Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a18f
(634 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 239 1e-63
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 196 9e-51
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 105 4e-23
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 61 6e-10
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.048
SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 31 0.78
SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_55890| Best HMM Match : Filamin (HMM E-Value=0.02) 31 1.0
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 30 1.8
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 30 1.8
SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62) 29 2.4
SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 3.1
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 29 4.1
SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 29 4.1
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 4.1
SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08) 28 5.5
SB_48670| Best HMM Match : AT_hook (HMM E-Value=3) 28 7.2
SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38) 28 7.2
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_41989| Best HMM Match : RVT_1 (HMM E-Value=1.2e-33) 28 7.2
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_29735| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.7) 28 7.2
SB_18890| Best HMM Match : OCIA (HMM E-Value=6.3) 28 7.2
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 28 7.2
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_14707| Best HMM Match : A_deamin (HMM E-Value=0) 27 9.6
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 27 9.6
SB_47739| Best HMM Match : WCCH (HMM E-Value=3.5) 27 9.6
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 27 9.6
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 239 bits (585), Expect = 1e-63
Identities = 112/190 (58%), Positives = 138/190 (72%)
Frame = +2
Query: 56 VTFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 235
V NNG +PV GLGTWKSKPG+V AVK AI GYRHIDCAY Y NEKEVG+A+ ++
Sbjct: 4 VKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALR-ELL 62
Query: 236 EGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 415
VV R+DLFITSKLWNT H P VR ++L +L + YLDLYLIHWP ++++ FP
Sbjct: 63 GSVVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFP 122
Query: 416 TDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVE 595
D+ G + ++ D DTWKAME LV EGLVK+IG+SNFNSKQ++ + A +KPV NQVE
Sbjct: 123 KDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQVE 182
Query: 596 CHPYLNQKRL 625
CHP LNQ +L
Sbjct: 183 CHPLLNQAKL 192
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 196 bits (479), Expect = 9e-51
Identities = 96/178 (53%), Positives = 125/178 (70%)
Frame = +2
Query: 101 TWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKL 280
TW+S EV AV+ AI++GYRHIDCA +YGNE E+GEA++ + EG V RE+LF+TSKL
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL 118
Query: 281 WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYV 460
W H PD V A Q TL NL + YLDLYLIH P A+K+ L + G I ++
Sbjct: 119 WCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQ 178
Query: 461 DTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEF 634
+TW+AME LV +GL K+IGVSNF+ K+L +LL+ A++ P NQVE HPYL Q++LKEF
Sbjct: 179 NTWQAMEGLVAKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEF 236
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 95 LGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 259
L TW S G+V AV+ A ++GYR IDCA ++GNE GEA++ + +G V RE+
Sbjct: 4 LCTWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE 55
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 105 bits (251), Expect = 4e-23
Identities = 71/190 (37%), Positives = 99/190 (52%)
Frame = +2
Query: 65 NNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 244
N+G IP+ GLG QAV A++ GYR ID A Y NE+ VGEA+
Sbjct: 71 NDGRKIPLLGLGAHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVRCSN---- 123
Query: 245 VTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQ 424
+ R ++++ +K++ T H A ++L L + Y+DLYLIH+P
Sbjct: 124 IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFPVP------------ 171
Query: 425 SGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVECHP 604
SG V +W+AM L GL++SIGVSNFN + LE L Q V P VNQ+E HP
Sbjct: 172 SG--------VVGSWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHP 223
Query: 605 YLNQKRLKEF 634
+L K L ++
Sbjct: 224 FLQMKELTQY 233
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 87.0 bits (206), Expect = 1e-17
Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 2/195 (1%)
Frame = +2
Query: 56 VTFNNGETIPVFGLGTWKSKPGEVT-QAVKDAIDIGYRHIDCAYVYG-NEKEVGEAITSK 229
V +G T+PV G GT + GE T VK A++ GYR ID A Y +E +V +AI
Sbjct: 329 VLLASGYTMPVMGFGT--ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAIA-- 384
Query: 230 IKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 409
+ + R+D+FI +KL + + +++ +L L+ Y+DL+LIH K
Sbjct: 385 --DSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH----SKTCDDF 438
Query: 410 FPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQ 589
T G+ + + + ++WKAME L ++G ++S+GVSNFN +L+ L+ ATV Q
Sbjct: 439 LLTCAEGEPRGT---WKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAVQ 495
Query: 590 VECHPYLNQKRLKEF 634
P+ ++ + F
Sbjct: 496 NWFDPFHQDRKARRF 510
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 80.6 bits (190), Expect = 1e-15
Identities = 53/163 (32%), Positives = 87/163 (53%)
Frame = +2
Query: 146 AIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQ 325
A+ GYR +D A +Y NEKEVG A+ K G + RED+++T+KL + +
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR---KSG-LKREDIYVTTKLKPSEEGHSNALKYAK 108
Query: 326 ETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLV 505
E++ L++ Y+DL+LIH P + G I + + A+ L +EGL+
Sbjct: 109 ESIKKLDIGYVDLFLIHTP-------------RPGNI-------IAAYDALLTLKEEGLI 148
Query: 506 KSIGVSNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEF 634
+S+GVSNF LE L + P +NQ+E +P+ Q+ + ++
Sbjct: 149 RSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKY 191
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 61.3 bits (142), Expect = 6e-10
Identities = 35/95 (36%), Positives = 52/95 (54%)
Frame = +2
Query: 59 TFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKE 238
T ++G IP FGLG + QAV A++ GYR ID A Y NEK VGEA ++E
Sbjct: 2 TLSDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEA----LRE 57
Query: 239 GVVTREDLFITSKLWNTFHRPDLVRGALQETLDNL 343
V R ++++ +K+++T H + A +L L
Sbjct: 58 SAVPRSEVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 35.1 bits (77), Expect = 0.048
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +3
Query: 384 RPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCST 563
R +T+LSSR ++ + SR G+ SRS +S S S + +R RG +
Sbjct: 637 RSRSRTSLSSRSRSRDRGGSRR------GKRRSRSRSSSYSSRSRSRSRSRDRGRGRKRS 690
Query: 564 RLSSRSSIRWNVILTSTRNASRS 632
R SRSS + L+ +R+ SRS
Sbjct: 691 RRRSRSSSHSSSSLSRSRSRSRS 713
>SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 377 WPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLL 556
W + E SLFP + Y TW++++P + + K I + SK ER+
Sbjct: 69 WSFDWDEGASLFPDFFPRSTTAKTLSYEVTWRSLDPAKEYSMAKDIFRDSILSKDTERIE 128
Query: 557 QHATVKPVV 583
+ K ++
Sbjct: 129 PDSEAKQII 137
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +2
Query: 440 FSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVE 595
+SD Y+D + L EG ++ I ++NF++ +++ + H +K NQ++
Sbjct: 32 YSDKRYLDALLHLSELQSEGKIQEISLTNFDTNRMQEITDHG-IKISSNQIQ 82
>SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 31.9 bits (69), Expect = 0.45
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +2
Query: 125 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 304
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 260 VPEKITNIIRKSYEEMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 319
Query: 305 LVRGALQETLDNL--NVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 436
R +Q TL ++ + DL L+ Q ++ + D S K+
Sbjct: 320 QKRNGIQWTLWKQLDDLDFADLALLFHTQQQMQEKTNIVADNSAKL 365
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 375 TGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWR 548
T PR R+T LS R + S+ S T + +++RV E+PTS+ +SW+
Sbjct: 208 TSPRQKRETLLSRRRSTGESSTQEDS---TGDDTSTSATERVRRAVLEAPTSSENSWK 262
>SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 477 WSRSSKRVWSRASESPTSTRSSWRGCCSTRLSSRSS 584
W +W R+ + T RS W G C T L ++ S
Sbjct: 1014 WDAIHSELWLRSQGTQTKRRSPWTGICRTFLQAKFS 1049
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -3
Query: 410 RESRLPCRPGASVSGTD--PSTERSDCPGSPAGHRAPSPGDETCSTVS 273
R+ P R G+ T+ PS RSD S G S GDE ST+S
Sbjct: 151 RKHSTPARTGSQRESTERVPSVSRSDTSSSLTGSSPASLGDELESTLS 198
>SB_55890| Best HMM Match : Filamin (HMM E-Value=0.02)
Length = 264
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 49 SCSDVQQWRNYSRIWIRNVEVEARRGDAG 135
S SD+Q ++SR+WI++V+++ RR G
Sbjct: 150 SRSDIQPAGDFSRLWIQSVDMDGRRKSFG 178
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 323 QETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGL 502
+++L+ L + +DLYL+HW G++ +T A LV EG+
Sbjct: 49 EKSLERLGIDRIDLYLLHW---------------EGRVPLE-----ETVDAFRELVDEGM 88
Query: 503 VKSIGVSNFN-SKQLERLLQHATV 571
+ GVSN + LE +HA++
Sbjct: 89 IARWGVSNLDLGDPLESTCRHASL 112
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 338 NLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIG 517
NL + +L LI + KE + +G++ D WKAMEP V+ + + I
Sbjct: 376 NLPLDHLQQKLIQETEKLKEIAPHLTQEAAGQVPVVAGRPKDVWKAMEPEVRATVQEHIA 435
Query: 518 VSNFNSKQLE 547
S LE
Sbjct: 436 RDEGESPSLE 445
>SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62)
Length = 1105
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +3
Query: 384 RPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCST 563
+PTR + + + N + +R S T GR + + R+ S +E S T
Sbjct: 620 KPTRLSNTTEKGRNVILKPTRLSNTTEKGRNYRANPTRL-SNTTEKGRKVISK-----PT 673
Query: 564 RLSSRSSIRWNVILTSTR 617
RLS+ WN+ L STR
Sbjct: 674 RLSNTKEQGWNIRLKSTR 691
>SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 375 TGPRPTRKTALSSRPTNQVKSSSR--TSITWTPGRLWSRSSKRVWSRASESPTSTR 536
T +++++ + RPT++ + SR T WTPGR + +R + +PT R
Sbjct: 127 TAEDTSKESSKAKRPTSRPRPPSRLLTKRAWTPGRRTPFACRRAPTPGRRTPTPGR 182
>SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 761
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 107 KSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 235
KS P G + V A + YRH +Y++G++ EV T +K
Sbjct: 6 KSHPIGTIAVGVAIAAAVYYRHSIKSYIFGDDNEVSALATCVVK 49
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 377 SVSGTDPSTERSDCPGSPAGHRAPSP 300
S S T PS RSD P +P G AP P
Sbjct: 594 SSSHTAPSRGRSDSPPTPEGRGAPPP 619
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +3
Query: 372 YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRG 551
Y + +R+ SSR T++ +S R+ P R WSRS S +S S + T W
Sbjct: 323 YRALQRSRQHKPSSRNTSRSRSPVRSRSPIHP-RSWSRSVSHSLSHSSASRSPTPEDWD- 380
Query: 552 CCSTRLSSRSSIRWNVILTSTRNASR 629
+R SRS + TS + SR
Sbjct: 381 --RSRTPSRSPTPDSRSQTSNGDKSR 404
>SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 639
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 233 KEGVVTREDLFITSK-LWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 409
K+ V +DLF+ L N RPDL + E V DL+L+ PQA + S
Sbjct: 35 KKTQVDSKDLFLLQMPLANESWRPDLSKIKFPEIPKKTPVDAKDLFLLRMPQA---NESW 91
Query: 410 FPTDQSGKIQFSDVD 454
P D S KI+F+ V+
Sbjct: 92 MP-DLS-KIKFAQVE 104
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 98 GTWKSKPGEVTQAVKDAIDIGYRHIDCA 181
G+W + P +VT ++ +D+G RH+ CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
>SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 149 IDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLW----NTFHRPDLVRG 316
I++ Y+H +C+ + + S +++G + LF+ + W T +P ++
Sbjct: 104 IELFYQHFECSVILDGHLSEWFPVNSGVRQGCIISPLLFLLAIDWIMRNTTADKPRGIQW 163
Query: 317 ALQETLDNLNVQY 355
L L++L+ Y
Sbjct: 164 TLTSQLEDLDFAY 176
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 425 IGRSGRESRLPCRPGASVSGTDPSTERSDCPGSPAGHRAPS--PGDETCSTVS 273
+G S + + G SVSG P+++ PG P+ PS P E S+ +
Sbjct: 1330 LGFSASGNSWSTQDGMSVSGLTPNSQPWAAPGGPSSSSTPSSDPSAEAASSTA 1382
>SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +2
Query: 125 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 304
V++ + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 726 VSEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 785
Query: 305 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 436
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 786 QKRNGIQWTLWKQLDDLDFAD-DLALLSHTQQQMQEKTNIVADNSARL 832
>SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08)
Length = 421
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +2
Query: 125 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 304
V++ + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 82 VSEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 141
Query: 305 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 436
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 142 QKRNGIQWTLWKQLDDLDFAD-DLALLSHTQQQMQEKTNIVADNSARL 188
>SB_48670| Best HMM Match : AT_hook (HMM E-Value=3)
Length = 207
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 413 PTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 520
P + K + SD+ +V T ++P+ E LV ++GV
Sbjct: 142 PNTKEAKARESDIHFVVTLTVVQPVDTEALVMALGV 177
>SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38)
Length = 492
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +2
Query: 125 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 304
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 154 VPEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 213
Query: 305 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 436
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 214 QKRNGIQWTLWKQLDDLDFAN-DLALLSHTQQQMQEKTNIVADNSARL 260
>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = +2
Query: 386 AYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHA 565
AY + G F Q K + SD+ V T ++P+ E L ++GVS KQ HA
Sbjct: 1146 AYSKHG--FTRSQLPKARESDIPLVVTLTVVQPVDTEALGMTLGVS---LKQKLSATDHA 1200
Query: 566 TVKPVVNQVE 595
+ V N E
Sbjct: 1201 LLFRVSNHAE 1210
>SB_41989| Best HMM Match : RVT_1 (HMM E-Value=1.2e-33)
Length = 585
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +2
Query: 125 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 304
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 222 VPEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 281
Query: 305 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 436
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 282 QKRNGIQWTLWKQLDDLDFAN-DLALLSHTQQQMQEKTNIVADNSARL 328
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/90 (27%), Positives = 42/90 (46%)
Frame = +3
Query: 363 CT*YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSS 542
CT + +R ++ SS + SSS +S + + G S SS + S S +S+ SS
Sbjct: 115 CTSSSSSNSSRSSSSSSNSNSNSSSSSSSSSSSSSGS--SSSSNSNSNSNSNSSSSSNSS 172
Query: 543 WRGCCSTRLSSRSSIRWNVILTSTRNASRS 632
++ SS SS N S+ +++ S
Sbjct: 173 SNSNSNSSSSSNSSSNSNSSSNSSSSSNSS 202
>SB_29735| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.7)
Length = 211
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 94 SKYGNSFSIVERHYRNFRRHFTNY 23
SK ++ +++ERH R FR +F NY
Sbjct: 57 SKSDSAATMLERHRRGFRSYFYNY 80
>SB_18890| Best HMM Match : OCIA (HMM E-Value=6.3)
Length = 310
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 188 YGNEKEVGEAITSKIKEG-VVTREDLFITSK-LWNTFHRPDLVRGALQETLDNLNVQY 355
+G+ KE + + + +++ ED+F+ + + FHR +V+ + T D +++QY
Sbjct: 92 FGSRKEKAQVEETTTDQACIISAEDMFLPRQSISQRFHRLYVVKKLPEGTTDGVSIQY 149
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 354 TWICT*YTGPRPTRKTALSSRP 419
T C YTGP+PT T SRP
Sbjct: 2219 TPFCRPYTGPKPTGPTPTPSRP 2240
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 293 HRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 436
HR + T ++L++Q LYL HW KE L+ T + KI
Sbjct: 27 HRLSIKNKVATNTANSLSIQE-QLYLDHWKNNRKEKKPLYYTMLASKI 73
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 387 PTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPT 527
P+R + SR T + +S SRT TP SR+S R +R T
Sbjct: 178 PSRTSTPRSRLTPRSRSRSRTITPSTPSTTSSRASSRGSARGGAKTT 224
>SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)
Length = 1243
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 478 GAARQRGSGQEHRSLQLQLEAAGEVAAARDCQAGRQSGGMSSLPQP--ETPQ 627
G Q G GQ R L + G +RD QA GG S P P E PQ
Sbjct: 696 GVPMQTGDGQLQRGTLLLQQTRGSAPQSRD-QAMPLYGGPSGSPSPRFEGPQ 746
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +3
Query: 378 GPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCC 557
G PTRK +P + SSS +S + + +S SS S S S S+RSS
Sbjct: 994 GRSPTRKDK-KDKPARRQSSSSSSSSSSSGSSSYSSSS----STGSSSSGSSRSSSSSSS 1048
Query: 558 STRLSSRSS 584
+ SS SS
Sbjct: 1049 GSSASSSSS 1057
>SB_47739| Best HMM Match : WCCH (HMM E-Value=3.5)
Length = 932
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +2
Query: 38 APKIPVVTFNNGETIPVFGLGTWKSKPGE-VTQAVKDAIDIGYRHIDCAYVYGNEKEVGE 214
AP P+ GE +G K G+ + + ID G R Y+ ++ E
Sbjct: 189 APAEPLAPITEGEGRSEHKIGGSLVKRGDQIAVGALEGIDAGIREKGREYLVYTRGKILE 248
Query: 215 AITSKIKEGVVTREDLFITSK 277
K+ T+EDLF K
Sbjct: 249 RFDKKLATTGCTKEDLFEMGK 269
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +3
Query: 378 GPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCC 557
GPR + KT+ + P KSS +TS T + ++S++ AS TS R+S +
Sbjct: 125 GPRTSPKTSSKTSPKTSPKSSPKTS-PKTSSKTSLKTSQKTSLNASRK-TSRRTSLKRSL 182
Query: 558 ST 563
T
Sbjct: 183 KT 184
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,874,836
Number of Sequences: 59808
Number of extensions: 463900
Number of successful extensions: 1814
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1804
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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