Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a17r
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.4  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 145 YLKKSGNIRHDWLKYKECVHKCIKKLQELIL 237
           Y+ KS   R D   YK+ +HK   +++E ++
Sbjct: 463 YVPKSLRGRKDEADYKDKLHKVAPRIKERMM 493


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 600 PQCVKLKYVSMNYXVIVNICISGFFFSVL 686
           P C   K       + +N CI G+ FS +
Sbjct: 29  PVCSSQKGQKTCLNLSINYCICGYIFSAI 57


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 427 YC*FILVKYFIHFILFLFEYF 365
           YC FI+    + F+L ++ +F
Sbjct: 150 YCAFIIFTVHLLFLLCIYHFF 170



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = -3

Query: 496 IMFTSH*VVYVIGS*WRQNNILTYC*FILVKYFIHFILFLFEYF 365
           I+FT H ++ V    +   ++L  C FI+    + F+L ++ ++
Sbjct: 246 ILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFY 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,394
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)