Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11b02r
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.33 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    26   0.33 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.3  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.4  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 581 HNMMTRLLCIMTNEIHIFVT 522
           H++   LLCI+TN + I +T
Sbjct: 277 HDIFLPLLCILTNTLEILIT 296


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 581 HNMMTRLLCIMTNEIHIFVT 522
           H++   LLCI+TN + I +T
Sbjct: 102 HDIFLPLLCILTNTLEILIT 121


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 495 FIMYIFLFFYFDSYRQANELKSIFKTSPRELHFYLM 388
           F++Y+ L      YRQ + L + +K    +  FYL+
Sbjct: 144 FMIYLILDTIKSKYRQMHRLLANYKVITSDEFFYLV 179


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 570 HHIMCHTYYDCAFNRANI 623
           HH  C  Y+ C  N A +
Sbjct: 34  HHTSCDKYWKCDNNVAEL 51


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 570 HHIMCHTYYDCAFNRANI 623
           HH  C  Y+ C  N A +
Sbjct: 34  HHTSCDKYWKCDNNVAEL 51


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 485 TFFYFFTS 462
           TFFYFFT+
Sbjct: 245 TFFYFFTT 252


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 485 TFFYFFTS 462
           TFFYFFT+
Sbjct: 241 TFFYFFTT 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,441
Number of Sequences: 336
Number of extensions: 3578
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)