Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a19f
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061575-1|AAL29123.1|  428|Drosophila melanogaster SD02746p pro...   165   6e-41
AE013599-703|AAM68833.2|  428|Drosophila melanogaster CG14767-PA...   165   6e-41
AF317419-1|AAK69597.1|  432|Drosophila melanogaster lysosomal-as...   162   4e-40
AE013599-705|AAF59049.3|  432|Drosophila melanogaster CG14767-PC...   162   4e-40
AE013599-704|AAF59050.2|  432|Drosophila melanogaster CG14767-PB...   162   4e-40
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ...    29   4.3  
BT021444-1|AAX33592.1|  667|Drosophila melanogaster GH02866p pro...    29   4.3  
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    29   4.3  
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA...    29   4.3  
AE013599-3350|AAF46812.1|  667|Drosophila melanogaster CG6758-PA...    29   4.3  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    29   4.3  
AE014298-2696|AAF48822.1|  116|Drosophila melanogaster CG15061-P...    29   7.5  

>AY061575-1|AAL29123.1|  428|Drosophila melanogaster SD02746p
           protein.
          Length = 428

 Score =  165 bits (400), Expect = 6e-41
 Identities = 82/163 (50%), Positives = 111/163 (68%)
 Frame = +1

Query: 175 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 354
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 355 WSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI 534
              V  +   LPTPLS VE    PY+       DHSL Y + D+G +V    +A+TL+MI
Sbjct: 90  ---VDLSAPALPTPLSKVEP---PYAYR-----DHSLNYQNFDMGGLVCTCMIAITLMMI 138

Query: 535 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 663
           YG  +GKP++LLPFFCLQ+FDFAIT LTA GYLCYL+ IH++I
Sbjct: 139 YGTIKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSII 181


>AE013599-703|AAM68833.2|  428|Drosophila melanogaster CG14767-PA,
           isoform A protein.
          Length = 428

 Score =  165 bits (400), Expect = 6e-41
 Identities = 82/163 (50%), Positives = 111/163 (68%)
 Frame = +1

Query: 175 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 354
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 355 WSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI 534
              V  +   LPTPLS VE    PY+       DHSL Y + D+G +V    +A+TL+MI
Sbjct: 90  ---VDLSAPALPTPLSKVEP---PYAYR-----DHSLNYQNFDMGGLVCTCMIAITLMMI 138

Query: 535 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 663
           YG  +GKP++LLPFFCLQ+FDFAIT LTA GYLCYL+ IH++I
Sbjct: 139 YGTIKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSII 181


>AF317419-1|AAK69597.1|  432|Drosophila melanogaster
           lysosomal-associated transmembraneprotein protein.
          Length = 432

 Score =  162 bits (393), Expect = 4e-40
 Identities = 79/163 (48%), Positives = 111/163 (68%)
 Frame = +1

Query: 175 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 354
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 355 WSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI 534
              V  +   LPTPLS VE    PY+ +  H  ++   Y + D+G +V    +A+TL+MI
Sbjct: 90  ---VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMI 142

Query: 535 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 663
           YG  +GKP++LLPFFCLQ+FDFAIT LTA GYLCYL+ IH++I
Sbjct: 143 YGTIKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSII 185


>AE013599-705|AAF59049.3|  432|Drosophila melanogaster CG14767-PC,
           isoform C protein.
          Length = 432

 Score =  162 bits (393), Expect = 4e-40
 Identities = 79/163 (48%), Positives = 111/163 (68%)
 Frame = +1

Query: 175 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 354
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 355 WSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI 534
              V  +   LPTPLS VE    PY+ +  H  ++   Y + D+G +V    +A+TL+MI
Sbjct: 90  ---VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMI 142

Query: 535 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 663
           YG  +GKP++LLPFFCLQ+FDFAIT LTA GYLCYL+ IH++I
Sbjct: 143 YGTIKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSII 185


>AE013599-704|AAF59050.2|  432|Drosophila melanogaster CG14767-PB,
           isoform B protein.
          Length = 432

 Score =  162 bits (393), Expect = 4e-40
 Identities = 79/163 (48%), Positives = 111/163 (68%)
 Frame = +1

Query: 175 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 354
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 355 WSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI 534
              V  +   LPTPLS VE    PY+ +  H  ++   Y + D+G +V    +A+TL+MI
Sbjct: 90  ---VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMI 142

Query: 535 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 663
           YG  +GKP++LLPFFCLQ+FDFAIT LTA GYLCYL+ IH++I
Sbjct: 143 YGTIKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSII 185


>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
           variegation protein3-7 protein.
          Length = 1169

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 485 WVRWLQWVPWL 517
           W+RWL+W PWL
Sbjct: 216 WLRWLRWHPWL 226


>BT021444-1|AAX33592.1|  667|Drosophila melanogaster GH02866p
           protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -3

Query: 388 AVHLQCAPHCSMNSLGMTHGPVHPAIEDHAQSLLKLLVPLGAGTGAMIP 242
           AVH+ C P C +N+  +  GP  P +    Q + +  VP+  G G   P
Sbjct: 320 AVHMWCNPGCKVNNYLVVVGP-SPNMPQDFQMMKQSRVPVVGGRGPPPP 367


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p
           protein.
          Length = 1233

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 299 CVILDCWMNWTVSHPQ*VHGAMWGALEMYCPHHCQ 403
           CV   C  N T SHP+ V+G  W   + YC HH Q
Sbjct: 203 CVRHAC--NMTESHPKDVYGFEW-ICKTYCEHHEQ 234


>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
           protein.
          Length = 1250

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 485 WVRWLQWVPWL 517
           W+RWL+W PWL
Sbjct: 297 WLRWLRWHPWL 307


>AE013599-3350|AAF46812.1|  667|Drosophila melanogaster CG6758-PA
           protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -3

Query: 388 AVHLQCAPHCSMNSLGMTHGPVHPAIEDHAQSLLKLLVPLGAGTGAMIP 242
           AVH+ C P C +N+  +  GP  P +    Q + +  VP+  G G   P
Sbjct: 320 AVHMWCNPGCKVNNYLVVVGP-SPNMPQDFQMMKQSRVPVVGGRGPPPP 367


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
           protein.
          Length = 1233

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 299 CVILDCWMNWTVSHPQ*VHGAMWGALEMYCPHHCQ 403
           CV   C  N T SHP+ V+G  W   + YC HH Q
Sbjct: 203 CVRHAC--NMTESHPKDVYGFEW-ICKTYCEHHEQ 234


>AE014298-2696|AAF48822.1|  116|Drosophila melanogaster CG15061-PA
           protein.
          Length = 116

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = +3

Query: 339 IPSEFMEQCGAHWRCT---AHTTVKCGNSSQPIL----STCF 443
           I S  +++CG HW CT       VK  + + P L    STCF
Sbjct: 68  INSPVVQRCGGHWACTPLGMSMIVKISSQAAPSLAGDSSTCF 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,295,397
Number of Sequences: 53049
Number of extensions: 735784
Number of successful extensions: 2764
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2745
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)