Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a18f
(634 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 196 3e-51
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 194 1e-50
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 130 1e-31
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 112 3e-26
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 103 2e-23
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 68 1e-12
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 44 1e-05
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 36 0.005
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.32
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 29 0.42
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 0.97
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 28 1.3
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 28 1.3
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 27 1.7
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 27 3.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.0
SPAC23H3.03c |||nitrogen permease regulator family|Schizosacchar... 27 3.0
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 26 3.9
SPBC839.03c |||neddylation protein Dcn1|Schizosaccharomyces pomb... 26 3.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 3.9
SPAC9E9.17c |||dubiuos|Schizosaccharomyces pombe|chr 1|||Manual 26 5.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.9
SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma sub... 25 9.1
SPAC12B10.07 |acp1||F-actin capping protein alpha subunit|Schizo... 25 9.1
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 9.1
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 25 9.1
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 25 9.1
SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces po... 25 9.1
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 196 bits (477), Expect = 3e-51
Identities = 93/191 (48%), Positives = 124/191 (64%)
Frame = +2
Query: 59 TFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKE 238
T +G IP GLGTW+S+P + AVK A+ GYRHID A +YGNE EVG+ I KE
Sbjct: 17 TLADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGI----KE 72
Query: 239 GVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPT 418
V R+D+++TSKLW H P+ V AL++TL +L + YLD YLIHWP ++K FP
Sbjct: 73 SGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPK 132
Query: 419 DQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVEC 598
D+ G + + +TWKAME L++ G V+ IG+SNFN LER+L+ A VKP V+Q+E
Sbjct: 133 DKDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDTNLERILKVAKVKPAVHQMEL 192
Query: 599 HPYLNQKRLKE 631
HP+L Q E
Sbjct: 193 HPFLPQTEFVE 203
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 194 bits (472), Expect = 1e-50
Identities = 92/191 (48%), Positives = 127/191 (66%)
Frame = +2
Query: 59 TFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKE 238
T NG+ IP GLGTW+S E AV A+ GYRHID A++YGNEKE+GE I +E
Sbjct: 16 TLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGI----RE 71
Query: 239 GVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPT 418
V R D+++TSKLW HR LV AL++TL +LN++Y+D YLIHWP A P
Sbjct: 72 SGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEELPR 131
Query: 419 DQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVEC 598
++ G++ + DV +TW+AME L++ G V+ IG+SNFN++ L+R+L+ A VKP ++Q+E
Sbjct: 132 NEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMEL 191
Query: 599 HPYLNQKRLKE 631
HPYL Q E
Sbjct: 192 HPYLPQTEYLE 202
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 130 bits (315), Expect = 1e-31
Identities = 92/212 (43%), Positives = 118/212 (55%), Gaps = 8/212 (3%)
Frame = +2
Query: 23 IISKMAPKIPVVTFNNGETIPVFGLGT--WKSKPGEVTQ----AVKDAIDIGYRHIDCAY 184
+I+ M PKIPV P +G+GT +K + GE+ + +VK+A+ G+ HIDCA
Sbjct: 2 LIAAMGPKIPV---------PAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAE 52
Query: 185 VYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDL 364
VYGNE+EVG A+ KE V R LFITSK+ H D + AL E+L L YLDL
Sbjct: 53 VYGNEEEVGVAL----KEANVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDL 105
Query: 365 YLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQL 544
YL+H P + E KI S+ WKAME + GLV S+GVSNF L
Sbjct: 106 YLLHSPIPFYEK----------KIPISE-----GWKAMETALGTGLVHSVGVSNFRIPDL 150
Query: 545 ERLLQHATVKPVVNQVECHP--YLNQKRLKEF 634
E LL+ +T+ P VNQ+E HP Y K L EF
Sbjct: 151 EELLKTSTITPRVNQIEFHPQVYKAAKPLVEF 182
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 112 bits (270), Expect = 3e-26
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Frame = +2
Query: 26 ISKMAPKIPVVTFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKE 205
+S+ + VT NG IP G G + K E V A+D GYRHID A VYGNE
Sbjct: 1 MSESQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDI 60
Query: 206 VGEAITSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQ 385
G+AI ++ V R D+F+TSKL N R A++ +L +L Y+DL+LI P
Sbjct: 61 CGKAIVDWCEKNNVKRTDIFLTSKLANCSDYYS-TRAAIRSSLHHLGT-YIDLFLIQSPA 118
Query: 386 AYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERL-LQH 562
K+ + +WKAME V G ++S+GVSN+ K L+ L +
Sbjct: 119 GGKK------------------SRIASWKAMEEFVDSGDIRSVGVSNYGVKHLQELYASN 160
Query: 563 ATVKPVVNQVECHPYLNQKRLKEF 634
P VNQ+E HP+L+Q + ++
Sbjct: 161 PKFYPCVNQIELHPFLSQDDIVKY 184
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 103 bits (248), Expect = 2e-23
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 1/194 (0%)
Frame = +2
Query: 56 VTFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 235
V NNG P F G++ + +V A+ GYRHID A +Y NE + G AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 236 EGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 415
E RED++ TSKL N ++ ++ + Y+DL+L+H P
Sbjct: 66 ETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSPYG--------- 115
Query: 416 TDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLL-QHATVKPVVNQV 592
D +++WKA+E V+EG +++IGVSNF ++ LL H + P VNQ+
Sbjct: 116 ------------DRIESWKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQI 163
Query: 593 ECHPYLNQKRLKEF 634
E HP+ +Q+++ ++
Sbjct: 164 ELHPFCSQQKVVDY 177
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 68.1 bits (159), Expect = 1e-12
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Frame = +2
Query: 131 QAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV-VTREDLFITSKLWNTFHRPDL 307
Q V +A+ +G R ID A Y NEKE +AI + V + RED+ + +K+ ++ +
Sbjct: 28 QQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQGFER 87
Query: 308 VRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPL 487
A++++L LD+ LIH P+ +P V +++W+A+
Sbjct: 88 TWKAVEQSLRRTGRPKLDVVLIHSPK--------WP-----------VRRIESWRALLQH 128
Query: 488 VKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVECHPYLNQ 616
KEG + IGVSN+N LE ++ P +NQVE + N+
Sbjct: 129 QKEGRINKIGVSNYNIHHLEEIISLGLPLPAINQVEFSAFNNR 171
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 44.4 bits (100), Expect = 1e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 455 YVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQV 592
+VDTWK +E V EG + ++GVS F +L+RL+ V P Q+
Sbjct: 158 WVDTWKLLEEKVGEGKIGTLGVSEFGVNELQRLISSVNVVPESTQI 203
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 35.9 bits (79), Expect = 0.005
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Frame = +2
Query: 68 NGETIPVFGLGTWKSKPGE------VTQAVKDAIDIGYRHIDCAYVYGN---EKEVGEAI 220
+G + F LG W + E +K A D+G D A +Y N E +G+AI
Sbjct: 21 SGLKVSAFSLGGWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAI 80
Query: 221 TS---KIKEGVVTREDLF-ITSKLWNT--FHRPDLVRGALQETLDNLNVQYLDLYLIHWP 382
E V+T + F +KL NT R ++ G L +L L + Y+D+ + H P
Sbjct: 81 KELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEG-LNASLKRLGLPYVDVIMAHRP 139
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.9 bits (64), Expect = 0.32
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +3
Query: 372 YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRG 551
Y+G + A S T S TS + TP S SS S +S+S +S++SS
Sbjct: 123 YSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSS 182
Query: 552 CCSTRLSSRSS 584
S++ SS SS
Sbjct: 183 SSSSKSSSSSS 193
Score = 29.5 bits (63), Expect = 0.42
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 396 KTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCSTRLSS 575
K++ SS+ ++ SSS++S + + S SS S++S SP+S++SS + S+ ++S
Sbjct: 171 KSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSS-SKSSASPSSSKSSSKFSSSSFITS 229
Query: 576 ---RSSIRWNVILTSTRNAS 626
SS I+++ + AS
Sbjct: 230 TTPASSSSSGAIVSNAKTAS 249
Score = 29.1 bits (62), Expect = 0.56
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +3
Query: 375 TGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGC 554
T T ++ SS ++ SSS++S + S SSK S +S S +S+ SS
Sbjct: 148 TSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSK 207
Query: 555 CS-TRLSSRSSIRW--NVILTSTRNASRS 632
S + SS+SS ++ + +TST AS S
Sbjct: 208 SSASPSSSKSSSKFSSSSFITSTTPASSS 236
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 29.5 bits (63), Expect = 0.42
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Frame = +2
Query: 47 IPVVTFNNGETIPVFGLGT------WKSKPGEVTQAV-KDAIDIGYRHIDCAYVYG---N 196
IP N +T+P G G + E QAV A D+G D + +YG N
Sbjct: 3 IPTRKIGN-DTVPAIGFGCMGLHAMYGPSSEEANQAVLTHAADLGCTFWDSSDMYGFGAN 61
Query: 197 EKEVGEAI--TSKIKE-GVVTR---EDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYL 358
E+ +G T + KE + T+ E T +L + + PD + AL +L L + +
Sbjct: 62 EECIGRWFKQTGRRKEIFLATKFGYEKNPETGEL-SLNNEPDYIEKALDLSLKRLGIDCI 120
Query: 359 DLYLIH 376
DLY +H
Sbjct: 121 DLYYVH 126
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 28.3 bits (60), Expect = 0.97
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 402 ALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSS 542
A SS T+ V SSS+ S + + L S SS + S +S SPTS+ SS
Sbjct: 75 ASSSFITSLVSSSSQQSSS-SSASLTSSSSATLTSSSSASPTSSSSS 120
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 62 FNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVY 190
FN+GE +P+F L W+ G + + G +D Y
Sbjct: 1979 FNHGEQLPLFILANWRGFSGGQRDMFNEVLKYGSYIVDALASY 2021
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 266 ITSKLWNTFHRPDLVRGALQET----LDNLNV-QYLDLYLIH 376
+ S+ W T H+ L RGAL E +DN V +Y+ Y I+
Sbjct: 640 VISRTWKTAHKNKLQRGALPEDEGSGVDNFRVKRYVSKYTIN 681
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 27.9 bits (59), Expect = 1.3
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 263 FITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHW 379
+ + + + R +L++ L E L + LD+Y +HW
Sbjct: 123 YFSKEYLTAYRRSELLQNKLHEYQKKLITRVLDMYQLHW 161
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 1.7
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = +2
Query: 425 SGKIQFSDVDYVDTWKAMEPLVK 493
S +++F+ +DY+ W+A+ P+ +
Sbjct: 162 SQRVEFARLDYIKVWRALAPIYR 184
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 408 SSRPTNQVKSSSRTSITWTPGRLWSRSSK 494
SS+ ++ VK +S S TWTP L SK
Sbjct: 321 SSKHSSPVKGNSSISSTWTPSNLKIYHSK 349
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 3.0
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 399 TALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCSTRLSSR 578
++LSS P N + + ++ + T + S SS S +S +P S+ S+ S+R SS
Sbjct: 710 SSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSS-SSSSYTPASSTSTTTSSVSSRQSSS 768
Query: 579 SS 584
SS
Sbjct: 769 SS 770
>SPAC23H3.03c |||nitrogen permease regulator
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 26.6 bits (56), Expect = 3.0
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +2
Query: 527 FNSKQLERLLQHATVKPVVNQVECHPYLNQKRLK 628
F + RL+ T+K ++ +V +PYL ++ ++
Sbjct: 327 FKGLDVRRLISFGTIKGLIYRVHKYPYLERRTMR 360
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 381 PRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRS 539
P P + T +S +PT + ++ R S++ SR+S R S ++ S S+ S
Sbjct: 528 PSPLQNTVISPQPTRRSRTPIR-SLSGRSSVASSRNSSRTRSYSNVSSASSNS 579
>SPBC839.03c |||neddylation protein Dcn1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 263 FITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 409
F+ S FHR V GAL L ++ L L + Q ++ D SL
Sbjct: 97 FLKSPRMGEFHRESFVEGAL--NLSTTSLDQLKLAIKEKVQVWRSDASL 143
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 399 TALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTS-TRSSWRGCCSTRLSS 575
++++ PT+ + S+S +S T + S+ + + S+ PT+ T S +T +
Sbjct: 345 SSIALNPTSSISSTSSSSSTSSAISTISQDHTKTVTSVSDEPTTITASGATSVTTTTKTD 404
Query: 576 RSSIRWNVILTST 614
++ ++ TST
Sbjct: 405 FDTVTTTIVSTST 417
>SPAC9E9.17c |||dubiuos|Schizosaccharomyces pombe|chr 1|||Manual
Length = 72
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 274 RSYEQIFPRYDSFLNFAGYSFSDFLLVSVNIGTVDVSVANVN 149
RS E + D LN +F+DF ++N+G + +S N
Sbjct: 29 RSREFSVIQKDEELNVLEINFNDFYRTTLNVGELSMSTRKTN 70
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 6.9
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 TALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCST-RLSS 575
++LSS ++ SSS +S + S SS S S +S+ SS ST SS
Sbjct: 252 SSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSS 311
Query: 576 RSSIRWNVILTSTRNASRS 632
SS ++ L+S+ +S S
Sbjct: 312 SSSSSFSSTLSSSSMSSSS 330
>SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma
subunit Gcd10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 462
Score = 25.0 bits (52), Expect = 9.1
Identities = 26/98 (26%), Positives = 43/98 (43%)
Frame = +2
Query: 302 DLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAME 481
D V G + TL + N Q L +W Q +KED + Q G ++ +++ E
Sbjct: 211 DRVAGDCKITLVHPNEQPNSSCLEYWGQDFKEDSLV----QKGILK--TLNWYQVTNPTE 264
Query: 482 PLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVE 595
L E V+ I S N +L ++ T K N+++
Sbjct: 265 TL-SEYSVEDIPESELNEMKLRHRKRYETKKATFNRLK 301
>SPAC12B10.07 |acp1||F-actin capping protein alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 107 KSKPGEVTQAVKDAIDIG 160
+S PGEV Q V D DIG
Sbjct: 12 ESPPGEVNQVVHDIRDIG 29
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 235 LNFAGYSFSDFLLVSVNIGTVDVSVA 158
LNF YSF LL+ N GT D +++
Sbjct: 1443 LNFHDYSFDQQLLLHENSGTWDSALS 1468
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 25.0 bits (52), Expect = 9.1
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = -2
Query: 381 GQCIRYRSKY*TFRLSRVSCRAPRTKSGR*NVFHSFEVMNRSSLVTTPSLILLVIASPTS 202
G C+RY + Y + S P T S + F S+ TT + + +S TS
Sbjct: 28 GSCVRYTTIYSSGSSEFTSTITPETPSSSSSTFVPISTHTSSATNTTSGQLSISSSSSTS 87
Query: 201 FSF 193
+
Sbjct: 88 SEY 90
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +2
Query: 329 TLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKE 496
T +++ +Y++L H P K L PT+ +I + +Y A L+ +
Sbjct: 44 TANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAANALLSD 99
>SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 508
Score = 25.0 bits (52), Expect = 9.1
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +2
Query: 320 LQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVK-- 493
+ E + + V +L + + DG++ P D I D+D+ A+E L
Sbjct: 51 VSERSNKIQVNLNNLKAVESALGAEIDGAILPPDLIKTISTGDMDHPSWNSALEKLTSFL 110
Query: 494 EGLVKSIGVSN-FNSKQLER 550
EG + N FNS Q+ +
Sbjct: 111 EGGEDDSSLGNMFNSLQINK 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,705,332
Number of Sequences: 5004
Number of extensions: 58238
Number of successful extensions: 252
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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