Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a23f
(618 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 34 0.066
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 31 0.46
At5g15860.2 68418.m01856 expressed protein 31 0.61
At5g15860.1 68418.m01855 expressed protein 31 0.61
At2g37925.1 68415.m04655 copper transporter family protein simil... 31 0.81
At3g48050.2 68416.m05239 bromo-adjacent homology (BAH) domain-co... 30 1.1
At3g48050.1 68416.m05238 bromo-adjacent homology (BAH) domain-co... 30 1.1
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 30 1.4
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 27 1.5
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 29 1.9
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 29 2.5
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 29 2.5
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 29 2.5
At1g61080.1 68414.m06877 proline-rich family protein 29 2.5
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 3.3
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 4.3
At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein si... 28 4.3
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 28 4.3
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 4.3
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 28 5.7
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 5.7
At1g26390.1 68414.m03219 FAD-binding domain-containing protein s... 28 5.7
At1g07440.1 68414.m00794 tropinone reductase, putative / tropine... 28 5.7
At4g21585.1 68417.m03124 bifunctional nuclease, putative similar... 27 7.5
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 27 7.5
At3g55160.1 68416.m06126 expressed protein 27 7.5
At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138... 27 7.5
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 7.5
At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containi... 27 7.5
At4g28680.1 68417.m04098 tyrosine decarboxylase, putative simila... 27 10.0
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 27 10.0
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 27 10.0
At3g24550.1 68416.m03083 protein kinase family protein contains ... 27 10.0
At2g16650.1 68415.m01911 expressed protein 27 10.0
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 34.3 bits (75), Expect = 0.066
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = -1
Query: 615 PPACRPALPTTC------APKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPL-TAVL 457
PP +P LP P L P +T+P LPPP N PTL P+ T +
Sbjct: 49 PPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPV----YNKPTLPAPVYTPPV 104
Query: 456 YRPLARPRQSTTITL 412
Y+P P T TL
Sbjct: 105 YKPTLSPPVYTKPTL 119
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = -1
Query: 594 LPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTIT 415
LP P L P +T+P L P + N P+L P +Y+P P T T
Sbjct: 120 LPPVFKPTLSPPVYTKPTLSPTVYKPTLSPPVNNKPSLSPP----VYKPTLSPPVYTKPT 175
Query: 414 LQSETASKA 388
L K+
Sbjct: 176 LPPPVYKKS 184
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 603 RPAL-PTTCAPKLKPIKWTRPQLPPPL 526
+P+L P P L P +T+P LPPP+
Sbjct: 154 KPSLSPPVYKPTLSPPVYTKPTLPPPV 180
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 31.5 bits (68), Expect = 0.46
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKP--IKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLA 442
PP +P PT P ++P K P + PP + K P P P+ Y+P
Sbjct: 104 PPTYKPPTPTVKPPSVQPPTYKPPTPTVKPP--TTSPVKPPTTPPVQSPPVQPPTYKPPT 161
Query: 441 RPRQSTTIT 415
P + T T
Sbjct: 162 SPVKPPTTT 170
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -1
Query: 612 PACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTP 472
P P P T P +KP T P PP T P P + P
Sbjct: 159 PPTSPVKPPTTTPPVKPPTTTPPVQPPTYNPPTTPVKPPTAPPVKPP 205
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKPIK-WTRPQLPPPLLMSQTKKLPRN---CPTLGTPLTAVLYRP 448
PP +P PT P P+K T P + P + T K P + PT P+ P
Sbjct: 121 PPTYKPPTPTVKPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTPPVKPPTTTP 180
Query: 447 LARP 436
+P
Sbjct: 181 PVQP 184
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 31.1 bits (67), Expect = 0.61
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 299 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 472
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 473 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNA 598
F+ N I+ GG+ R++L+G S GAH+ A
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAHIAACA 244
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 31.1 bits (67), Expect = 0.61
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 299 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 472
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 473 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNA 598
F+ N I+ GG+ R++L+G S GAH+ A
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAHIAACA 244
>At2g37925.1 68415.m04655 copper transporter family protein similar
to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis
thaliana}; contains Pfam profile PF04145: Ctr copper
transporter family; supporting cDNA
gi|18496855|gb|AF466372.1|
Length = 145
Score = 30.7 bits (66), Expect = 0.81
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 329 VIVHGWNSNGNSAVNTMIRPALLAVS-----DCNVIVVDWRGLANGLYNTAV 469
V+V WN+ + T RP+LL + +C V+ W G G+Y A+
Sbjct: 8 VVVEAWNTTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALAL 59
>At3g48050.2 68416.m05239 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 604 SSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
S V N+ A A+++ +P+A+ V +P V E S GN+
Sbjct: 770 SDDVGMNLLASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g48050.1 68416.m05238 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 604 SSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
S V N+ A A+++ +P+A+ V +P V E S GN+
Sbjct: 770 SDDVGMNLLASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -1
Query: 591 PTTCAPKLKPIKWTRPQLPPPLLMSQT-KKLP-RNCPTLGTPL-TAVLYRPLARP 436
P P L P +T+P +PPP+ K P PT+ P+ T +Y+P P
Sbjct: 97 PPVYKPTLSPPVYTKPTIPPPVYTPPVYKPTPVYTKPTIPPPVYTPPVYKPTPSP 151
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -1
Query: 591 PTTCAPKLKPIKWTRPQLPPPL----LMSQTKKLP-RNCPTLGTPL-TAVLYRPLARPRQ 430
P P L P +T+P +PPP+ + T P PT+ P+ T +Y+P P
Sbjct: 49 PPVYKPTLSPPVYTKPTIPPPVYTPPVYKHTPSPPVYTKPTIPPPVYTPPVYKPTLSPPV 108
Query: 429 STTITL 412
T T+
Sbjct: 109 YTKPTI 114
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 27.5 bits (58), Expect(2) = 1.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKPIKWTRPQLPPP 529
PP P LP + P P + P+LPPP
Sbjct: 30 PPLVFPLLPLSPPPSPPPSPSSPPRLPPP 58
Score = 21.0 bits (42), Expect(2) = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 546 PQLPPPLLMSQTKKLPRNCP 487
P+LPPPLL ++ PR P
Sbjct: 86 PRLPPPLL-PPPEEPPREPP 104
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +2
Query: 395 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 574
L+ D V +D+R G + V S F+ N + GG+ R++L+G S
Sbjct: 232 LSERDIIVACIDYRNFPQGSISDMVKDASSGISFVCNHIA----EYGGDPDRIYLMGQSA 287
Query: 575 GAHV 586
GAH+
Sbjct: 288 GAHI 291
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 604 SSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
S V N+ A A+++ +P+A+ V +P + E S GN+
Sbjct: 770 SDDVGMNLLASVAADEMSKSPVASPSVSQPPNSLMNENSTVGNN 813
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +2
Query: 362 SAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLV-----WLIN 526
SA+N+++ A +AV+ V+ W+ LA ++ VP V +F+G F + WL
Sbjct: 181 SAINSLVMCASVAVTYLLGSVISWQKLA------LISTVPCVFEFVGLFFIPESPRWLSR 234
Query: 527 NG 532
NG
Sbjct: 235 NG 236
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 395 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 574
LA D V +D+R G + V+ F+ N I+ GG+ R++L+G S
Sbjct: 176 LAERDIIVACLDYRNFPQGTISDMVSDAAQGISFVCNN----ISAFGGDPNRIYLMGQSA 231
Query: 575 GAHV 586
GAH+
Sbjct: 232 GAHI 235
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = -1
Query: 618 LPPACRP----ALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLP 499
LPPA P A P P KP+K + P PPP + T P
Sbjct: 480 LPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAP 523
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -1
Query: 600 PALPTTCAPKLKPIKW--TRPQLP--PPLLMSQTKKLPRNCPTLGTPLTAV 460
P LPT P L PI T P LP PP+ + LP P+ PL V
Sbjct: 314 PLLPTPPTPTLPPIPTIPTLPPLPVLPPVPIVNPPSLPPPPPSFPVPLPPV 364
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNC--PTLGTPLTAV 460
PPA P P P P K LPPPL QT P P L PL +
Sbjct: 126 PPAITPPPPLATTPPALPPK----PLPPPLSPPQTTPPPPPAITPPLSPPLVGI 175
>At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase, basic
vacuolar isoform precursor SP:P52407 from [Hevea
brasiliensis]
Length = 306
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 227 WLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 373
W +R QN + + +++ S G+LP+ V GW SNG +A +
Sbjct: 222 WDGSRGYQNLFDALLDVVYSAVERSG-GGSLPVVVSESGWPSNGGNAAS 269
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLT 466
P C P PT P + P T P + PP P P + TP T
Sbjct: 160 PTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPPT 209
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 200 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 373
+ NG NN N NN NGN N+ N+N N N +G N+NGN+ N
Sbjct: 87 NNNGNNNN----DNNNGNNKDNNNNGNNNNGNNNNGNDN-------NGNNNNGNNNDN 133
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKPIK-WTRPQLPPP 529
PP+ A+ ++ P LKP++ +RP PPP
Sbjct: 547 PPSAEAAVTSSPLPPLKPLRILSRPPPPPP 576
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKPIK-WTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLAR 439
PP PTT P + + P PPP + + P+ P + +P T P +
Sbjct: 46 PPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVI-SPATPPPQPPQSP 104
Query: 438 PRQSTTIT 415
P + T++
Sbjct: 105 PASAPTVS 112
>At1g26390.1 68414.m03219 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 530
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 13 QHEAPTSAGWLNSIVFWQCYP 75
+HE WLNS +FW YP
Sbjct: 330 KHEDCQEMSWLNSTLFWADYP 350
>At1g07440.1 68414.m00794 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 266
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 592 TDNVRAQAEANQVDSTPIAASVVDEPDQKV 503
+D +RA A A V +TP+A +V D+ +KV
Sbjct: 184 SDGIRANAVAPAVIATPLAEAVYDDEFKKV 213
>At4g21585.1 68417.m03124 bifunctional nuclease, putative similar to
bifunctional nuclease [Zinnia elegans]
gi|4099833|gb|AAD00694
Length = 299
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 164 DLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFV 331
D+ +P L G N + RR N H V N + S + YN +LPL +
Sbjct: 151 DIHQPLHVGFL-GDEGGNTITVRWYRRKTNLHHVWDNMIIESALKTYYNKSLPLMI 205
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1
Query: 618 LPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLT 466
+P P +P T P + P PPP+ M+ +P T +PLT
Sbjct: 57 MPMMTPPPMPMT-PPPMPMTPPPMPMAPPPMPMASPPMMPMTPSTSPSPLT 106
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 27.5 bits (58), Expect = 7.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 40 WLNSIVFWQCYPHDPWRQQ 96
WL+S ++ CYP P+R++
Sbjct: 762 WLSSFLYLSCYPSAPYRRK 780
>At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 579
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -1
Query: 525 LMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGRIMVFTAEFPLLF 346
+ S +KL CP +T +L R L PR + E + T+EFP L+
Sbjct: 397 MTSNERKLAGLCPLNAKEVTRLL-RALGAPRDARIYWAGGEPLGGKEALKPLTSEFPHLY 455
Query: 345 QPWTI 331
+ I
Sbjct: 456 NKYDI 460
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAV 460
PP P P +P P+ P L PP + S + P N P TP V
Sbjct: 648 PPVYSPPPPPVKSPPPPPVY--SPPLLPPKMSSPPTQTPVNSPPPRTPSQTV 697
>At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -3
Query: 286 VDIAICNNLMVVLV---TSGEKPVLVVCTVP*HKDVFLGRFFQVNEVRNTLAIRHPNVSA 116
VD+ + + VL + G P +V+C + H LGRF + +V +L R
Sbjct: 423 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 482
Query: 115 YTF 107
YTF
Sbjct: 483 YTF 485
>At4g28680.1 68417.m04098 tyrosine decarboxylase, putative similar
to SP|P54768 Tyrosine/DOPA decarboxylase 1 [Includes:
DOPA decarboxylase (EC 4.1.1.28) (DDC); Tyrosine
decarboxylase (EC 4.1.1.25)] {Papaver somniferum},
SP|Q06086 Tyrosine decarboxylase 2 (EC 4.1.1.25)
{Petroselinum crispum}; contains Pfam profile PF00282:
Pyridoxal-dependent decarboxylase conserved domain
Length = 545
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 236 TRRNQNNHQVITNGNVNSIRNSNYNGN 316
T +N TNGN ++ N NYNGN
Sbjct: 14 TGNGYSNGNGYTNGNGHTNGNGNYNGN 40
>At4g20160.1 68417.m02949 expressed protein ; expression supported
by MPSS
Length = 1188
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 245 NQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCN 415
N N + N NV +I + + NL +FV H N + +V+ ++ ++ AV +C+
Sbjct: 33 NNNKKKNNNNNNVRNIHVAAFEKNLNVFVRDH--LENCSVSVDDVVDDSIKAVPECS 87
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 379 DPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWSSQCRT 492
D P L ++YC G + SC+ + C SQCR+
Sbjct: 620 DCPCLTNETCCEKYC-GCSKSCKNRFRGCHCAKSQCRS 656
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.1 bits (57), Expect = 10.0
Identities = 22/67 (32%), Positives = 25/67 (37%)
Frame = -1
Query: 615 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
PPA PTT P T PPP + LP + P P L PL +P
Sbjct: 28 PPAASSPPPTTTPSSPPPSPSTNSTSPPP-----SSPLPPSLPPPSPP--GSLTPPLPQP 80
Query: 435 RQSTTIT 415
S IT
Sbjct: 81 SPSAPIT 87
>At2g16650.1 68415.m01911 expressed protein
Length = 511
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 310 WKPASLCYCPRLEQQRKLRCEHH 378
+ PA LC+C +LE ++ E H
Sbjct: 149 YAPALLCFCEKLEAEKGYEVEEH 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,033,321
Number of Sequences: 28952
Number of extensions: 350443
Number of successful extensions: 1507
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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