BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11b07f (590 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_0786 - 31992357-31992441,31992632-31992752,31993371-319934... 132 3e-31 06_03_0398 - 20379748-20379820,20379930-20380024,20380127-203802... 124 7e-29 02_02_0198 + 7705868-7706065,7706955-7707052,7707269-7707374,770... 38 0.008 07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 29 2.8 01_06_1021 - 33883594-33884583 29 2.8 05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583 29 3.7 06_02_0148 - 12280794-12280962,12281102-12281210,12281283-122813... 28 4.8 02_05_0895 - 32593155-32593190,32594228-32594279,32594544-325945... 28 4.8 11_03_0088 - 9780355-9780558,9780636-9780725,9783905-9784073,978... 28 6.4 08_02_0984 + 23294646-23294677,23294805-23294892,23295450-23296226 27 8.5 08_01_0688 - 6072815-6073918 27 8.5 02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 27 8.5 02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 27 8.5 01_07_0047 + 40731508-40731714,40731834-40731893,40731992-407321... 27 8.5 >01_06_0786 - 31992357-31992441,31992632-31992752,31993371-31993465, 31993595-31993716,31994217-31994354,31994564-31994727, 31994835-31994955,31995049-31995148,31995329-31995412, 31996082-31996143,31996246-31996317,31996447-31996506 Length = 407 Score = 132 bits (318), Expect = 3e-31 Identities = 69/135 (51%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Frame = +3 Query: 189 ASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEIL 368 ASS+ + + P D ILG+T AY KD P KVNLGVGAYR +EGKP VL VR+AE++L Sbjct: 2 ASSSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQML 61 Query: 369 -HSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFIT 545 ++ EY PI+G A + AKL FG DSP I+ TVQ LSGTG+LR+G EF+ Sbjct: 62 INNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLA 121 Query: 546 KHYAKAKEIWLPTPT 590 +HY + + I++P PT Sbjct: 122 RHYHE-RTIYIPQPT 135 >06_03_0398 - 20379748-20379820,20379930-20380024,20380127-20380222, 20380342-20380501,20380844-20381016,20381102-20381206, 20381460-20381565,20381741-20381947,20383478-20383563, 20383655-20383846 Length = 430 Score = 124 bits (298), Expect = 7e-29 Identities = 62/142 (43%), Positives = 88/142 (61%) Frame = +3 Query: 165 IVGCTGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPS 344 ++G R+ ++W+ +V+ D ILG+TEA+ D P KVN+GVGAYRDD GKP VL Sbjct: 20 LMGAVAARSMASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLEC 79 Query: 345 VRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALR 524 VR+AE + + +N EY P+ G + KLA+GE+ IK++ VQ LSGTGA R Sbjct: 80 VREAERRI-AGSMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACR 138 Query: 525 LGLEFITKHYAKAKEIWLPTPT 590 L +F K + +I++PTPT Sbjct: 139 LFADF-QKRFLPDSQIYIPTPT 159 >02_02_0198 + 7705868-7706065,7706955-7707052,7707269-7707374, 7707636-7707740,7707823-7707995,7708435-7708594, 7708683-7708778,7709349-7709417,7709434-7709528, 7709615-7709687 Length = 390 Score = 37.5 bits (83), Expect = 0.008 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = +3 Query: 186 RASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGV 299 RA ++ + +V+ D ILG+TEA+ D P KVN+GV Sbjct: 29 RAMASLFGHVEPASKDPILGVTEAFLADPSPDKVNVGV 66 Score = 29.9 bits (64), Expect = 1.6 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +3 Query: 501 LSGTGALRLGLEFITKHYAKAKEIWLPTPT 590 LSGTGA RL +F + + +I++PTPT Sbjct: 68 LSGTGACRLFADF-QRRFLPNSQIYIPTPT 96 >07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298, 3895929-3896167,3896524-3896610,3896967-3897066, 3897908-3898115,3898224-3899422 Length = 1442 Score = 29.1 bits (62), Expect = 2.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -3 Query: 291 DLLF*DVCPSCMLL*CLRLHLADPSEHCSTRCC 193 DLL D CPS L CL + + HCS+ C Sbjct: 743 DLLCCDNCPSTFHLACLGIKMPSGDWHCSSCIC 775 >01_06_1021 - 33883594-33884583 Length = 329 Score = 29.1 bits (62), Expect = 2.8 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = -2 Query: 484 LLLFLMTGLSSPKASLATASVYVASP--LMGAYSWLSPLL*RISSAFL 347 +LLF ++ LS+ A AS+Y A P + + + L P+L R+ FL Sbjct: 87 ILLFTLSLLSTAAAVFTVASLYAAKPASIASSLAALPPILPRLLRTFL 134 >05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583 Length = 602 Score = 28.7 bits (61), Expect = 3.7 Identities = 20/66 (30%), Positives = 31/66 (46%) Frame = -2 Query: 325 FPSSSLYAPTPRFTFLGCVSFLYASVMPKITSGGPI*TLFHQVLLALRPVQPTIVSTLLG 146 FPS S A + ++LG + LY ++ K+ G +V L L V P +V+ + Sbjct: 171 FPSDSRVAVSLATSYLGLSAKLYTTMAEKMPRGATARYSKEKVYLLLNAVVPMLVTLVAA 230 Query: 145 LSTWVV 128 S VV Sbjct: 231 PSLRVV 236 >06_02_0148 - 12280794-12280962,12281102-12281210,12281283-12281385, 12281587-12281618,12281709-12281926,12282035-12282150, 12282428-12282683,12282912-12282999,12283393-12283468, 12283562-12283620,12285236-12285305,12285399-12285539 Length = 478 Score = 28.3 bits (60), Expect = 4.8 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +3 Query: 231 DVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILH 371 D+ + YK+D K LG+ AYR P +LPSV + H Sbjct: 80 DIAIDSYHRYKEDVGIMK-GLGLNAYRFSVSWPRILPSVEPFVTLFH 125 >02_05_0895 - 32593155-32593190,32594228-32594279,32594544-32594584, 32594795-32594906,32595195-32595268,32595349-32595587, 32595710-32596678,32596725-32596878,32596957-32597244, 32597393-32597534,32598679-32598752,32598870-32598890 Length = 733 Score = 28.3 bits (60), Expect = 4.8 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 Query: 84 VLDSFVKMAQVLKKLTTQVLKPNNVDTIVGCTGLRASSTWWNNV 215 V DSFV + VL++ + + V + G TGL + +T W ++ Sbjct: 579 VADSFVDIVGVLRETWSTLSSLYQVGSASGSTGLASETTIWGSL 622 >11_03_0088 - 9780355-9780558,9780636-9780725,9783905-9784073, 9784230-9784638,9784725-9785562 Length = 569 Score = 27.9 bits (59), Expect = 6.4 Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 1/132 (0%) Frame = -2 Query: 514 PVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RISSAFLTEGK 335 P+P + TV + TGL P + + V S LSPL + F + Sbjct: 60 PLPRDGRTVVFAAYFATGLRLPCDNFLPS---VLSMYEVRLPQLSPLAFPKLALFAWMCR 116 Query: 334 TNGF-PSSSLYAPTPRFTFLGCVSFLYASVMPKITSGGPI*TLFHQVLLALRPVQPTIVS 158 T GF P++ L+A F C AS T GP T+F V LRP + Sbjct: 117 TCGFAPTAELFAAL----FTAC-----ASTKDVQTPAGPRKTIFSCVNFMLRPERSDAWP 167 Query: 157 TLLGLSTWVVNF 122 L ++ W N+ Sbjct: 168 VLASMAKWDRNW 179 >08_02_0984 + 23294646-23294677,23294805-23294892,23295450-23296226 Length = 298 Score = 27.5 bits (58), Expect = 8.5 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +3 Query: 240 LGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLNHEY 395 +G T + D H K +N+ Y+DD PF+L + K L L +E+ Sbjct: 142 VGKTRGVRDDGHFKSINIQSFWYKDD---PFILATQSKKIFYLQDTSLGNEW 190 >08_01_0688 - 6072815-6073918 Length = 367 Score = 27.5 bits (58), Expect = 8.5 Identities = 22/70 (31%), Positives = 32/70 (45%) Frame = +3 Query: 192 SSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILH 371 +S WW++ +M + TEA+KK TH + GV A + E + + R E LH Sbjct: 109 ASEWWDHFRMNRAEGHPKFTEAFKK-TH---IPAGVVALKKREFRA-LKQKDRTVTEYLH 163 Query: 372 SRGLNHEYAP 401 YAP Sbjct: 164 EFNRLARYAP 173 >02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 Length = 1439 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Frame = +3 Query: 438 KLAFGEDSPVIKNRSN-----CTVQTLSGTGALRLGLEFITKHYA 557 KLA G ++N +N C + GTG RL + F+ ++A Sbjct: 896 KLAGGTSIEQLRNNANTIEGGCVISHAPGTGKTRLAITFVQSYFA 940 >02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514, 1438627-1438696,1439264-1439407,1439771-1439837, 1439970-1440019,1440386-1440559,1440881-1440934, 1441008-1441112 Length = 330 Score = 27.5 bits (58), Expect = 8.5 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 324 KPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVI 470 KP L ++ K E+LH G YA + A+ +L+ G VI Sbjct: 233 KPIKLGTIAKGAELLHQEGAREVYACCTHAVFSPPAIERLSSGLFQEVI 281 >01_07_0047 + 40731508-40731714,40731834-40731893,40731992-40732159, 40732198-40732203,40732898-40732961,40733395-40733690, 40733799-40733903,40734030-40734066,40734309-40734403, 40735226-40735282,40735361-40735438,40735527-40735586 Length = 410 Score = 27.5 bits (58), Expect = 8.5 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +3 Query: 330 FVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDS 461 +V S ++ EILH RG+ E + +AT +D A+ F E + Sbjct: 97 YVERSAKQTTEILHRRGMELEAQVEAMKATISDLEAEAKFFEST 140 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,540,939 Number of Sequences: 37544 Number of extensions: 352615 Number of successful extensions: 839 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 837 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1400060088 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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