Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b07f
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   1.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   1.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.6  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   4.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.8  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 231 DVILGITEAYKKDTHPKKVNLGVGAY 308
           +V  GI     +   P K+NLG+G+Y
Sbjct: 240 NVAAGIQYWLDEGAPPSKINLGLGSY 265


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 231 DVILGITEAYKKDTHPKKVNLGVGAY 308
           +V  GI     +   P K+NLG+G+Y
Sbjct: 240 NVAAGIQYWLDEGAPPSKINLGLGSY 265


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 231 DVILGITEAYKKDTHPKKVNLGVGAY 308
           +V  GI     +   P K+NLG+G Y
Sbjct: 239 NVAAGIQYWLDEGAPPSKINLGLGTY 264


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 166 IVSTLLGLSTWVVNFFNT*AIFTKLSNTGKIITN 65
           I S+ L ++TW +   +  AI +KL   GK+ T+
Sbjct: 491 IKSSFLDINTWKMLVKSFDAIDSKLQTGGKVETS 524


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 447 KQV*LQHQYMWPHH 406
           ++V LQH + +PHH
Sbjct: 123 EEVKLQHLHQFPHH 136


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +3

Query: 315 DEGKPFVLPSVRKAEEILHSRGLNHEYAPISG 410
           D+GK F   S  K   I      NH+   I G
Sbjct: 253 DQGKKFAYNSTVKVAVIYGGTSTNHQRGRILG 284


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 71  YNLASVGQFCENGSSV 118
           YN +SV  F E+ SSV
Sbjct: 47  YNTSSVSNFNESSSSV 62


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 71  YNLASVGQFCENGSSV 118
           YN +SV  F E+ SSV
Sbjct: 47  YNTSSVSNFNESSSSV 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,625
Number of Sequences: 336
Number of extensions: 3427
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)