Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a19r
         (644 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q85JV0 Cluster: NADH dehydrogenase 5; n=1; Diachasmimor...    36   1.1  
UniRef50_A2F2A2 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_A6LYQ2 Cluster: Methyl-accepting chemotaxis sensory tra...    35   1.5  
UniRef50_Q23AV8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_A7BY53 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q16GA0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_A0CJ73 Cluster: Chromosome undetermined scaffold_194, w...    33   5.9  

>UniRef50_Q85JV0 Cluster: NADH dehydrogenase 5; n=1; Diachasmimorpha
           sp. M131|Rep: NADH dehydrogenase 5 - Diachasmimorpha sp.
           M131
          Length = 204

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +2

Query: 188 LFMCLGLYYTSILVFFLLIKKPLLISVYLCYKLYDIINYNIIELSQINILVADPGNVFFF 367
           L M L + YTS L+F++ +K P + +++  Y  ++I+NY+II L  +++      N   F
Sbjct: 21  LSMGLTISYTSRLIFYISMKSPKM-NLFNFYMSWNIMNYSIIILFFMSLFYGSFLNWLMF 79

Query: 368 S-KGKIF 385
           S   KIF
Sbjct: 80  SCMNKIF 86


>UniRef50_A2F2A2 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 279

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 26/79 (32%), Positives = 36/79 (45%)
 Frame = +1

Query: 43  NNFAEIIPNKRIVLETNNNIWI*YKSFDSIHRFILVNSNSQVDIKYKKPFYVFRPILYLD 222
           NN  +I+PNK + +    N W    +FD ++ +           K + P Y FR I   D
Sbjct: 81  NNLEKIVPNKHVFINKEYNNWGAVDNFDEMYSY----------AKNQFPQYEFRRI--RD 128

Query: 223 TSVLLVNKKAAAYKRVSVL 279
             VL VNK A  Y  + VL
Sbjct: 129 DYVLNVNKTAKLYASIKVL 147


>UniRef50_A6LYQ2 Cluster: Methyl-accepting chemotaxis sensory
           transducer; n=1; Clostridium beijerinckii NCIMB
           8052|Rep: Methyl-accepting chemotaxis sensory transducer
           - Clostridium beijerinckii NCIMB 8052
          Length = 570

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 24/78 (30%), Positives = 38/78 (48%)
 Frame = +1

Query: 43  NNFAEIIPNKRIVLETNNNIWI*YKSFDSIHRFILVNSNSQVDIKYKKPFYVFRPILYLD 222
           NNF+E   N   V ET  NI   Y S D     ++ N+ +Q D  Y +    F+  LY+ 
Sbjct: 140 NNFSEADENYSKVTETRKNI---YLSMDE----LIKNNVNQADASYSENNSTFKRSLYIT 192

Query: 223 TSVLLVNKKAAAYKRVSV 276
            S++L++   A    +S+
Sbjct: 193 ISIILISLLLAVILGLSI 210


>UniRef50_Q23AV8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 454

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 49  FAEIIPNKRIVLETNNNIWI*YKSFDSIHRFILVNSNSQVDIKY 180
           FA  IPN  IV  T NN+WI Y+S   I  F  ++ +S + ++Y
Sbjct: 170 FATFIPNINIVQATQNNMWIAYQSDYIIISFNHLSGSSILAVQY 213


>UniRef50_A7BY53 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. PS
          Length = 366

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +2

Query: 170 ILSTRNLFMCLGLYYTSILVFFLLIKKPLLISVYLCYKLYDIINYNIIELSQINILVADP 349
           I S + L    GL+ + + V FL+I  P+  + + C K + +I   I   +Q+N      
Sbjct: 3   INSHKLLIKIFGLFSSFVYVLFLIISPPIAAASFNCSKAHTVIKKTICSNTQLNKADEQL 62

Query: 350 GNVF 361
           G ++
Sbjct: 63  GKIY 66


>UniRef50_Q16GA0 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 168

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 13/45 (28%), Positives = 27/45 (60%)
 Frame = +2

Query: 500 LFNVFFFYLRRNVSNATSKSLSIFKDILRLLNLHTLVIICKQYII 634
           L  VF  +++  +  A +  +SI++ I++L N+  + + C QY+I
Sbjct: 63  LSTVFLAFVKSAIEEANASFISIYRPIVQLRNVPLIALWCYQYVI 107


>UniRef50_A0CJ73 Cluster: Chromosome undetermined scaffold_194, whole
            genome shotgun sequence; n=10; cellular organisms|Rep:
            Chromosome undetermined scaffold_194, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1647

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 35/113 (30%), Positives = 52/113 (46%)
 Frame = +2

Query: 2    ILQTHGKLIYSAFQITLPK*SQTNE*CWKQIIISGYSINLLIPYIDSYW*IQIVK*ILST 181
            +LQT  + I  + Q  L    Q    C KQ +   Y I+ L   ID Y  I I+   L  
Sbjct: 1522 LLQTQNRSINQSNQKNLNSKEQLGILCLKQRVEIRYLIHYLY-IIDKYDFINIIFLCLKF 1580

Query: 182  RNLFMCLGLYYTSILVFFLLIKKPLLISVYLCYKLYDIINYNIIELSQINILV 340
             NL   LG++    L +F+ IK  LLI +Y   +    I  N + +++I I +
Sbjct: 1581 TNLLYKLGIFK---LYYFIFIK--LLIYIYKIIQFK--IQSNDLNITEIYIYI 1626


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,030,388
Number of Sequences: 1657284
Number of extensions: 11156300
Number of successful extensions: 26069
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26055
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)