Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11b07f
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 171 2e-43
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 171 2e-43
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 145 2e-35
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 106 1e-23
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 88 5e-18
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 38 0.007
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 38 0.007
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 27 7.5
U53150-1|AAA96123.2| 302|Caenorhabditis elegans Serpentine rece... 27 7.5
U23517-5|AAB93339.2| 425|Caenorhabditis elegans Serpentine rece... 27 7.5
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 27 7.5
AF098985-3|AAC67421.1| 358|Caenorhabditis elegans Hypothetical ... 27 10.0
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 171 bits (417), Expect = 2e-43
Identities = 82/138 (59%), Positives = 107/138 (77%)
Frame = +3
Query: 177 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 356
T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 357 EEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLE 536
E + + L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 537 FITKHYAKAKEIWLPTPT 590
F++K YAK K I+ PTPT
Sbjct: 129 FLSK-YAKTKVIYQPTPT 145
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 171 bits (417), Expect = 2e-43
Identities = 82/138 (59%), Positives = 107/138 (77%)
Frame = +3
Query: 177 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 356
T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 357 EEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLE 536
E + + L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 537 FITKHYAKAKEIWLPTPT 590
F++K YAK K I+ PTPT
Sbjct: 129 FLSK-YAKTKVIYQPTPT 145
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 145 bits (352), Expect = 2e-35
Identities = 67/130 (51%), Positives = 96/130 (73%)
Frame = +3
Query: 201 WWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG 380
W+ NV + P D ILG+TEA+KKDT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ +
Sbjct: 22 WFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK 81
Query: 381 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAK 560
++ EY+ I+G + AKLAFG++S VI++ T Q++SGTGALR+G +F+ K +
Sbjct: 82 MDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK-FIP 140
Query: 561 AKEIWLPTPT 590
+K ++ PTPT
Sbjct: 141 SKTLFYPTPT 150
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 106 bits (255), Expect = 1e-23
Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = +3
Query: 198 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 374
++++ + + PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI +
Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61
Query: 375 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 554
LNHEY P+ G + A +L G +SP IK + VQ LSGTGALR G EF+
Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120
Query: 555 AKAKEIWLPTPT 590
K +++ PT
Sbjct: 121 CNMKTVYVSNPT 132
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 87.8 bits (208), Expect = 5e-18
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = +3
Query: 198 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 374
++++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H
Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63
Query: 375 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 554
NHEY PI G + + L G DS IK + +VQ +SGTGA+ +G EF+ +
Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQ-V 122
Query: 555 AKAKEIWLPTP 587
K I++ P
Sbjct: 123 LSMKTIYVSNP 133
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -2
Query: 538 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 359
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 27 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 84
Query: 358 SAFLTEGKTNGFPSSSLYA 302
S+ T G T+G SSS YA
Sbjct: 85 SSPSTVGSTSGAASSSSYA 103
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -2
Query: 538 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 359
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 234 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 291
Query: 358 SAFLTEGKTNGFPSSSLYA 302
S+ T G T+G SSS YA
Sbjct: 292 SSPSTVGSTSGAASSSSYA 310
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -2
Query: 538 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 359
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 234 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 291
Query: 358 SAFLTEGKTNGFPSSSLYA 302
S+ T G T+G SSS YA
Sbjct: 292 SSPSTVGSTSGAASSSSYA 310
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 493 TVQLLLFLMTGLSSPKASLATASVYVASPLMGAY 392
++Q L+FL + L +L++A V V P MG Y
Sbjct: 3 SLQYLIFLFSSLLFAGLALSSAQVAVNGPFMGRY 36
>U53150-1|AAA96123.2| 302|Caenorhabditis elegans Serpentine
receptor, class sx protein32 protein.
Length = 302
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -2
Query: 202 QVLLALRPVQPTIVSTLLGLSTWVVNFFNT*AIFTKLSNTGKIITNYVVLLKDEECPSSR 23
Q+ + R + T++ ++G S+ V N AIF K + T K+I+ Y + + C S+
Sbjct: 200 QMKVVFRSILWTVIFVIIGWSS--VTIANQFAIFAKDAATRKLISIYAGIGVNLACASNI 257
Query: 22 FL 17
F+
Sbjct: 258 FV 259
>U23517-5|AAB93339.2| 425|Caenorhabditis elegans Serpentine
receptor, class o (opsin)protein 1 protein.
Length = 425
Score = 27.5 bits (58), Expect = 7.5
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Frame = -2
Query: 436 ATASVYVASPLMGAYSWLSPLL*RISSAFLTEGKT-NGFPSSSLYAPTPRFTFLGCVSF- 263
AT V+ P+ A S ++ + S +E + NG P + P+ +G V
Sbjct: 232 ATCLVFFLIPVCIASSLYYSIIDHVDSQNASESQLENGIPKPEVCTWAPK-NHVGKVGLG 290
Query: 262 -LYASVMP----KITSGGPI*TLFHQVLLALRPVQPTIVSTLL 149
L SV+P I P+ + FHQ+ + PV + VSTLL
Sbjct: 291 CLLVSVVPFFAYSIVCLNPMKSNFHQIHYIVIPVIVSRVSTLL 333
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 243 GITEAYKKDTHPKKVNLGVGAYRDDEG 323
GI A +++ HP KV G+G + D G
Sbjct: 910 GIEVAVRRNVHPPKVLTGIGIHSPDGG 936
>AF098985-3|AAC67421.1| 358|Caenorhabditis elegans Hypothetical
protein C08G5.3 protein.
Length = 358
Score = 27.1 bits (57), Expect = 10.0
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +3
Query: 165 IVGCTGLRASSTWWNNVQMGPPDVILGITEAYKKD-----THPKKVNLGVGAYRDDEGKP 329
I+G TG + +TW + Q P + G+ E Y+ HPKK + D+ +
Sbjct: 21 IIGNTGDASLATWRDWAQCQPGKYVHGVEEKYETPKFIIRKHPKKYR--PTSAEDNSEED 78
Query: 330 FVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAK-LAFGEDSPVI 470
+ A+ S N + P GEA A+ K + +G+D V+
Sbjct: 79 NKSDQILSADGPWGSWSGNTTFCP-RGEAIVGFAIMKHIFYGDDRGVV 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,062,865
Number of Sequences: 27780
Number of extensions: 306974
Number of successful extensions: 765
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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