Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11b07f
(590 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondri... 137 4e-33
At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast... 126 1e-29
At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast... 126 1e-29
At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast... 123 1e-28
At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic... 122 1e-28
At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 104 5e-23
At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 101 4e-22
At3g19680.1 68416.m02493 expressed protein 30 1.3
At3g54460.1 68416.m06025 SNF2 domain-containing protein / helica... 29 3.1
At1g70810.1 68414.m08168 C2 domain-containing protein similar to... 28 4.1
At4g39840.1 68417.m05645 expressed protein 28 5.4
At1g79820.2 68414.m09323 hexose transporter, putative similar to... 28 5.4
At1g79820.1 68414.m09322 hexose transporter, putative similar to... 28 5.4
At3g26140.1 68416.m03261 glycosyl hydrolase family 5 protein / c... 27 7.1
>At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondrial
/ transaminase A (ASP1) identical to SP|P46643 Aspartate
aminotransferase, mitochondrial precursor (EC 2.6.1.1)
(Transaminase A) {Arabidopsis thaliana}
Length = 430
Score = 137 bits (332), Expect = 4e-33
Identities = 68/137 (49%), Positives = 91/137 (66%)
Frame = +3
Query: 180 GLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE 359
GLR+ S+WW +V+ P D ILG+TEA+ D P+KVN+GVGAYRDD GKP VL VR+AE
Sbjct: 25 GLRSMSSWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECVREAE 84
Query: 360 EILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEF 539
+ L + EY P+ G A D KLA+G++S IK++ VQTLSGTGA RL +F
Sbjct: 85 KRL-AGSTFMEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADF 143
Query: 540 ITKHYAKAKEIWLPTPT 590
K ++ +I++P PT
Sbjct: 144 -QKRFSPGSQIYIPVPT 159
>At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 126 bits (304), Expect = 1e-29
Identities = 62/129 (48%), Positives = 86/129 (66%)
Frame = +3
Query: 204 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGL 383
+ + M PPD ILG++EA+K DT+ K+NLGVGAYR +E +P+VL V+KAE ++ RG
Sbjct: 53 FEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGD 112
Query: 384 NHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAKA 563
N EY PI G A + A A+L FG PVIK + T+Q LSGTG+LRL I +++ A
Sbjct: 113 NKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGA 172
Query: 564 KEIWLPTPT 590
K + + +PT
Sbjct: 173 KVV-ISSPT 180
>At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 126 bits (304), Expect = 1e-29
Identities = 62/129 (48%), Positives = 86/129 (66%)
Frame = +3
Query: 204 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGL 383
+ + M PPD ILG++EA+K DT+ K+NLGVGAYR +E +P+VL V+KAE ++ RG
Sbjct: 53 FEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGD 112
Query: 384 NHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAKA 563
N EY PI G A + A A+L FG PVIK + T+Q LSGTG+LRL I +++ A
Sbjct: 113 NKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGA 172
Query: 564 KEIWLPTPT 590
K + + +PT
Sbjct: 173 KVV-ISSPT 180
>At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast /
transaminase A (ASP3) (YLS4) identical to SP|P46644
Aspartate aminotransferase, chloroplast precursor (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana};
identical to cDNA YLS4 mRNA for aspartate
aminotransferase (ASP3), partial cds GI:13122285
Length = 449
Score = 123 bits (296), Expect = 1e-28
Identities = 64/130 (49%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Frame = +3
Query: 204 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHSRG 380
++++ P D ILG+T AY KD P K+NLGVGAYR +EGKP VL VRKAE ++++ R
Sbjct: 49 FSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRT 108
Query: 381 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAK 560
EY PI G + AKL G DSP I+ TV+ LSGTG+LR+G EF+ KHY +
Sbjct: 109 RIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHYHQ 168
Query: 561 AKEIWLPTPT 590
K I++ PT
Sbjct: 169 -KTIYITQPT 177
>At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic
isozyme 1 / transaminase A (ASP2) identical to SP|P46645
Aspartate aminotransferase, cytoplasmic isozyme 1 (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana}
Length = 405
Score = 122 bits (295), Expect = 1e-28
Identities = 64/130 (49%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Frame = +3
Query: 204 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHSRG 380
++NV P D ILG+T AY D P K+NLGVGAYR +EGKP VL VRKAE ++++
Sbjct: 5 FSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVNDPS 64
Query: 381 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAK 560
EY PI G + + AKL G DSP I TVQ LSGTG+LR+G EF+ HY +
Sbjct: 65 RVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHYHQ 124
Query: 561 AKEIWLPTPT 590
+ I++P PT
Sbjct: 125 S-VIYIPKPT 133
>At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 403
Score = 104 bits (249), Expect = 5e-23
Identities = 54/128 (42%), Positives = 75/128 (58%)
Frame = +3
Query: 207 NNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLN 386
++V P D +L + A + D P K+NL G YR +EGKP VL VR+AE+ L + L+
Sbjct: 6 SSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQL-ANDLD 64
Query: 387 HEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAKAK 566
EY P++G + KL G+DSP +K T Q LSGTG+LR+G EF+ H K
Sbjct: 65 KEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATH-NKES 123
Query: 567 EIWLPTPT 590
I++P PT
Sbjct: 124 VIFVPNPT 131
>At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 405
Score = 101 bits (242), Expect = 4e-22
Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Frame = +3
Query: 207 NNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEIL-HSRGL 383
++V P D +L + A + D P K+NL G YR +EGKP VL VR+AE+ L +
Sbjct: 6 SSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLANDLSR 65
Query: 384 NHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAKA 563
+ EY P++G + KL G+DSP +K T Q LSGTG+LR+G EF+ H K
Sbjct: 66 DKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATH-NKE 124
Query: 564 KEIWLPTPT 590
I++P PT
Sbjct: 125 SVIFVPNPT 133
>At3g19680.1 68416.m02493 expressed protein
Length = 491
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 572 DLLCLSVVFRYELESESECASAGQCLYSTVAPIF 471
+++ + V+FR E ESE+ C+S+G STVA F
Sbjct: 55 EIVSVPVMFRTESESETRCSSSGN--VSTVAACF 86
>At3g54460.1 68416.m06025 SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein similar
to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces
pombe}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00646: F-box domain
Length = 1378
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 465 VIKNRSNCTVQTLSGTGALRLGLEFITKHYAKAKEIW 575
+ +N ++C + G+GAL L L F+T H + IW
Sbjct: 1238 MFQNDADCMALLMDGSGALGLDLSFVT-HVFLMEPIW 1273
>At1g70810.1 68414.m08168 C2 domain-containing protein similar to
zinc finger and C2 domain protein GI:9957238 from
[Arabidopsis thaliana]
Length = 165
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2
Query: 94 LSNTGKIITNYVVLLKDEEC 35
+SN GKI+ N ++LL++ EC
Sbjct: 128 VSNNGKIVQNMILLLRNVEC 147
>At4g39840.1 68417.m05645 expressed protein
Length = 451
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/94 (25%), Positives = 36/94 (38%)
Frame = +3
Query: 102 KMAQVLKKLTTQVLKPNNVDTIVGCTGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPK 281
K + LKKL + N+ +I L SS+ N + PP L + KK + P
Sbjct: 136 KTSSELKKLNSGTKSTNSTSSIKKSADLSKSSSSKNKTTIKPPSSKLSSPPSEKK-SQPS 194
Query: 282 KVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGL 383
+ + E KPF L + + R L
Sbjct: 195 SKPVTKSKQSEKEIKPFWLDDEEDEDFVSEFRDL 228
>At1g79820.2 68414.m09323 hexose transporter, putative similar to
hexose transporter GI:8347246 from (Solanum tuberosum);
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 495
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = -2
Query: 301 PTPRFTFLGCVSFLYASVMPKITSGGPI*TLFHQVLLALRPVQPTIVSTLLGLSTWVVNF 122
P+P T V + V+ T GP+ +L + R ++ T ++ L + WV+NF
Sbjct: 381 PSPFGTLFLSVGGMLLFVLSFATGAGPVPSLLLSEICPGR-LRATALAVCLAVH-WVINF 438
Query: 121 FNT*AIFTKLSNTGKIITNYV 59
F L G ++ N +
Sbjct: 439 FVGLLFLRMLEQLGSVLLNAI 459
>At1g79820.1 68414.m09322 hexose transporter, putative similar to
hexose transporter GI:8347246 from (Solanum tuberosum);
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 495
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = -2
Query: 301 PTPRFTFLGCVSFLYASVMPKITSGGPI*TLFHQVLLALRPVQPTIVSTLLGLSTWVVNF 122
P+P T V + V+ T GP+ +L + R ++ T ++ L + WV+NF
Sbjct: 381 PSPFGTLFLSVGGMLLFVLSFATGAGPVPSLLLSEICPGR-LRATALAVCLAVH-WVINF 438
Query: 121 FNT*AIFTKLSNTGKIITNYV 59
F L G ++ N +
Sbjct: 439 FVGLLFLRMLEQLGSVLLNAI 459
>At3g26140.1 68416.m03261 glycosyl hydrolase family 5 protein /
cellulase family protein contains Pfam profile: PF00150
cellulase (glycosyl hydrolase family 5)
Length = 508
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = +3
Query: 42 SSFSSTT*LVIILPVLDSFVKMAQVLKKLTTQVLKPNNVDTIVGCTGLRASSTWWNNVQM 221
S F + +I LP+++++ K+ L V+ N+V C G + ++ +
Sbjct: 93 SGFETKNPSMIDLPLIEAYKKVVAKLGNNNVMVILDNHVTKPGWCCGYNDGNGFFGDTFF 152
Query: 222 GPPDVILGITE 254
P I G+T+
Sbjct: 153 DPTTWIAGLTK 163
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,181,431
Number of Sequences: 28952
Number of extensions: 281540
Number of successful extensions: 644
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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