRYDDLPLP-------PPPPPASRHEAAEHAHAK 912
Query: 348 RTQARAGRAS 319
T A A S
Sbjct: 913 NTAAAADARS 922
>08_02_0279 -
15249361-15249612,15251270-15251506,15252704-15252772,
15252845-15252895,15254009-15254056,15254187-15254267,
15256219-15256257,15256486-15256551,15258113-15258236,
15258576-15258696,15258771-15258900,15259692-15259853
Length = 459
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 306 PRVPDERRTHFRRRHLLAKRELHRRGHPQGHLINRI 199
PR PD + + L +REL RR H G L R+
Sbjct: 342 PRFPDNKLSAVPPLRLKRERELKRRPHQNGWLFKRV 377
>08_01_0955 + 9478018-9478773
Length = 251
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 541 RCTAPASCRRYSPTPNSKSN 482
RC P+ CRR +P P+S N
Sbjct: 111 RCRCPSRCRRAAPPPSSSKN 130
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 29.1 bits (62), Expect = 3.6
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Frame = -3
Query: 555 VLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRR-----HRGRRQPAP 391
VLQP V RPP+A + +A+A R A G P+H PA G++ +P
Sbjct: 143 VLQPGNVVRPPQASIAN--TPAQAIAPRAPAGGVPNH--TVPATTGLSTDWFNGKKSASP 198
Query: 390 L-ATHHRPDRHVLLHRTQARAGRASDERVP 304
L T P R V A AG + P
Sbjct: 199 LGVTSQTPTRGVSPQVNLATAGIPTQSSTP 228
>04_04_0028 -
22243272-22243577,22244564-22244713,22244919-22245656,
22247233-22247331,22247541-22247933,22248806-22248961
Length = 613
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -3
Query: 327 RASDERVPRVPDERRTHFRRRHLLAKRELHRR--GHPQGHLINRIH 196
R SD +P PDE R H RRR ++R + G L N +H
Sbjct: 132 RRSDRLLPAWPDEARGHGRRRDECSRRGMTDAGVGRETSELANSMH 177
>03_02_0996 -
13082540-13082818,13083107-13083221,13084135-13084235,
13084890-13085117,13085789-13086106,13086200-13086484,
13086566-13086913
Length = 557
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -3
Query: 558 HVLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLA 385
+ +PS++ P + + +R + ARR +A GG + A+ R R R PAP A
Sbjct: 400 YACEPSSLPAYPPSKEMDAKRRDEE-ARRLRAAGGRTNDGAKKTKTRDRPRAVPAPEA 456
>02_02_0419 - 10009686-10012568
Length = 960
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 286 SFVRYTWNSFVRRSTCSGLSPVKQNMPIWSVMCCQGCGL-PAPSMPARS 429
S + Y S V + G + V N+P V+ CGL APS PAR+
Sbjct: 194 SSLEYLDMSVVNLNASVGWAGVVSNLPSLRVLALSDCGLTAAPSPPARA 242
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = -3
Query: 534 RRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAP-----LATHHRP 370
RRP R D + ++ RRR D + D RRHR R + + HR
Sbjct: 103 RRPSRVSDDDKEGGRRR--RRRSTDSDDERGDRHR--RRHRRRSPSSESSDGGRSRRHRR 158
Query: 369 DRHVLLHRTQARAGRASDERVPRVPDER 286
D R + R R E R PD +
Sbjct: 159 DESSRRQRDERRRDRGGREERRRSPDRK 186
>05_07_0191 - 28303642-28303952,28304044-28304149,28304926-28305654
Length = 381
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 393 PLATHHRPDRHVLLHRTQARAGR 325
PL+T H+PDR L R +A GR
Sbjct: 237 PLSTDHKPDRPDELERVEAAGGR 259
>05_05_0089 -
22305727-22306115,22306206-22306311,22306386-22306730,
22306847-22307257
Length = 416
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 399 PAPLATHHRPDRHVLLHRTQARAGR 325
P PL+ H+PDR L R +A GR
Sbjct: 244 PVPLSVDHKPDRPDELERIKAAGGR 268
>02_03_0064 + 14607975-14608925
Length = 316
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -3
Query: 459 GGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLHRTQARAGRASDERVPRVPD--ER 286
GGPD +E A RR RGR P + ++P +++ R A R V D E
Sbjct: 85 GGPDGAGSESATRRPRGR----PAGSKNKPKPPIIITRDSANTLRTHVMEVAGGCDISES 140
Query: 285 RTHFRRR 265
T F RR
Sbjct: 141 ITTFARR 147
>02_02_0424 +
10074206-10074287,10074389-10074485,10074584-10074651,
10074727-10074859,10075102-10075137,10076109-10076208,
10076312-10076424,10076511-10076604,10077301-10077454,
10077563-10077706,10077802-10077875,10077949-10078037,
10078311-10078365,10078563-10078616
Length = 430
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +1
Query: 271 TEMRPSFVRYTWNSFVRRSTCSGL-------SPVKQNMPIWSVMCCQGCGLPA 408
TE+ P VR T+ SFV+ +TC G+ +PVK ++ W +C +PA
Sbjct: 171 TEVSPPSVRGTYGSFVQIATCLGIVVSLLIGTPVK-DIDRWWRVCFWVAAVPA 222
>12_02_0811 -
23370455-23370472,23372279-23372538,23372645-23372713,
23372979-23373105,23373187-23373422,23373509-23373678,
23373855-23373935,23374013-23374084,23374273-23374344,
23374450-23374588,23375141-23375643,23376817-23377010,
23377952-23378488
Length = 825
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 530 ARLVQEILTNAELKKQWLGD 471
A+ + EI N ELKK W+GD
Sbjct: 412 AKAMMEIRDNYELKKNWMGD 431
>10_08_0912 -
21520088-21520426,21520534-21520674,21521235-21521294,
21521394-21521493,21521591-21521904,21522253-21522621,
21522993-21523104,21523627-21523787
Length = 531
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 459 GGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLHRTQARAGRASDER 310
GG + + +PR+H A L H R R + L+ Q R+ R +R
Sbjct: 23 GGGGKNGGDASPRKHAAAAAAAALPRHRRSKRQLQLNLHQERSIRIMLDR 72
>08_01_1000 +
10154024-10154147,10155500-10155761,10155839-10155885,
10155967-10155998,10156079-10156146,10156214-10156605,
10156811-10157009,10157494-10157636,10157722-10158366,
10158493-10158551,10158725-10158823
Length = 689
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = -3
Query: 513 DTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQP-----APLATHHRPDRHVLLH 349
DTH Q + D P+H + APR G+ +P +P+ +P+ +
Sbjct: 462 DTHDH--QLSPKSPGNTDAQPEHQFNQQAPRNSDGQPEPELNPKSPVNAEAQPESQINPQ 519
Query: 348 RTQARAGRASDERVPRVPDERRT-HF 274
+ G+ E P+ P E T HF
Sbjct: 520 SPRNADGQPEPELNPKSPGEAGTSHF 545
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Frame = -3
Query: 429 APRRHR----GRRQPAPLATHHRPDRHVLLHRTQARAGRASDERVPRVPDERRTHFRRRH 262
+PRR R G+ P H DR LH + G + R P +R H RR+
Sbjct: 163 SPRRRRSPSYGKSGPPSHWGSHGADREERLHSRRDGRGYSRSPRRHDSPSNQRNHSPRRY 222
Query: 261 LLAKRE 244
L E
Sbjct: 223 ALPSNE 228
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -3
Query: 483 MARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLHRTQARAG-RASDERV 307
+ RR + D HD + HR HH+ RH H+ Q R G R D RV
Sbjct: 117 LVRRWRPRDHRDQHDHQSQRHHHRHH--------HHQRQRHHHHHQRQQRRGSRTRDPRV 168
Query: 306 PRVP 295
R P
Sbjct: 169 RRGP 172
>04_01_0363 + 4754650-4755912
Length = 420
Score = 28.3 bits (60), Expect = 6.4
Identities = 32/85 (37%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Frame = -3
Query: 522 RAGDTHQRRTQKAMARRRKADGGP------DHHDAEPAPRRHRGRRQPAPLATH--HRP- 370
+AG T QRRT R GGP D D A R R R A L T+ RP
Sbjct: 18 QAGPTRQRRTGGRSTVDRDHVGGPPPVHGIDGPDRPGADRTVRRRPGSARLGTNPAGRPW 77
Query: 369 --DRHVLLH-RTQARAGRASDERVP 304
RHV +H R QA A A+ + P
Sbjct: 78 QGRRHVRVHRRRQAAAQTAAADGAP 102
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = -3
Query: 528 PPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLH 349
PP A H T A A A GG H P R +R P + HRP+
Sbjct: 73 PPPASHNHTATTTTAAA----AAGG--HRKPRPTTSRSHKKRHPPAGSHPHRPNATASPD 126
Query: 348 RTQARAGRASDERVPRVPD 292
T A A A + P P+
Sbjct: 127 STPANADHAVQSK-PAEPE 144
>02_03_0131 - 15576422-15577021
Length = 199
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/76 (27%), Positives = 29/76 (38%)
Frame = -3
Query: 522 RAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLHRT 343
R D +RR ++ R R H + HRGR P+P A H+ R
Sbjct: 49 RDRDRERRRGERDRKRSRSPSADRSHRRHSHS-HSHRGRSSPSPDAGRHKRRRD---GSP 104
Query: 342 QARAGRASDERVPRVP 295
A A D++ P P
Sbjct: 105 AAAATDHKDDKKPEAP 120
>02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467
Length = 421
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 504 QRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLA 385
Q R + A+ R+ + G P H PR HR + P PLA
Sbjct: 174 QGRFKYALFRKPRFLGHPVHRHRARVPRAHRVLQLPPPLA 213
>12_02_0640 - 21447470-21448309
Length = 279
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 561 RHVLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLAT 382
RH + +A PP T +++ Q + RR A P P+P R R R P P +
Sbjct: 181 RHAAKRAAAVMPPPT--TKKKKPQSS--RRPPARTPPPERRESPSPPRGRPRTPPPPPGS 236
Query: 381 HHRP 370
+P
Sbjct: 237 PKKP 240
>12_02_0635 - 21430245-21431156
Length = 303
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 561 RHVLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLAT 382
RH + +A PP T +++ Q + RR A P P+P R R R P P +
Sbjct: 178 RHAAKRAAAVMPPPT--TKKKKPQSS--RRPPARTPPPERRESPSPPRGRPRTPPPPPGS 233
Query: 381 HHRP 370
+P
Sbjct: 234 PKKP 237
>05_03_0127 + 8744716-8744970
Length = 84
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +1
Query: 385 CQGCGLPAPSMPARSWLRIVMIRSAICFTSPSHCFLSSALVSIS 516
C G AP+ P R WLR ++ + T + S V +S
Sbjct: 13 CMGAVARAPAGPRRQWLRAAVVALCVALTGLVQLQIYSPAVPLS 56
>03_02_0283 -
7078754-7078856,7079358-7079431,7079995-7080090,
7080145-7080270,7080856-7080939,7081458-7081506,
7081630-7081688,7081908-7081925,7082141-7082620
Length = 362
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 592 LAAVASSPHRKVRAPARSPYRPMFLAK 672
LAA ASSP R +PA +P P F +
Sbjct: 32 LAAAASSPRRAAASPAPAPPPPPFTGR 58
>03_02_0076 -
5451137-5452503,5453439-5453866,5453949-5454046,
5454723-5454836,5455017-5455111,5455222-5455283,
5455398-5455557,5456247-5456643
Length = 906
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 432 PAPRRHRGRRQPAPLATHHRPDRHVLLH 349
PAPR RG R+ HHR DR + H
Sbjct: 872 PAPRGGRGGRRGGGRDNHHRRDRAMKKH 899
>03_01_0115 -
915142-915321,915397-915631,916301-916386,916474-916590,
917271-917591,918386-918772
Length = 441
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3
Query: 270 RRHLLAKRELHRRGHPQGHLINRIHAPTDVSIY 172
+++ LA R+ GH G+ + + AP DV++Y
Sbjct: 228 KKYKLAARKFVETGHELGNNYSEVIAPQDVAVY 260
>02_02_0159 + 7299685-7300572
Length = 295
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 447 HHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLHRTQARAGRASDERVPRVPDERR 283
H A AP RHRGR +P A + + Q + R +DE + R ++ R
Sbjct: 213 HSPAPAAPSRHRGRTTDSPFAASNGDEAG---GGAQQQVDRKADEFIRRFYEQLR 264
>01_03_0184 + 13560830-13562981,13563604-13564088
Length = 878
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 456 GPDHHDAEPAPRRHRGRRQP 397
GP H P P+RH GR P
Sbjct: 837 GPRRHPVSPLPQRHTGRAGP 856
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,132,984
Number of Sequences: 37544
Number of extensions: 368236
Number of successful extensions: 1698
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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