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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b07f
         (590 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0786 - 31992357-31992441,31992632-31992752,31993371-319934...   132   3e-31
06_03_0398 - 20379748-20379820,20379930-20380024,20380127-203802...   124   7e-29
02_02_0198 + 7705868-7706065,7706955-7707052,7707269-7707374,770...    38   0.008
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389...    29   2.8  
01_06_1021 - 33883594-33884583                                         29   2.8  
05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583     29   3.7  
06_02_0148 - 12280794-12280962,12281102-12281210,12281283-122813...    28   4.8  
02_05_0895 - 32593155-32593190,32594228-32594279,32594544-325945...    28   4.8  
11_03_0088 - 9780355-9780558,9780636-9780725,9783905-9784073,978...    28   6.4  
08_02_0984 + 23294646-23294677,23294805-23294892,23295450-23296226     27   8.5  
08_01_0688 - 6072815-6073918                                           27   8.5  
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783     27   8.5  
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143...    27   8.5  
01_07_0047 + 40731508-40731714,40731834-40731893,40731992-407321...    27   8.5  

>01_06_0786 -
           31992357-31992441,31992632-31992752,31993371-31993465,
           31993595-31993716,31994217-31994354,31994564-31994727,
           31994835-31994955,31995049-31995148,31995329-31995412,
           31996082-31996143,31996246-31996317,31996447-31996506
          Length = 407

 Score =  132 bits (318), Expect = 3e-31
 Identities = 69/135 (51%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
 Frame = +3

Query: 189 ASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEIL 368
           ASS+ +  +   P D ILG+T AY KD  P KVNLGVGAYR +EGKP VL  VR+AE++L
Sbjct: 2   ASSSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQML 61

Query: 369 -HSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFIT 545
            ++     EY PI+G A +    AKL FG DSP I+     TVQ LSGTG+LR+G EF+ 
Sbjct: 62  INNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLA 121

Query: 546 KHYAKAKEIWLPTPT 590
           +HY + + I++P PT
Sbjct: 122 RHYHE-RTIYIPQPT 135


>06_03_0398 -
           20379748-20379820,20379930-20380024,20380127-20380222,
           20380342-20380501,20380844-20381016,20381102-20381206,
           20381460-20381565,20381741-20381947,20383478-20383563,
           20383655-20383846
          Length = 430

 Score =  124 bits (298), Expect = 7e-29
 Identities = 62/142 (43%), Positives = 88/142 (61%)
 Frame = +3

Query: 165 IVGCTGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPS 344
           ++G    R+ ++W+ +V+    D ILG+TEA+  D  P KVN+GVGAYRDD GKP VL  
Sbjct: 20  LMGAVAARSMASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLEC 79

Query: 345 VRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALR 524
           VR+AE  + +  +N EY P+ G     +   KLA+GE+   IK++    VQ LSGTGA R
Sbjct: 80  VREAERRI-AGSMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACR 138

Query: 525 LGLEFITKHYAKAKEIWLPTPT 590
           L  +F  K +    +I++PTPT
Sbjct: 139 LFADF-QKRFLPDSQIYIPTPT 159


>02_02_0198 +
           7705868-7706065,7706955-7707052,7707269-7707374,
           7707636-7707740,7707823-7707995,7708435-7708594,
           7708683-7708778,7709349-7709417,7709434-7709528,
           7709615-7709687
          Length = 390

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +3

Query: 186 RASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGV 299
           RA ++ + +V+    D ILG+TEA+  D  P KVN+GV
Sbjct: 29  RAMASLFGHVEPASKDPILGVTEAFLADPSPDKVNVGV 66



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 501 LSGTGALRLGLEFITKHYAKAKEIWLPTPT 590
           LSGTGA RL  +F  + +    +I++PTPT
Sbjct: 68  LSGTGACRLFADF-QRRFLPNSQIYIPTPT 96


>07_01_0524 +
           3892340-3894625,3894995-3895109,3895204-3895298,
           3895929-3896167,3896524-3896610,3896967-3897066,
           3897908-3898115,3898224-3899422
          Length = 1442

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 291 DLLF*DVCPSCMLL*CLRLHLADPSEHCSTRCC 193
           DLL  D CPS   L CL + +     HCS+  C
Sbjct: 743 DLLCCDNCPSTFHLACLGIKMPSGDWHCSSCIC 775


>01_06_1021 - 33883594-33884583
          Length = 329

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 484 LLLFLMTGLSSPKASLATASVYVASP--LMGAYSWLSPLL*RISSAFL 347
           +LLF ++ LS+  A    AS+Y A P  +  + + L P+L R+   FL
Sbjct: 87  ILLFTLSLLSTAAAVFTVASLYAAKPASIASSLAALPPILPRLLRTFL 134


>05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583
          Length = 602

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = -2

Query: 325 FPSSSLYAPTPRFTFLGCVSFLYASVMPKITSGGPI*TLFHQVLLALRPVQPTIVSTLLG 146
           FPS S  A +   ++LG  + LY ++  K+  G        +V L L  V P +V+ +  
Sbjct: 171 FPSDSRVAVSLATSYLGLSAKLYTTMAEKMPRGATARYSKEKVYLLLNAVVPMLVTLVAA 230

Query: 145 LSTWVV 128
            S  VV
Sbjct: 231 PSLRVV 236


>06_02_0148 -
           12280794-12280962,12281102-12281210,12281283-12281385,
           12281587-12281618,12281709-12281926,12282035-12282150,
           12282428-12282683,12282912-12282999,12283393-12283468,
           12283562-12283620,12285236-12285305,12285399-12285539
          Length = 478

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 231 DVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILH 371
           D+ +     YK+D    K  LG+ AYR     P +LPSV     + H
Sbjct: 80  DIAIDSYHRYKEDVGIMK-GLGLNAYRFSVSWPRILPSVEPFVTLFH 125


>02_05_0895 -
           32593155-32593190,32594228-32594279,32594544-32594584,
           32594795-32594906,32595195-32595268,32595349-32595587,
           32595710-32596678,32596725-32596878,32596957-32597244,
           32597393-32597534,32598679-32598752,32598870-32598890
          Length = 733

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 84  VLDSFVKMAQVLKKLTTQVLKPNNVDTIVGCTGLRASSTWWNNV 215
           V DSFV +  VL++  + +     V +  G TGL + +T W ++
Sbjct: 579 VADSFVDIVGVLRETWSTLSSLYQVGSASGSTGLASETTIWGSL 622


>11_03_0088 -
           9780355-9780558,9780636-9780725,9783905-9784073,
           9784230-9784638,9784725-9785562
          Length = 569

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 1/132 (0%)
 Frame = -2

Query: 514 PVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RISSAFLTEGK 335
           P+P +  TV    +  TGL  P  +   +   V S        LSPL     + F    +
Sbjct: 60  PLPRDGRTVVFAAYFATGLRLPCDNFLPS---VLSMYEVRLPQLSPLAFPKLALFAWMCR 116

Query: 334 TNGF-PSSSLYAPTPRFTFLGCVSFLYASVMPKITSGGPI*TLFHQVLLALRPVQPTIVS 158
           T GF P++ L+A      F  C     AS     T  GP  T+F  V   LRP +     
Sbjct: 117 TCGFAPTAELFAAL----FTAC-----ASTKDVQTPAGPRKTIFSCVNFMLRPERSDAWP 167

Query: 157 TLLGLSTWVVNF 122
            L  ++ W  N+
Sbjct: 168 VLASMAKWDRNW 179


>08_02_0984 + 23294646-23294677,23294805-23294892,23295450-23296226
          Length = 298

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 240 LGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLNHEY 395
           +G T   + D H K +N+    Y+DD   PF+L +  K    L    L +E+
Sbjct: 142 VGKTRGVRDDGHFKSINIQSFWYKDD---PFILATQSKKIFYLQDTSLGNEW 190


>08_01_0688 - 6072815-6073918
          Length = 367

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +3

Query: 192 SSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILH 371
           +S WW++ +M   +     TEA+KK TH   +  GV A +  E +  +    R   E LH
Sbjct: 109 ASEWWDHFRMNRAEGHPKFTEAFKK-TH---IPAGVVALKKREFRA-LKQKDRTVTEYLH 163

Query: 372 SRGLNHEYAP 401
                  YAP
Sbjct: 164 EFNRLARYAP 173


>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
          Length = 1439

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = +3

Query: 438  KLAFGEDSPVIKNRSN-----CTVQTLSGTGALRLGLEFITKHYA 557
            KLA G     ++N +N     C +    GTG  RL + F+  ++A
Sbjct: 896  KLAGGTSIEQLRNNANTIEGGCVISHAPGTGKTRLAITFVQSYFA 940


>02_01_0219 -
           1437685-1437723,1437932-1438091,1438385-1438514,
           1438627-1438696,1439264-1439407,1439771-1439837,
           1439970-1440019,1440386-1440559,1440881-1440934,
           1441008-1441112
          Length = 330

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 324 KPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVI 470
           KP  L ++ K  E+LH  G    YA  +       A+ +L+ G    VI
Sbjct: 233 KPIKLGTIAKGAELLHQEGAREVYACCTHAVFSPPAIERLSSGLFQEVI 281


>01_07_0047 +
           40731508-40731714,40731834-40731893,40731992-40732159,
           40732198-40732203,40732898-40732961,40733395-40733690,
           40733799-40733903,40734030-40734066,40734309-40734403,
           40735226-40735282,40735361-40735438,40735527-40735586
          Length = 410

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 330 FVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDS 461
           +V  S ++  EILH RG+  E    + +AT +D  A+  F E +
Sbjct: 97  YVERSAKQTTEILHRRGMELEAQVEAMKATISDLEAEAKFFEST 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,540,939
Number of Sequences: 37544
Number of extensions: 352615
Number of successful extensions: 839
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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