Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a18f
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   6.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.5  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   8.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 313 RCPAGDPGQSERSVLGSVPDTLAP 384
           RCP+G+   SER+ L     TL+P
Sbjct: 97  RCPSGESMLSERAALLRGVPTLSP 120


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +1

Query: 415 DRPIR*NPVLGR-RLRGHLEGYGAARQRGSGQEHRSLQLQLEAAGEVAAARDCQAGRQSG 591
           ++P   +   GR R R HL  +      G  +  R+    + AAG+ AAAR       +G
Sbjct: 244 EKPFECDKCRGRFRRRHHLVHHKCG---GEEEAERAPAPAVRAAGDAAAARGAARADGAG 300

Query: 592 G 594
           G
Sbjct: 301 G 301


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +3

Query: 501 WSRASESPTSTRSSWRGCCSTRLSSRSSIRWNVILTSTRNASR 629
           W R    P    +  R CC   ++  + IR ++ L+  +   R
Sbjct: 598 WRRNFHGPHRLAARSRRCCYHAVAPGTDIRQSIALSRKKKCIR 640


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +3

Query: 501 WSRASESPTSTRSSWRGCCSTRLSSRSSIRWNVILTSTRNASR 629
           W R    P    +  R CC   ++  + IR ++ L+  +   R
Sbjct: 490 WRRNFHGPHRLAARSRRCCYHAVAPGTDIRQSIALSRKKKCIR 532


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 76  NYSRIWIRNVEVEARRG 126
           NY  + + N+EV+A+ G
Sbjct: 426 NYPGVTVTNIEVQAKGG 442


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 126 TSPGFDFHVPNPNT 85
           +SPG D++ PN N+
Sbjct: 23  SSPGTDYYNPNANS 36


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 126 TSPGFDFHVPNPNT 85
           +SPG D++ PN N+
Sbjct: 23  SSPGTDYYNPNANS 36


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 126 TSPGFDFHVPNPNT 85
           +SPG D++ PN N+
Sbjct: 23  SSPGTDYYNPNANS 36


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -3

Query: 386 PGASVSGTDPSTERSDCPGSPAGHRAPSPGDETCSTVSKL 267
           PG  + G    +  S   G PAG++     + T  T ++L
Sbjct: 42  PGLGLHGLPVDSLHSSMAGYPAGNQRKQRRERTTFTRAQL 81


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 126 TSPGFDFHVPNPNT 85
           +SPG D++ PN N+
Sbjct: 23  SSPGTDYYNPNANS 36


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 126 TSPGFDFHVPNPNT 85
           +SPG D++ PN N+
Sbjct: 23  SSPGTDYYNPNANS 36


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 126 TSPGFDFHVPNPNT 85
           +SPG D++ PN N+
Sbjct: 23  SSPGTDYYNPNANS 36


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 126 TSPGFDFHVPNPNT 85
           +SPG D++ PN N+
Sbjct: 23  SSPGTDYYNPNANS 36


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 126 TSPGFDFHVPNPNT 85
           +SPG D++ PN N+
Sbjct: 23  SSPGTDYYNPNANS 36


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 96  NPNTGIVSPLLNVT 55
           NPN    +PL+NVT
Sbjct: 476 NPNPSEENPLINVT 489


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,829
Number of Sequences: 336
Number of extensions: 3536
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)